Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
CTGFP29279 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CTGFP29279 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CTGFP29279 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CTGFP29279 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC31.69■■■□□ 2.66
CTGFP29279 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CTGFP29279 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.68■■■□□ 2.66
CTGFP29279 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.68■■■□□ 2.66
CTGFP29279 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.68■■■□□ 2.66
CTGFP29279 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.67■■■□□ 2.66
CTGFP29279 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
CTGFP29279 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.66■■■□□ 2.66
CTGFP29279 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.64■■■□□ 2.66
CTGFP29279 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
CTGFP29279 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.63■■■□□ 2.65
CTGFP29279 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
CTGFP29279 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CTGFP29279 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
CTGFP29279 MIR4449-201ENST00000578365 66 ntBASIC31.58■■■□□ 2.65
CTGFP29279 WASH5P-204ENST00000632292 975 ntBASIC31.58■■■□□ 2.65
CTGFP29279 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CTGFP29279 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CTGFP29279 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CTGFP29279 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CTGFP29279 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
CTGFP29279 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
CTGFP29279 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CTGFP29279 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CTGFP29279 DUX4L29-201ENST00000425409 679 ntBASIC31.51■■■□□ 2.63
CTGFP29279 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.5■■■□□ 2.63
CTGFP29279 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
CTGFP29279 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CTGFP29279 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
CTGFP29279 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.47■■■□□ 2.63
CTGFP29279 MIR639-201ENST00000384974 98 ntBASIC31.47■■■□□ 2.63
CTGFP29279 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CTGFP29279 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CTGFP29279 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.46■■■□□ 2.63
CTGFP29279 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.45■■■□□ 2.63
CTGFP29279 AC021231.2-201ENST00000594613 730 ntBASIC31.45■■■□□ 2.63
CTGFP29279 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.44■■■□□ 2.62
CTGFP29279 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
CTGFP29279 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CTGFP29279 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CTGFP29279 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.41■■■□□ 2.62
CTGFP29279 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CTGFP29279 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CTGFP29279 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.39■■■□□ 2.62
CTGFP29279 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CTGFP29279 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CTGFP29279 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CTGFP29279 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CTGFP29279 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CTGFP29279 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.33■■■□□ 2.61
CTGFP29279 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CTGFP29279 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.33■■■□□ 2.61
CTGFP29279 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.33■■■□□ 2.61
CTGFP29279 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CTGFP29279 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CTGFP29279 AC016575.1-201ENST00000607026 382 ntBASIC31.31■■■□□ 2.6
CTGFP29279 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CTGFP29279 MIR3648-2-201ENST00000581792 180 ntBASIC31.3■■■□□ 2.6
CTGFP29279 MIR3648-1-201ENST00000615959 180 ntBASIC31.3■■■□□ 2.6
CTGFP29279 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CTGFP29279 HSD17B1P1-201ENST00000590052 955 ntBASIC31.29■■■□□ 2.6
CTGFP29279 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CTGFP29279 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.28■■■□□ 2.6
CTGFP29279 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
CTGFP29279 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
CTGFP29279 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CTGFP29279 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
CTGFP29279 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CTGFP29279 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.26■■■□□ 2.59
CTGFP29279 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CTGFP29279 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CTGFP29279 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.23■■■□□ 2.59
CTGFP29279 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CTGFP29279 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.22■■■□□ 2.59
CTGFP29279 MIR6090-201ENST00000622481 60 ntBASIC31.22■■■□□ 2.59
CTGFP29279 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.2■■■□□ 2.59
CTGFP29279 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.2■■■□□ 2.59
CTGFP29279 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.19■■■□□ 2.58
CTGFP29279 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.18■■■□□ 2.58
CTGFP29279 CR559946.2-201ENST00000623684 991 ntBASIC31.17■■■□□ 2.58
CTGFP29279 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CTGFP29279 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CTGFP29279 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.15■■■□□ 2.58
CTGFP29279 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
CTGFP29279 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CTGFP29279 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CTGFP29279 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CTGFP29279 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
CTGFP29279 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.11■■■□□ 2.57
CTGFP29279 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CTGFP29279 DUX4L11-201ENST00000611504 1267 ntBASIC31.11■■■□□ 2.57
CTGFP29279 DUX4L12-201ENST00000614593 1267 ntBASIC31.11■■■□□ 2.57
CTGFP29279 DUX4L14-201ENST00000621227 1267 ntBASIC31.11■■■□□ 2.57
CTGFP29279 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
CTGFP29279 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CTGFP29279 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms