RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 NISCHQ9Y2I1 1504 aa51.29■■■■■ 5.8
PIKFYVE-203ENST00000392202 CCDC180Q9P1Z9 1646 aa45.06■■■■■ 4.8
PIKFYVE-203ENST00000392202 ZCCHC6Q5VYS8 1495 aaKnown RBP43.02■■■■■ 4.48
PIKFYVE-203ENST00000392202 ABCC9O60706 1549 aa42.89■■■■■ 4.46
PIKFYVE-203ENST00000392202 DCAF1Q9Y4B6 1507 aa42.51■■■■■ 4.4
PIKFYVE-203ENST00000392202 DCAF8L2P0C7V8 631 aa42.22■■■■■ 4.35
PIKFYVE-203ENST00000392202 MYO15BQ96JP2 1530 aa42.19■■■■■ 4.34
PIKFYVE-203ENST00000392202 NACADO15069 1562 aa42.01■■■■■ 4.32
PIKFYVE-203ENST00000392202 RB1CC1Q8TDY2 1594 aa41.74■■■■■ 4.27
PIKFYVE-203ENST00000392202 SHROOM4Q9ULL8 1493 aa41.3■■■■■ 4.2
PIKFYVE-203ENST00000392202 SCRIBQ14160 1630 aa41.22■■■■■ 4.19
PIKFYVE-203ENST00000392202 UNC13AQ9UPW8 1703 aa40.92■■■■■ 4.14
PIKFYVE-203ENST00000392202 BICRAQ9NZM4 1560 aa40.49■■■■■ 4.07
PIKFYVE-203ENST00000392202 PABPN1Q86U42 306 aaKnown RBP eCLIP40.28■■■■■ 4.04
PIKFYVE-203ENST00000392202 CECR2Q9BXF3 1484 aa39.81■■■■□ 3.96
PIKFYVE-203ENST00000392202 BAZ1AQ9NRL2 1556 aaPredicted RBP39.66■■■■□ 3.94
PIKFYVE-203ENST00000392202 MROH2BQ7Z745 1585 aa39.57■■■■□ 3.92
PIKFYVE-203ENST00000392202 RSF1Q96T23 1441 aaPredicted RBP39.56■■■■□ 3.92
PIKFYVE-203ENST00000392202 SMARCA4P51532 1647 aa39.55■■■■□ 3.92
PIKFYVE-203ENST00000392202 SUPT5HO00267 1087 aaKnown RBP39.48■■■■□ 3.91
PIKFYVE-203ENST00000392202 EIF4G1Q04637 1599 aaKnown RBP39.28■■■■□ 3.88
PIKFYVE-203ENST00000392202 WIZO95785 1651 aa39.24■■■■□ 3.87
PIKFYVE-203ENST00000392202 PEG3Q9GZU2 1588 aa39.14■■■■□ 3.86
PIKFYVE-203ENST00000392202 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
PIKFYVE-203ENST00000392202 ATAD2BQ9ULI0 1458 aa38.97■■■■□ 3.83
PIKFYVE-203ENST00000392202 TOP2AP11388 1531 aaKnown RBP38.88■■■■□ 3.81
PIKFYVE-203ENST00000392202 CC2D2AQ9P2K1 1620 aa38.81■■■■□ 3.8
PIKFYVE-203ENST00000392202 NCAPD3P42695 1498 aa38.73■■■■□ 3.79
PIKFYVE-203ENST00000392202 BAZ1BQ9UIG0 1483 aaKnown RBP38.71■■■■□ 3.79
PIKFYVE-203ENST00000392202 HMGXB3Q12766 1538 aa38.7■■■■□ 3.79
PIKFYVE-203ENST00000392202 CCDC88BA6NC98 1476 aa38.39■■■■□ 3.74
PIKFYVE-203ENST00000392202 DNAJC5BQ9UF47 199 aa38.38■■■■□ 3.73
PIKFYVE-203ENST00000392202 CFTRP13569 1480 aa37.74■■■■□ 3.63
PIKFYVE-203ENST00000392202 CADPSQ9ULU8 1353 aa37.66■■■■□ 3.62
PIKFYVE-203ENST00000392202 PRDM2Q13029 1718 aa37.66■■■■□ 3.62
PIKFYVE-203ENST00000392202 CHIC1Q5VXU3 224 aa37.65■■■■□ 3.62
PIKFYVE-203ENST00000392202 LAMC3Q9Y6N6 1575 aa37.54■■■■□ 3.6
PIKFYVE-203ENST00000392202 NESP48681 1621 aa37.47■■■■□ 3.59
PIKFYVE-203ENST00000392202 ABCC8Q09428 1581 aa37.41■■■■□ 3.58
PIKFYVE-203ENST00000392202 FANCD2Q9BXW9 1451 aa37.25■■■■□ 3.55
PIKFYVE-203ENST00000392202 WRNQ14191 1432 aaPredicted RBP eCLIP37.25■■■■□ 3.55
PIKFYVE-203ENST00000392202 TRIM41Q8WV44 630 aa37.22■■■■□ 3.55
PIKFYVE-203ENST00000392202 PDS5BQ9NTI5 1447 aa37.19■■■■□ 3.54
PIKFYVE-203ENST00000392202 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
PIKFYVE-203ENST00000392202 BIVM-ERCC5R4GMW8 1640 aa37.09■■■■□ 3.53
PIKFYVE-203ENST00000392202 KIF21AQ7Z4S6 1674 aa37.09■■■■□ 3.53
PIKFYVE-203ENST00000392202 CEP164Q9UPV0 1460 aa37.09■■■■□ 3.53
PIKFYVE-203ENST00000392202 TOP2BQ02880 1626 aa37.08■■■■□ 3.53
PIKFYVE-203ENST00000392202 CUX1P39880 1505 aa37.05■■■■□ 3.52
PIKFYVE-203ENST00000392202 DNMBPQ6XZF7 1577 aa36.9■■■■□ 3.5
PIKFYVE-203ENST00000392202 URB2Q14146 1524 aaKnown RBP36.83■■■■□ 3.49
PIKFYVE-203ENST00000392202 TOPBP1Q92547 1522 aa36.82■■■■□ 3.49
PIKFYVE-203ENST00000392202 ERCC6Q03468 1493 aa36.81■■■■□ 3.48
PIKFYVE-203ENST00000392202 MRC2Q9UBG0 1479 aa36.76■■■■□ 3.48
PIKFYVE-203ENST00000392202 FGD5Q6ZNL6 1462 aa36.7■■■■□ 3.47
PIKFYVE-203ENST00000392202 THOC2Q8NI27 1593 aaKnown RBP36.63■■■■□ 3.45
PIKFYVE-203ENST00000392202 WDR62O43379 1518 aa36.62■■■■□ 3.45
PIKFYVE-203ENST00000392202 POLA1P09884 1462 aaPredicted RBP36.6■■■■□ 3.45
PIKFYVE-203ENST00000392202 SOGA1O94964 1423 aa36.58■■■■□ 3.45
PIKFYVE-203ENST00000392202 EEA1Q15075 1411 aa36.54■■■■□ 3.44
PIKFYVE-203ENST00000392202 RUSC2Q8N2Y8 1516 aa36.48■■■■□ 3.43
PIKFYVE-203ENST00000392202 FAM9AQ8IZU1 332 aaPredicted RBP36.44■■■■□ 3.42
PIKFYVE-203ENST00000392202 RAD54L2Q9Y4B4 1467 aa36.42■■■■□ 3.42
PIKFYVE-203ENST00000392202 WDR97A6NE52 1622 aa36.41■■■■□ 3.42
PIKFYVE-203ENST00000392202 ABCA10Q8WWZ4 1543 aa36.4■■■■□ 3.42
PIKFYVE-203ENST00000392202 KIF27Q86VH2 1401 aa36.36■■■■□ 3.41
PIKFYVE-203ENST00000392202 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
PIKFYVE-203ENST00000392202 CUX2O14529 1486 aa36.35■■■■□ 3.41
PIKFYVE-203ENST00000392202 CSRNP3Q8WYN3 585 aa36.27■■■■□ 3.4
PIKFYVE-203ENST00000392202 IFT140Q96RY7 1462 aa36.24■■■■□ 3.39
PIKFYVE-203ENST00000392202 ABCA5Q8WWZ7 1642 aa36.19■■■■□ 3.38
PIKFYVE-203ENST00000392202 KIF21BO75037 1637 aa36.12■■■■□ 3.37
PIKFYVE-203ENST00000392202 LOC105371045A0A1W2PR82 267 aa36.1■■■■□ 3.37
PIKFYVE-203ENST00000392202 TDRD9Q8NDG6 1382 aaKnown RBP36.06■■■■□ 3.36
PIKFYVE-203ENST00000392202 GAPVD1Q14C86 1478 aa36.05■■■■□ 3.36
PIKFYVE-203ENST00000392202 IGF1RP08069 1367 aa36.05■■■■□ 3.36
PIKFYVE-203ENST00000392202 PRXQ9BXM0 1461 aa36.02■■■■□ 3.36
PIKFYVE-203ENST00000392202 ERICH3Q5RHP9 1530 aa35.99■■■■□ 3.35
PIKFYVE-203ENST00000392202 ZNF608Q9ULD9 1512 aaPredicted RBP35.99■■■■□ 3.35
PIKFYVE-203ENST00000392202 GOLGA3Q08378 1498 aa35.98■■■■□ 3.35
PIKFYVE-203ENST00000392202 PBRM1Q86U86 1689 aa35.97■■■■□ 3.35
PIKFYVE-203ENST00000392202 CUL7Q14999 1698 aa35.95■■■■□ 3.34
PIKFYVE-203ENST00000392202 EIF4G3O43432 1585 aaKnown RBP35.94■■■■□ 3.34
PIKFYVE-203ENST00000392202 AQRO60306 1485 aaKnown RBP eCLIP35.93■■■■□ 3.34
PIKFYVE-203ENST00000392202 RAPGEF2Q9Y4G8 1499 aa35.89■■■■□ 3.34
PIKFYVE-203ENST00000392202 CARMIL1Q5VZK9 1371 aa35.87■■■■□ 3.33
PIKFYVE-203ENST00000392202 EHMT2Q96KQ7 1210 aa35.86■■■■□ 3.33
PIKFYVE-203ENST00000392202 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
PIKFYVE-203ENST00000392202 TNIKQ9UKE5 1360 aa35.75■■■■□ 3.31
PIKFYVE-203ENST00000392202 ADAMTS12P58397 1594 aa35.74■■■■□ 3.31
PIKFYVE-203ENST00000392202 UBTFP17480 764 aaKnown RBP35.69■■■■□ 3.3
PIKFYVE-203ENST00000392202 FHAD1B1AJZ9 1412 aa35.68■■■■□ 3.3
PIKFYVE-203ENST00000392202 SNAPC4Q5SXM2 1469 aa35.66■■■■□ 3.3
PIKFYVE-203ENST00000392202 MAGI1Q96QZ7 1491 aaPredicted RBP35.64■■■■□ 3.3
PIKFYVE-203ENST00000392202 CEP162Q5TB80 1403 aa35.51■■■■□ 3.27
PIKFYVE-203ENST00000392202 CTTNBP2Q8WZ74 1663 aa35.49■■■■□ 3.27
PIKFYVE-203ENST00000392202 SYNJ2O15056 1496 aa35.48■■■■□ 3.27
PIKFYVE-203ENST00000392202 GRIN2AQ12879 1464 aa35.43■■■■□ 3.26
PIKFYVE-203ENST00000392202 CLIP1P30622 1438 aa35.34■■■■□ 3.25
PIKFYVE-203ENST00000392202 CHMP7Q8WUX9 453 aaPredicted RBP35.3■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms