Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NIPAL1Q6NVV3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NIPAL1Q6NVV3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.88■□□□□ 0.93
NIPAL1Q6NVV3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 RASA4CP-201ENST00000424092 1398 ntBASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 AP005435.1-201ENST00000529293 1178 ntBASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 AC142381.2-201ENST00000566120 298 ntBASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NIPAL1Q6NVV3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 MIR939-201ENST00000401314 82 ntBASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 SUDS3P1-201ENST00000505831 966 ntBASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 AP001330.3-201ENST00000520123 633 ntBASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 AC087239.1-201ENST00000622671 572 ntBASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NIPAL1Q6NVV3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 AL031432.3-201ENST00000607698 485 ntBASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
NIPAL1Q6NVV3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 AF213884.3-201ENST00000563833 479 ntBASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.84■□□□□ 0.93
NIPAL1Q6NVV3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 AC127496.7-201ENST00000625110 1798 ntBASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 AL136967.2-201ENST00000623968 743 ntBASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NIPAL1Q6NVV3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms