Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
SNRNP200O75643 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SNRNP200O75643 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
SNRNP200O75643 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP200O75643 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SNRNP200O75643 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SNRNP200O75643 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SNRNP200O75643 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.15■■□□□ 1.78
SNRNP200O75643 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP200O75643 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP200O75643 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
SNRNP200O75643 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SNRNP200O75643 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNRNP200O75643 WASH5P-204ENST00000632292 975 ntBASIC26.13■■□□□ 1.77
SNRNP200O75643 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP200O75643 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
SNRNP200O75643 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNRNP200O75643 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.12■■□□□ 1.77
SNRNP200O75643 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP200O75643 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNRNP200O75643 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRNP200O75643 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNRNP200O75643 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SNRNP200O75643 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.08■■□□□ 1.77
SNRNP200O75643 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
SNRNP200O75643 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP200O75643 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP200O75643 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNRNP200O75643 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.05■■□□□ 1.76
SNRNP200O75643 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.05■■□□□ 1.76
SNRNP200O75643 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SNRNP200O75643 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNRNP200O75643 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SNRNP200O75643 AL162393.1-201ENST00000437852 946 ntBASIC26.01■■□□□ 1.75
SNRNP200O75643 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNRNP200O75643 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26■■□□□ 1.75
SNRNP200O75643 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26■■□□□ 1.75
SNRNP200O75643 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SNRNP200O75643 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SNRNP200O75643 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP200O75643 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP200O75643 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
SNRNP200O75643 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SNRNP200O75643 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SNRNP200O75643 RPS2P35-201ENST00000443417 897 ntBASIC25.95■■□□□ 1.74
SNRNP200O75643 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SNRNP200O75643 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP200O75643 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP200O75643 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SNRNP200O75643 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.91■■□□□ 1.74
SNRNP200O75643 DUX4L28-201ENST00000623687 678 ntBASIC25.91■■□□□ 1.74
SNRNP200O75643 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SNRNP200O75643 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.9■■□□□ 1.74
SNRNP200O75643 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SNRNP200O75643 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SNRNP200O75643 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.89■■□□□ 1.74
SNRNP200O75643 AC005559.1-201ENST00000589661 871 ntBASIC25.89■■□□□ 1.74
SNRNP200O75643 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNRNP200O75643 MIR762-201ENST00000390236 83 ntBASIC25.88■■□□□ 1.73
SNRNP200O75643 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.88■■□□□ 1.73
SNRNP200O75643 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SNRNP200O75643 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.88■■□□□ 1.73
SNRNP200O75643 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.87■■□□□ 1.73
SNRNP200O75643 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SNRNP200O75643 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.86■■□□□ 1.73
SNRNP200O75643 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP200O75643 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP200O75643 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SNRNP200O75643 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SNRNP200O75643 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
SNRNP200O75643 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
SNRNP200O75643 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.83■■□□□ 1.73
SNRNP200O75643 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC25.83■■□□□ 1.73
SNRNP200O75643 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SNRNP200O75643 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRNP200O75643 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
SNRNP200O75643 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SNRNP200O75643 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.81■■□□□ 1.72
SNRNP200O75643 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.81■■□□□ 1.72
SNRNP200O75643 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.81■■□□□ 1.72
SNRNP200O75643 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SNRNP200O75643 AL161658.1-201ENST00000623641 1967 ntBASIC25.8■■□□□ 1.72
SNRNP200O75643 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SNRNP200O75643 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SNRNP200O75643 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.79■■□□□ 1.72
SNRNP200O75643 MIR3665-201ENST00000578708 105 ntBASIC25.79■■□□□ 1.72
SNRNP200O75643 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SNRNP200O75643 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.78■■□□□ 1.72
SNRNP200O75643 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.77■■□□□ 1.72
SNRNP200O75643 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SNRNP200O75643 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.76■■□□□ 1.71
SNRNP200O75643 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms