Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRBV12-3P01733 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TRBV12-3P01733 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV12-3P01733 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TRBV12-3P01733 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV12-3P01733 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.01■□□□□ 0.95
TRBV12-3P01733 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV12-3P01733 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV12-3P01733 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV12-3P01733 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV12-3P01733 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV12-3P01733 CAHM-201ENST00000604200 896 ntBASIC20.97■□□□□ 0.95
TRBV12-3P01733 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV12-3P01733 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV12-3P01733 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV12-3P01733 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TRBV12-3P01733 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBV12-3P01733 WASH5P-204ENST00000632292 975 ntBASIC20.96■□□□□ 0.95
TRBV12-3P01733 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
TRBV12-3P01733 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV12-3P01733 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TRBV12-3P01733 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC20.94■□□□□ 0.94
TRBV12-3P01733 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV12-3P01733 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV12-3P01733 AL391121.1-201ENST00000607967 1349 ntBASIC20.93■□□□□ 0.94
TRBV12-3P01733 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV12-3P01733 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV12-3P01733 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV12-3P01733 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TRBV12-3P01733 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV12-3P01733 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV12-3P01733 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
TRBV12-3P01733 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV12-3P01733 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV12-3P01733 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.88■□□□□ 0.93
TRBV12-3P01733 SUZ12P1-203ENST00000578195 985 ntBASIC20.88■□□□□ 0.93
TRBV12-3P01733 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRBV12-3P01733 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRBV12-3P01733 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRBV12-3P01733 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV12-3P01733 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.86■□□□□ 0.93
TRBV12-3P01733 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV12-3P01733 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRBV12-3P01733 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV12-3P01733 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRBV12-3P01733 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.85■□□□□ 0.93
TRBV12-3P01733 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.84■□□□□ 0.93
TRBV12-3P01733 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV12-3P01733 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRBV12-3P01733 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRBV12-3P01733 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV12-3P01733 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV12-3P01733 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRBV12-3P01733 AL161658.1-201ENST00000623641 1967 ntBASIC20.8■□□□□ 0.92
TRBV12-3P01733 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRBV12-3P01733 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRBV12-3P01733 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.78■□□□□ 0.92
TRBV12-3P01733 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRBV12-3P01733 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV12-3P01733 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.77■□□□□ 0.92
TRBV12-3P01733 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRBV12-3P01733 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRBV12-3P01733 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV12-3P01733 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRBV12-3P01733 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.76■□□□□ 0.91
TRBV12-3P01733 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
TRBV12-3P01733 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.75■□□□□ 0.91
TRBV12-3P01733 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.75■□□□□ 0.91
TRBV12-3P01733 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV12-3P01733 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRBV12-3P01733 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TRBV12-3P01733 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.75■□□□□ 0.91
TRBV12-3P01733 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
TRBV12-3P01733 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV12-3P01733 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRBV12-3P01733 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRBV12-3P01733 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.73■□□□□ 0.91
TRBV12-3P01733 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV12-3P01733 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRBV12-3P01733 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRBV12-3P01733 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV12-3P01733 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.7■□□□□ 0.9
TRBV12-3P01733 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.7■□□□□ 0.9
TRBV12-3P01733 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV12-3P01733 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRBV12-3P01733 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV12-3P01733 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.69■□□□□ 0.9
TRBV12-3P01733 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV12-3P01733 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBV12-3P01733 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV12-3P01733 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBV12-3P01733 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV12-3P01733 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV12-3P01733 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBV12-3P01733 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBV12-3P01733 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV12-3P01733 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV12-3P01733 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
TRBV12-3P01733 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV12-3P01733 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms