Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC41.66■■■■■ 4.26
ABCA6Q8N139 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC41.65■■■■■ 4.26
ABCA6Q8N139 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC41.64■■■■■ 4.26
ABCA6Q8N139 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC41.64■■■■■ 4.26
ABCA6Q8N139 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC41.63■■■■■ 4.25
ABCA6Q8N139 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC41.62■■■■■ 4.25
ABCA6Q8N139 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC41.61■■■■■ 4.25
ABCA6Q8N139 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC41.6■■■■■ 4.25
ABCA6Q8N139 RPS2-209ENST00000529806 993 ntTSL 3 BASIC41.6■■■■■ 4.25
ABCA6Q8N139 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC41.59■■■■■ 4.25
ABCA6Q8N139 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC41.58■■■■■ 4.25
ABCA6Q8N139 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
ABCA6Q8N139 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
ABCA6Q8N139 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC41.57■■■■■ 4.25
ABCA6Q8N139 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC41.56■■■■■ 4.24
ABCA6Q8N139 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC41.54■■■■■ 4.24
ABCA6Q8N139 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC41.54■■■■■ 4.24
ABCA6Q8N139 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC41.52■■■■■ 4.24
ABCA6Q8N139 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
ABCA6Q8N139 WASH5P-204ENST00000632292 975 ntBASIC41.51■■■■■ 4.24
ABCA6Q8N139 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
ABCA6Q8N139 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC41.5■■■■■ 4.23
ABCA6Q8N139 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC41.49■■■■■ 4.23
ABCA6Q8N139 MIR4449-201ENST00000578365 66 ntBASIC41.49■■■■■ 4.23
ABCA6Q8N139 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
ABCA6Q8N139 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
ABCA6Q8N139 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC41.46■■■■■ 4.23
ABCA6Q8N139 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC41.46■■■■■ 4.23
ABCA6Q8N139 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC41.45■■■■■ 4.23
ABCA6Q8N139 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC41.44■■■■■ 4.22
ABCA6Q8N139 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC41.43■■■■■ 4.22
ABCA6Q8N139 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC41.43■■■■■ 4.22
ABCA6Q8N139 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC41.41■■■■■ 4.22
ABCA6Q8N139 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC41.4■■■■■ 4.22
ABCA6Q8N139 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC41.39■■■■■ 4.22
ABCA6Q8N139 MACF1-219ENST00000484793 834 ntTSL 2 BASIC41.38■■■■■ 4.21
ABCA6Q8N139 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC41.38■■■■■ 4.21
ABCA6Q8N139 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
ABCA6Q8N139 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
ABCA6Q8N139 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC41.36■■■■■ 4.21
ABCA6Q8N139 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
ABCA6Q8N139 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC41.36■■■■■ 4.21
ABCA6Q8N139 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
ABCA6Q8N139 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC41.32■■■■■ 4.2
ABCA6Q8N139 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
ABCA6Q8N139 DUX4L29-201ENST00000425409 679 ntBASIC41.29■■■■■ 4.2
ABCA6Q8N139 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC41.26■■■■■ 4.2
ABCA6Q8N139 MIR639-201ENST00000384974 98 ntBASIC41.26■■■■■ 4.2
ABCA6Q8N139 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
ABCA6Q8N139 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC41.24■■■■■ 4.19
ABCA6Q8N139 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC41.22■■■■■ 4.19
ABCA6Q8N139 AC021231.2-201ENST00000594613 730 ntBASIC41.21■■■■■ 4.19
ABCA6Q8N139 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC41.2■■■■■ 4.19
ABCA6Q8N139 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC41.19■■■■■ 4.18
ABCA6Q8N139 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC41.19■■■■■ 4.18
ABCA6Q8N139 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC41.18■■■■■ 4.18
ABCA6Q8N139 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC41.16■■■■■ 4.18
ABCA6Q8N139 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
ABCA6Q8N139 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC41.15■■■■■ 4.18
ABCA6Q8N139 HSD17B1P1-201ENST00000590052 955 ntBASIC41.15■■■■■ 4.18
ABCA6Q8N139 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC41.15■■■■■ 4.18
ABCA6Q8N139 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC41.14■■■■■ 4.18
ABCA6Q8N139 RNF166-209ENST00000567844 633 ntTSL 5 BASIC41.14■■■■■ 4.18
ABCA6Q8N139 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC41.13■■■■■ 4.17
ABCA6Q8N139 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC41.12■■■■■ 4.17
ABCA6Q8N139 CR559946.2-201ENST00000623684 991 ntBASIC41.11■■■■■ 4.17
ABCA6Q8N139 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC41.11■■■■■ 4.17
ABCA6Q8N139 AC016575.1-201ENST00000607026 382 ntBASIC41.1■■■■■ 4.17
ABCA6Q8N139 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC41.09■■■■■ 4.17
ABCA6Q8N139 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
ABCA6Q8N139 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC41.08■■■■■ 4.17
ABCA6Q8N139 GDI1-215ENST00000630693 786 ntTSL 4 BASIC41.08■■■■■ 4.17
ABCA6Q8N139 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC41.08■■■■■ 4.17
ABCA6Q8N139 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC41.07■■■■■ 4.17
ABCA6Q8N139 MIR3648-2-201ENST00000581792 180 ntBASIC41.07■■■■■ 4.16
ABCA6Q8N139 MIR3648-1-201ENST00000615959 180 ntBASIC41.07■■■■■ 4.16
ABCA6Q8N139 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC41.04■■■■■ 4.16
ABCA6Q8N139 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC41.03■■■■■ 4.16
ABCA6Q8N139 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
ABCA6Q8N139 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC40.99■■■■■ 4.15
ABCA6Q8N139 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC40.98■■■■■ 4.15
ABCA6Q8N139 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC40.97■■■■■ 4.15
ABCA6Q8N139 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC40.97■■■■■ 4.15
ABCA6Q8N139 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC40.96■■■■■ 4.15
ABCA6Q8N139 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
ABCA6Q8N139 CALM3-209ENST00000597743 577 ntTSL 4 BASIC40.95■■■■■ 4.15
ABCA6Q8N139 BRD4-212ENST00000630599 726 ntTSL 2 BASIC40.94■■■■■ 4.14
ABCA6Q8N139 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC40.93■■■■■ 4.14
ABCA6Q8N139 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC40.92■■■■■ 4.14
ABCA6Q8N139 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC40.91■■■■■ 4.14
ABCA6Q8N139 MIR6090-201ENST00000622481 60 ntBASIC40.91■■■■■ 4.14
ABCA6Q8N139 CIB2-204ENST00000557846 934 ntTSL 3 BASIC40.9■■■■■ 4.14
ABCA6Q8N139 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC40.9■■■■■ 4.14
ABCA6Q8N139 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC40.89■■■■■ 4.14
ABCA6Q8N139 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC40.89■■■■■ 4.14
ABCA6Q8N139 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
ABCA6Q8N139 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC40.89■■■■■ 4.14
ABCA6Q8N139 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC40.88■■■■■ 4.13
ABCA6Q8N139 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC40.87■■■■■ 4.13
ABCA6Q8N139 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC40.86■■■■■ 4.13
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms