Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SWSAP1Q6NVH7 HNRNPLP2-201ENST00000568980 1570 ntBASIC30.51■■■□□ 2.47
SWSAP1Q6NVH7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC30.51■■■□□ 2.47
SWSAP1Q6NVH7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SWSAP1Q6NVH7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SWSAP1Q6NVH7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SWSAP1Q6NVH7 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.5■■■□□ 2.47
SWSAP1Q6NVH7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.49■■■□□ 2.47
SWSAP1Q6NVH7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.48■■■□□ 2.47
SWSAP1Q6NVH7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC30.46■■■□□ 2.47
SWSAP1Q6NVH7 AP006261.1-201ENST00000584783 668 ntBASIC30.46■■■□□ 2.47
SWSAP1Q6NVH7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
SWSAP1Q6NVH7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
SWSAP1Q6NVH7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SWSAP1Q6NVH7 AL162393.1-201ENST00000437852 946 ntBASIC30.45■■■□□ 2.47
SWSAP1Q6NVH7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SWSAP1Q6NVH7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SWSAP1Q6NVH7 MIR762-201ENST00000390236 83 ntBASIC30.43■■■□□ 2.46
SWSAP1Q6NVH7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
SWSAP1Q6NVH7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SWSAP1Q6NVH7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SWSAP1Q6NVH7 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.41■■■□□ 2.46
SWSAP1Q6NVH7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.4■■■□□ 2.46
SWSAP1Q6NVH7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC30.37■■■□□ 2.45
SWSAP1Q6NVH7 AC120057.4-201ENST00000624722 1615 ntBASIC30.36■■■□□ 2.45
SWSAP1Q6NVH7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC30.34■■■□□ 2.45
SWSAP1Q6NVH7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.34■■■□□ 2.45
SWSAP1Q6NVH7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SWSAP1Q6NVH7 MIR3665-201ENST00000578708 105 ntBASIC30.33■■■□□ 2.45
SWSAP1Q6NVH7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SWSAP1Q6NVH7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.33■■■□□ 2.45
SWSAP1Q6NVH7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
SWSAP1Q6NVH7 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.32■■■□□ 2.44
SWSAP1Q6NVH7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SWSAP1Q6NVH7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
SWSAP1Q6NVH7 AC005559.1-201ENST00000589661 871 ntBASIC30.3■■■□□ 2.44
SWSAP1Q6NVH7 DUX4L28-201ENST00000623687 678 ntBASIC30.3■■■□□ 2.44
SWSAP1Q6NVH7 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
SWSAP1Q6NVH7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.28■■■□□ 2.44
SWSAP1Q6NVH7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
SWSAP1Q6NVH7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SWSAP1Q6NVH7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SWSAP1Q6NVH7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
SWSAP1Q6NVH7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
SWSAP1Q6NVH7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
SWSAP1Q6NVH7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
SWSAP1Q6NVH7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
SWSAP1Q6NVH7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SWSAP1Q6NVH7 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SWSAP1Q6NVH7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
SWSAP1Q6NVH7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SWSAP1Q6NVH7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SWSAP1Q6NVH7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SWSAP1Q6NVH7 AC087741.3-201ENST00000624270 1347 ntBASIC30.21■■■□□ 2.43
SWSAP1Q6NVH7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SWSAP1Q6NVH7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
SWSAP1Q6NVH7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
SWSAP1Q6NVH7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.19■■■□□ 2.42
SWSAP1Q6NVH7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SWSAP1Q6NVH7 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SWSAP1Q6NVH7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.18■■■□□ 2.42
SWSAP1Q6NVH7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
SWSAP1Q6NVH7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
SWSAP1Q6NVH7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SWSAP1Q6NVH7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
SWSAP1Q6NVH7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.15■■■□□ 2.42
SWSAP1Q6NVH7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
SWSAP1Q6NVH7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SWSAP1Q6NVH7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SWSAP1Q6NVH7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
SWSAP1Q6NVH7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
SWSAP1Q6NVH7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
SWSAP1Q6NVH7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
SWSAP1Q6NVH7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.1■■■□□ 2.41
SWSAP1Q6NVH7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.1■■■□□ 2.41
SWSAP1Q6NVH7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SWSAP1Q6NVH7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.08■■■□□ 2.41
SWSAP1Q6NVH7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SWSAP1Q6NVH7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
SWSAP1Q6NVH7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
SWSAP1Q6NVH7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.06■■■□□ 2.4
SWSAP1Q6NVH7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SWSAP1Q6NVH7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
SWSAP1Q6NVH7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
SWSAP1Q6NVH7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.04■■■□□ 2.4
SWSAP1Q6NVH7 AC044849.2-201ENST00000606596 710 ntBASIC30.04■■■□□ 2.4
SWSAP1Q6NVH7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SWSAP1Q6NVH7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SWSAP1Q6NVH7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SWSAP1Q6NVH7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SWSAP1Q6NVH7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SWSAP1Q6NVH7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
SWSAP1Q6NVH7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.99■■■□□ 2.39
SWSAP1Q6NVH7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SWSAP1Q6NVH7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SWSAP1Q6NVH7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SWSAP1Q6NVH7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SWSAP1Q6NVH7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.97■■■□□ 2.39
SWSAP1Q6NVH7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
SWSAP1Q6NVH7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 1187 ms