Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
XRN1Q8IZH2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC39.01■■■■□ 3.84
XRN1Q8IZH2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC39■■■■□ 3.83
XRN1Q8IZH2 ZNRF2P2-203ENST00000454624 420 ntBASIC39■■■■□ 3.83
XRN1Q8IZH2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC39■■■■□ 3.83
XRN1Q8IZH2 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC39■■■■□ 3.83
XRN1Q8IZH2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC38.99■■■■□ 3.83
XRN1Q8IZH2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC38.99■■■■□ 3.83
XRN1Q8IZH2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
XRN1Q8IZH2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC38.95■■■■□ 3.83
XRN1Q8IZH2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC38.95■■■■□ 3.83
XRN1Q8IZH2 WASH5P-204ENST00000632292 975 ntBASIC38.94■■■■□ 3.82
XRN1Q8IZH2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC38.94■■■■□ 3.82
XRN1Q8IZH2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
XRN1Q8IZH2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC38.92■■■■□ 3.82
XRN1Q8IZH2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC38.91■■■■□ 3.82
XRN1Q8IZH2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
XRN1Q8IZH2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
XRN1Q8IZH2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC38.89■■■■□ 3.82
XRN1Q8IZH2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC38.88■■■■□ 3.81
XRN1Q8IZH2 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC38.85■■■■□ 3.81
XRN1Q8IZH2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC38.85■■■■□ 3.81
XRN1Q8IZH2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC38.83■■■■□ 3.81
XRN1Q8IZH2 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC38.82■■■■□ 3.81
XRN1Q8IZH2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
XRN1Q8IZH2 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC38.79■■■■□ 3.8
XRN1Q8IZH2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
XRN1Q8IZH2 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC38.79■■■■□ 3.8
XRN1Q8IZH2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC38.79■■■■□ 3.8
XRN1Q8IZH2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC38.78■■■■□ 3.8
XRN1Q8IZH2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC38.78■■■■□ 3.8
XRN1Q8IZH2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
XRN1Q8IZH2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC38.77■■■■□ 3.8
XRN1Q8IZH2 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
XRN1Q8IZH2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC38.76■■■■□ 3.8
XRN1Q8IZH2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC38.76■■■■□ 3.8
XRN1Q8IZH2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
XRN1Q8IZH2 MIR4449-201ENST00000578365 66 ntBASIC38.73■■■■□ 3.79
XRN1Q8IZH2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC38.72■■■■□ 3.79
XRN1Q8IZH2 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
XRN1Q8IZH2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC38.69■■■■□ 3.78
XRN1Q8IZH2 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
XRN1Q8IZH2 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
XRN1Q8IZH2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
XRN1Q8IZH2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC38.67■■■■□ 3.78
XRN1Q8IZH2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC38.67■■■■□ 3.78
XRN1Q8IZH2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
XRN1Q8IZH2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC38.65■■■■□ 3.78
XRN1Q8IZH2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
XRN1Q8IZH2 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
XRN1Q8IZH2 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
XRN1Q8IZH2 DUX4L29-201ENST00000425409 679 ntBASIC38.6■■■■□ 3.77
XRN1Q8IZH2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
XRN1Q8IZH2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC38.59■■■■□ 3.77
XRN1Q8IZH2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
XRN1Q8IZH2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
XRN1Q8IZH2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC38.56■■■■□ 3.76
XRN1Q8IZH2 MIR639-201ENST00000384974 98 ntBASIC38.54■■■■□ 3.76
XRN1Q8IZH2 AC021231.2-201ENST00000594613 730 ntBASIC38.53■■■■□ 3.76
XRN1Q8IZH2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC38.52■■■■□ 3.76
XRN1Q8IZH2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.76
XRN1Q8IZH2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC38.51■■■■□ 3.75
XRN1Q8IZH2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.75
XRN1Q8IZH2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
XRN1Q8IZH2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC38.5■■■■□ 3.75
XRN1Q8IZH2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC38.49■■■■□ 3.75
XRN1Q8IZH2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
XRN1Q8IZH2 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
XRN1Q8IZH2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
XRN1Q8IZH2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC38.44■■■■□ 3.74
XRN1Q8IZH2 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
XRN1Q8IZH2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
XRN1Q8IZH2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC38.43■■■■□ 3.74
XRN1Q8IZH2 CR559946.2-201ENST00000623684 991 ntBASIC38.42■■■■□ 3.74
XRN1Q8IZH2 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
XRN1Q8IZH2 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC38.38■■■■□ 3.73
XRN1Q8IZH2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC38.38■■■■□ 3.73
XRN1Q8IZH2 MIR3648-2-201ENST00000581792 180 ntBASIC38.37■■■■□ 3.73
XRN1Q8IZH2 AC016575.1-201ENST00000607026 382 ntBASIC38.37■■■■□ 3.73
XRN1Q8IZH2 MIR3648-1-201ENST00000615959 180 ntBASIC38.37■■■■□ 3.73
XRN1Q8IZH2 HSD17B1P1-201ENST00000590052 955 ntBASIC38.36■■■■□ 3.73
XRN1Q8IZH2 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC38.36■■■■□ 3.73
XRN1Q8IZH2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
XRN1Q8IZH2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
XRN1Q8IZH2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC38.33■■■■□ 3.73
XRN1Q8IZH2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC38.32■■■■□ 3.73
XRN1Q8IZH2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC38.32■■■■□ 3.73
XRN1Q8IZH2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC38.32■■■■□ 3.72
XRN1Q8IZH2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC38.31■■■■□ 3.72
XRN1Q8IZH2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC38.3■■■■□ 3.72
XRN1Q8IZH2 MIR6090-201ENST00000622481 60 ntBASIC38.29■■■■□ 3.72
XRN1Q8IZH2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC38.27■■■■□ 3.72
XRN1Q8IZH2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC38.26■■■■□ 3.72
XRN1Q8IZH2 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
XRN1Q8IZH2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC38.24■■■■□ 3.71
XRN1Q8IZH2 AC108673.1-201ENST00000510422 1159 ntBASIC38.24■■■■□ 3.71
XRN1Q8IZH2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC38.24■■■■□ 3.71
XRN1Q8IZH2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC38.22■■■■□ 3.71
XRN1Q8IZH2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC38.22■■■■□ 3.71
XRN1Q8IZH2 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC38.22■■■■□ 3.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms