Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 pRNA.5-201ENST00000612139 90 ntBASIC19.13■□□□□ 0.65
RTTNQ86VV8 pRNA.11-201ENST00000618423 90 ntBASIC19.13■□□□□ 0.65
RTTNQ86VV8 pRNA.13-201ENST00000619112 90 ntBASIC19.13■□□□□ 0.65
RTTNQ86VV8 AL355001.2-201ENST00000620617 1191 ntBASIC19.13■□□□□ 0.65
RTTNQ86VV8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTTNQ86VV8 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.13■□□□□ 0.65
RTTNQ86VV8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTTNQ86VV8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTTNQ86VV8 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTTNQ86VV8 AL117328.2-201ENST00000624617 1940 ntBASIC19.12■□□□□ 0.65
RTTNQ86VV8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTTNQ86VV8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTTNQ86VV8 LINC00565-201ENST00000562710 2331 ntBASIC19.12■□□□□ 0.65
RTTNQ86VV8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTTNQ86VV8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.12■□□□□ 0.65
RTTNQ86VV8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTTNQ86VV8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RTTNQ86VV8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RTTNQ86VV8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.1■□□□□ 0.65
RTTNQ86VV8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 AC080038.3-201ENST00000623346 1952 ntBASIC19.1■□□□□ 0.65
RTTNQ86VV8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RTTNQ86VV8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.1■□□□□ 0.65
RTTNQ86VV8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.1■□□□□ 0.65
RTTNQ86VV8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RTTNQ86VV8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 AC139530.1-201ENST00000575312 1977 ntBASIC19.1■□□□□ 0.65
RTTNQ86VV8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.1■□□□□ 0.65
RTTNQ86VV8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RTTNQ86VV8 MIR939-201ENST00000401314 82 ntBASIC19.09■□□□□ 0.65
RTTNQ86VV8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.09■□□□□ 0.65
RTTNQ86VV8 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RTTNQ86VV8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTTNQ86VV8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTTNQ86VV8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTTNQ86VV8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RTTNQ86VV8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RTTNQ86VV8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTTNQ86VV8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTTNQ86VV8 AC009086.3-201ENST00000623486 1008 ntBASIC19.08■□□□□ 0.65
RTTNQ86VV8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RTTNQ86VV8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RTTNQ86VV8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTTNQ86VV8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
RTTNQ86VV8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTTNQ86VV8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RTTNQ86VV8 MIR4767-201ENST00000582827 78 ntBASIC19.08■□□□□ 0.64
RTTNQ86VV8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RTTNQ86VV8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTTNQ86VV8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTTNQ86VV8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.07■□□□□ 0.64
RTTNQ86VV8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.07■□□□□ 0.64
RTTNQ86VV8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.07■□□□□ 0.64
RTTNQ86VV8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RTTNQ86VV8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTTNQ86VV8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RTTNQ86VV8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms