Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SCG2P13521 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.42■■■□□ 2.62
SCG2P13521 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SCG2P13521 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SCG2P13521 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SCG2P13521 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SCG2P13521 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.38■■■□□ 2.61
SCG2P13521 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.38■■■□□ 2.61
SCG2P13521 WASH5P-204ENST00000632292 975 ntBASIC31.38■■■□□ 2.61
SCG2P13521 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SCG2P13521 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCG2P13521 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCG2P13521 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
SCG2P13521 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SCG2P13521 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
SCG2P13521 CAHM-201ENST00000604200 896 ntBASIC31.34■■■□□ 2.61
SCG2P13521 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.33■■■□□ 2.61
SCG2P13521 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SCG2P13521 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC31.32■■■□□ 2.6
SCG2P13521 AL391121.1-201ENST00000607967 1349 ntBASIC31.3■■■□□ 2.6
SCG2P13521 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SCG2P13521 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC31.3■■■□□ 2.6
SCG2P13521 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
SCG2P13521 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SCG2P13521 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SCG2P13521 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCG2P13521 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.26■■■□□ 2.59
SCG2P13521 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SCG2P13521 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCG2P13521 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
SCG2P13521 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.25■■■□□ 2.59
SCG2P13521 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCG2P13521 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.22■■■□□ 2.59
SCG2P13521 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SCG2P13521 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SCG2P13521 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SCG2P13521 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCG2P13521 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SCG2P13521 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.2■■■□□ 2.58
SCG2P13521 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC31.19■■■□□ 2.58
SCG2P13521 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.18■■■□□ 2.58
SCG2P13521 SUZ12P1-203ENST00000578195 985 ntBASIC31.18■■■□□ 2.58
SCG2P13521 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SCG2P13521 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
SCG2P13521 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.14■■■□□ 2.58
SCG2P13521 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
SCG2P13521 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC31.13■■■□□ 2.57
SCG2P13521 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
SCG2P13521 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.11■■■□□ 2.57
SCG2P13521 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
SCG2P13521 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC31.1■■■□□ 2.57
SCG2P13521 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SCG2P13521 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.09■■■□□ 2.57
SCG2P13521 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
SCG2P13521 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCG2P13521 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCG2P13521 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SCG2P13521 AL161658.1-201ENST00000623641 1967 ntBASIC31.06■■■□□ 2.56
SCG2P13521 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.06■■■□□ 2.56
SCG2P13521 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.06■■■□□ 2.56
SCG2P13521 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.05■■■□□ 2.56
SCG2P13521 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
SCG2P13521 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
SCG2P13521 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCG2P13521 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCG2P13521 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SCG2P13521 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
SCG2P13521 DENR-202ENST00000455982 1052 ntTSL 5 BASIC31.01■■■□□ 2.55
SCG2P13521 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.01■■■□□ 2.55
SCG2P13521 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SCG2P13521 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31■■■□□ 2.55
SCG2P13521 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SCG2P13521 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31■■■□□ 2.55
SCG2P13521 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SCG2P13521 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.99■■■□□ 2.55
SCG2P13521 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SCG2P13521 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.99■■■□□ 2.55
SCG2P13521 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
SCG2P13521 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SCG2P13521 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.98■■■□□ 2.55
SCG2P13521 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SCG2P13521 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
SCG2P13521 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.96■■■□□ 2.55
SCG2P13521 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.95■■■□□ 2.55
SCG2P13521 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCG2P13521 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SCG2P13521 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SCG2P13521 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SCG2P13521 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCG2P13521 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SCG2P13521 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.93■■■□□ 2.54
SCG2P13521 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SCG2P13521 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC30.92■■■□□ 2.54
SCG2P13521 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SCG2P13521 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SCG2P13521 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
SCG2P13521 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.9■■■□□ 2.54
SCG2P13521 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
SCG2P13521 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
SCG2P13521 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms