Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A20Q9NP91 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC6A20Q9NP91 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A20Q9NP91 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC6A20Q9NP91 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A20Q9NP91 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC6A20Q9NP91 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 AC010141.3-201ENST00000456659 717 ntBASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC6A20Q9NP91 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 AC026271.2-201ENST00000428091 497 ntBASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 AC087239.1-201ENST00000622671 572 ntBASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC6A20Q9NP91 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC6A20Q9NP91 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC6A20Q9NP91 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.95■□□□□ 0.94
SLC6A20Q9NP91 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 ESRRAP2-201ENST00000418437 1549 ntBASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 OXCT2P1-201ENST00000447263 1535 ntBASIC20.94■□□□□ 0.94
SLC6A20Q9NP91 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 AC133561.1-201ENST00000568600 2415 ntBASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC6A20Q9NP91 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms