Protein–RNA interactions for Protein: P08519

LPA, Apolipoprotein(a), humanhuman

Predictions only

Length 4,548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPAP08519 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPAP08519 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LPAP08519 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.44■□□□□ 0.06
LPAP08519 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LPAP08519 DENR-202ENST00000455982 1052 ntTSL 5 BASIC15.41■□□□□ 0.06
LPAP08519 MIR639-201ENST00000384974 98 ntBASIC15.4■□□□□ 0.06
LPAP08519 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 BOD1-206ENST00000480951 814 ntTSL 2 BASIC15.4■□□□□ 0.06
LPAP08519 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC15.4■□□□□ 0.06
LPAP08519 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LPAP08519 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC15.4■□□□□ 0.06
LPAP08519 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC15.39■□□□□ 0.05
LPAP08519 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC15.39■□□□□ 0.05
LPAP08519 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC15.38■□□□□ 0.05
LPAP08519 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LPAP08519 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC15.37■□□□□ 0.05
LPAP08519 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LPAP08519 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
LPAP08519 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LPAP08519 AC021231.2-201ENST00000594613 730 ntBASIC15.36■□□□□ 0.05
LPAP08519 MACF1-219ENST00000484793 834 ntTSL 2 BASIC15.35■□□□□ 0.05
LPAP08519 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LPAP08519 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC15.35■□□□□ 0.05
LPAP08519 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC15.34■□□□□ 0.05
LPAP08519 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC15.34■□□□□ 0.05
LPAP08519 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC15.33■□□□□ 0.04
LPAP08519 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC15.33■□□□□ 0.04
LPAP08519 MIR3648-2-201ENST00000581792 180 ntBASIC15.33■□□□□ 0.04
LPAP08519 MIR3648-1-201ENST00000615959 180 ntBASIC15.33■□□□□ 0.04
LPAP08519 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 CR559946.2-201ENST00000623684 991 ntBASIC15.32■□□□□ 0.04
LPAP08519 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LPAP08519 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC15.32■□□□□ 0.04
LPAP08519 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LPAP08519 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LPAP08519 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPAP08519 AC016575.1-201ENST00000607026 382 ntBASIC15.3■□□□□ 0.04
LPAP08519 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LPAP08519 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LPAP08519 RNF166-209ENST00000567844 633 ntTSL 5 BASIC15.29■□□□□ 0.04
LPAP08519 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LPAP08519 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LPAP08519 CALM3-209ENST00000597743 577 ntTSL 4 BASIC15.26■□□□□ 0.03
LPAP08519 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC15.25■□□□□ 0.03
LPAP08519 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.25■□□□□ 0.03
LPAP08519 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.25■□□□□ 0.03
LPAP08519 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.25■□□□□ 0.03
LPAP08519 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LPAP08519 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LPAP08519 DUX4L29-201ENST00000425409 679 ntBASIC15.24■□□□□ 0.03
LPAP08519 GDI1-215ENST00000630693 786 ntTSL 4 BASIC15.24■□□□□ 0.03
LPAP08519 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPAP08519 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LPAP08519 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LPAP08519 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LPAP08519 ABHD17AP3-201ENST00000503096 1137 ntBASIC15.22■□□□□ 0.03
LPAP08519 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPAP08519 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LPAP08519 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LPAP08519 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.21■□□□□ 0.03
LPAP08519 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LPAP08519 WASH5P-204ENST00000632292 975 ntBASIC15.2■□□□□ 0.02
LPAP08519 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC15.2■□□□□ 0.02
LPAP08519 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC15.19■□□□□ 0.02
LPAP08519 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPAP08519 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LPAP08519 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LPAP08519 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LPAP08519 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPAP08519 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LPAP08519 MIR6090-201ENST00000622481 60 ntBASIC15.18■□□□□ 0.02
LPAP08519 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LPAP08519 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC15.17■□□□□ 0.02
LPAP08519 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPAP08519 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LPAP08519 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LPAP08519 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.16■□□□□ 0.02
LPAP08519 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC15.15■□□□□ 0.02
LPAP08519 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LPAP08519 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC15.15■□□□□ 0.02
LPAP08519 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LPAP08519 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
LPAP08519 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LPAP08519 RPS2-209ENST00000529806 993 ntTSL 3 BASIC15.14■□□□□ 0.01
LPAP08519 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LPAP08519 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LPAP08519 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms