Protein–RNA interactions for Protein: P08779

KRT16, Keratin, type I cytoskeletal 16, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT16P08779 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
KRT16P08779 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KRT16P08779 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
KRT16P08779 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
KRT16P08779 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.71■■□□□ 1.87
KRT16P08779 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
KRT16P08779 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.87
KRT16P08779 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KRT16P08779 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
KRT16P08779 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
KRT16P08779 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
KRT16P08779 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.68■■□□□ 1.86
KRT16P08779 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
KRT16P08779 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
KRT16P08779 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.65■■□□□ 1.86
KRT16P08779 AC120057.4-201ENST00000624722 1615 ntBASIC26.65■■□□□ 1.86
KRT16P08779 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.64■■□□□ 1.85
KRT16P08779 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
KRT16P08779 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
KRT16P08779 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KRT16P08779 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KRT16P08779 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
KRT16P08779 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KRT16P08779 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
KRT16P08779 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.6■■□□□ 1.85
KRT16P08779 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 ZNRF2P1-201ENST00000441407 443 ntBASIC26.59■■□□□ 1.85
KRT16P08779 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRT16P08779 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
KRT16P08779 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
KRT16P08779 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT16P08779 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT16P08779 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KRT16P08779 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.56■■□□□ 1.84
KRT16P08779 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
KRT16P08779 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
KRT16P08779 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.56■■□□□ 1.84
KRT16P08779 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
KRT16P08779 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
KRT16P08779 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KRT16P08779 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
KRT16P08779 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
KRT16P08779 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
KRT16P08779 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.53■■□□□ 1.84
KRT16P08779 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.53■■□□□ 1.84
KRT16P08779 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
KRT16P08779 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
KRT16P08779 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
KRT16P08779 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
KRT16P08779 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
KRT16P08779 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
KRT16P08779 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.47■■□□□ 1.83
KRT16P08779 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
KRT16P08779 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
KRT16P08779 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.46■■□□□ 1.83
KRT16P08779 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.45■■□□□ 1.82
KRT16P08779 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
KRT16P08779 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
KRT16P08779 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
KRT16P08779 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
KRT16P08779 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.41■■□□□ 1.82
KRT16P08779 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
KRT16P08779 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.39■■□□□ 1.82
KRT16P08779 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.39■■□□□ 1.82
KRT16P08779 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.39■■□□□ 1.82
KRT16P08779 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
KRT16P08779 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KRT16P08779 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
KRT16P08779 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.37■■□□□ 1.81
KRT16P08779 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.37■■□□□ 1.81
KRT16P08779 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.36■■□□□ 1.81
KRT16P08779 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
KRT16P08779 AC135731.1-201ENST00000569415 2548 ntBASIC26.35■■□□□ 1.81
KRT16P08779 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
KRT16P08779 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.34■■□□□ 1.81
KRT16P08779 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
KRT16P08779 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT16P08779 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
KRT16P08779 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.32■■□□□ 1.8
KRT16P08779 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.31■■□□□ 1.8
KRT16P08779 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
KRT16P08779 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT16P08779 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.3■■□□□ 1.8
KRT16P08779 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT16P08779 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
KRT16P08779 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.29■■□□□ 1.8
KRT16P08779 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
KRT16P08779 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
KRT16P08779 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT16P08779 AC142086.6-201ENST00000621154 1765 ntBASIC26.27■■□□□ 1.8
KRT16P08779 ST7-AS1-201ENST00000456775 1889 ntBASIC26.27■■□□□ 1.8
KRT16P08779 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
KRT16P08779 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
KRT16P08779 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms