RNA–Protein interactions for RNA: ENST00000586572.1

AC006538.2-201, humanhuman

APPRIS P1 TSL 4 BASIC

Gene AC006538.2, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006538.2-201ENST00000586572 NISCHQ9Y2I1 1504 aa53.33■■■■■ 6.13
AC006538.2-201ENST00000586572 CCDC180Q9P1Z9 1646 aa47.33■■■■■ 5.17
AC006538.2-201ENST00000586572 ABCC9O60706 1549 aa46.87■■■■■ 5.09
AC006538.2-201ENST00000586572 DCAF8L2P0C7V8 631 aa44.95■■■■■ 4.79
AC006538.2-201ENST00000586572 RB1CC1Q8TDY2 1594 aa44.76■■■■■ 4.76
AC006538.2-201ENST00000586572 NACADO15069 1562 aa44.63■■■■■ 4.73
AC006538.2-201ENST00000586572 ZCCHC6Q5VYS8 1495 aaKnown RBP44.37■■■■■ 4.69
AC006538.2-201ENST00000586572 MYO15BQ96JP2 1530 aa44.19■■■■■ 4.67
AC006538.2-201ENST00000586572 DCAF1Q9Y4B6 1507 aa43.97■■■■■ 4.63
AC006538.2-201ENST00000586572 PABPN1Q86U42 306 aaKnown RBP eCLIP43.87■■■■■ 4.61
AC006538.2-201ENST00000586572 UNC13AQ9UPW8 1703 aa43.7■■■■■ 4.59
AC006538.2-201ENST00000586572 BICRAQ9NZM4 1560 aa43.49■■■■■ 4.55
AC006538.2-201ENST00000586572 SCRIBQ14160 1630 aa43.43■■■■■ 4.54
AC006538.2-201ENST00000586572 DNAJC5BQ9UF47 199 aa43.31■■■■■ 4.52
AC006538.2-201ENST00000586572 SHROOM4Q9ULL8 1493 aa42.8■■■■■ 4.44
AC006538.2-201ENST00000586572 EIF4G1Q04637 1599 aaKnown RBP42.35■■■■■ 4.37
AC006538.2-201ENST00000586572 CC2D2AQ9P2K1 1620 aa42.25■■■■■ 4.35
AC006538.2-201ENST00000586572 CECR2Q9BXF3 1484 aa42.06■■■■■ 4.32
AC006538.2-201ENST00000586572 SMARCA4P51532 1647 aa41.4■■■■■ 4.22
AC006538.2-201ENST00000586572 BAZ1AQ9NRL2 1556 aaPredicted RBP41.3■■■■■ 4.2
AC006538.2-201ENST00000586572 ATAD2BQ9ULI0 1458 aa41.3■■■■■ 4.2
AC006538.2-201ENST00000586572 NCAPD3P42695 1498 aa41.24■■■■■ 4.19
AC006538.2-201ENST00000586572 MROH2BQ7Z745 1585 aa41.18■■■■■ 4.18
AC006538.2-201ENST00000586572 SMARCA2P51531 1590 aa41.13■■■■■ 4.18
AC006538.2-201ENST00000586572 HMGXB3Q12766 1538 aa40.96■■■■■ 4.15
AC006538.2-201ENST00000586572 BAZ1BQ9UIG0 1483 aaKnown RBP40.94■■■■■ 4.14
AC006538.2-201ENST00000586572 PEG3Q9GZU2 1588 aa40.91■■■■■ 4.14
AC006538.2-201ENST00000586572 WIZO95785 1651 aa40.69■■■■■ 4.1
AC006538.2-201ENST00000586572 RSF1Q96T23 1441 aaPredicted RBP40.62■■■■■ 4.09
AC006538.2-201ENST00000586572 NESP48681 1621 aa40.49■■■■■ 4.07
AC006538.2-201ENST00000586572 ERCC6Q03468 1493 aa40.36■■■■■ 4.05
AC006538.2-201ENST00000586572 TOP2AP11388 1531 aaKnown RBP40.19■■■■■ 4.02
AC006538.2-201ENST00000586572 LAMC3Q9Y6N6 1575 aa40.14■■■■■ 4.02
AC006538.2-201ENST00000586572 CADPSQ9ULU8 1353 aa40.1■■■■■ 4.01
AC006538.2-201ENST00000586572 PDS5BQ9NTI5 1447 aa39.95■■■■□ 3.99
AC006538.2-201ENST00000586572 CUX2O14529 1486 aa39.88■■■■□ 3.97
AC006538.2-201ENST00000586572 KIF21AQ7Z4S6 1674 aa39.85■■■■□ 3.97
AC006538.2-201ENST00000586572 CCDC88BA6NC98 1476 aa39.81■■■■□ 3.96
AC006538.2-201ENST00000586572 CFTRP13569 1480 aa39.77■■■■□ 3.96
AC006538.2-201ENST00000586572 THOC2Q8NI27 1593 aaKnown RBP39.76■■■■□ 3.96
AC006538.2-201ENST00000586572 FANCD2Q9BXW9 1451 aa39.65■■■■□ 3.94
AC006538.2-201ENST00000586572 SUPT5HO00267 1087 aaKnown RBP39.63■■■■□ 3.93
AC006538.2-201ENST00000586572 CEP164Q9UPV0 1460 aa39.59■■■■□ 3.93
AC006538.2-201ENST00000586572 MRC2Q9UBG0 1479 aa39.58■■■■□ 3.93
AC006538.2-201ENST00000586572 WDR62O43379 1518 aa39.4■■■■□ 3.9
AC006538.2-201ENST00000586572 URB2Q14146 1524 aaKnown RBP39.3■■■■□ 3.88
AC006538.2-201ENST00000586572 PRDM2Q13029 1718 aa39.24■■■■□ 3.87
AC006538.2-201ENST00000586572 DNAJC5Q9H3Z4 198 aa39.05■■■■□ 3.84
AC006538.2-201ENST00000586572 TOPBP1Q92547 1522 aa38.98■■■■□ 3.83
AC006538.2-201ENST00000586572 DNMBPQ6XZF7 1577 aa38.85■■■■□ 3.81
AC006538.2-201ENST00000586572 ABCC8Q09428 1581 aa38.82■■■■□ 3.81
AC006538.2-201ENST00000586572 IFT140Q96RY7 1462 aa38.75■■■■□ 3.79
AC006538.2-201ENST00000586572 ZNF608Q9ULD9 1512 aaPredicted RBP38.72■■■■□ 3.79
AC006538.2-201ENST00000586572 POLA1P09884 1462 aaPredicted RBP38.65■■■■□ 3.78
AC006538.2-201ENST00000586572 CUX1P39880 1505 aa38.63■■■■□ 3.77
AC006538.2-201ENST00000586572 RAD54L2Q9Y4B4 1467 aa38.58■■■■□ 3.77
AC006538.2-201ENST00000586572 FGD5Q6ZNL6 1462 aa38.54■■■■□ 3.76
AC006538.2-201ENST00000586572 SOGA1O94964 1423 aa38.51■■■■□ 3.76
AC006538.2-201ENST00000586572 TARBP1Q13395 1621 aaKnown RBP38.51■■■■□ 3.76
AC006538.2-201ENST00000586572 AQRO60306 1485 aaKnown RBP eCLIP38.48■■■■□ 3.755e-8■■□□□ 11.9
AC006538.2-201ENST00000586572 EIF4G3O43432 1585 aaKnown RBP38.44■■■■□ 3.74
AC006538.2-201ENST00000586572 TDRD9Q8NDG6 1382 aaKnown RBP38.41■■■■□ 3.74
AC006538.2-201ENST00000586572 OSCARQ8IYS5 282 aa38.31■■■■□ 3.72
AC006538.2-201ENST00000586572 WRNQ14191 1432 aaPredicted RBP eCLIP38.29■■■■□ 3.72
AC006538.2-201ENST00000586572 SYNJ1O43426 1573 aa38.21■■■■□ 3.71
AC006538.2-201ENST00000586572 FBLN2P98095 1184 aa38.16■■■■□ 3.7
AC006538.2-201ENST00000586572 TOP2BQ02880 1626 aa38.13■■■■□ 3.69
AC006538.2-201ENST00000586572 BIVM-ERCC5R4GMW8 1640 aa38.1■■■■□ 3.69
AC006538.2-201ENST00000586572 WDR97A6NE52 1622 aa38.08■■■■□ 3.69
AC006538.2-201ENST00000586572 SNAPC4Q5SXM2 1469 aa38.08■■■■□ 3.69
AC006538.2-201ENST00000586572 ABCA10Q8WWZ4 1543 aa38.07■■■■□ 3.69
AC006538.2-201ENST00000586572 GRIN2BQ13224 1484 aa38.03■■■■□ 3.68
AC006538.2-201ENST00000586572 GAPVD1Q14C86 1478 aa38.03■■■■□ 3.68
AC006538.2-201ENST00000586572 CHD1O14646 1710 aa37.96■■■■□ 3.67
AC006538.2-201ENST00000586572 ABCA5Q8WWZ7 1642 aa37.92■■■■□ 3.66
AC006538.2-201ENST00000586572 CHMP7Q8WUX9 453 aaPredicted RBP37.92■■■■□ 3.66
AC006538.2-201ENST00000586572 MAGI1Q96QZ7 1491 aaPredicted RBP37.9■■■■□ 3.66
AC006538.2-201ENST00000586572 TRIM41Q8WV44 630 aa37.86■■■■□ 3.65
AC006538.2-201ENST00000586572 PBRM1Q86U86 1689 aa37.85■■■■□ 3.65
AC006538.2-201ENST00000586572 SYNJ2O15056 1496 aa37.79■■■■□ 3.64
AC006538.2-201ENST00000586572 RIMBP3CA6NJZ7 1639 aa37.67■■■■□ 3.62
AC006538.2-201ENST00000586572 RIMBP3BA6NNM3 1639 aa37.67■■■■□ 3.62
AC006538.2-201ENST00000586572 RIMBP3Q9UFD9 1639 aa37.67■■■■□ 3.62
AC006538.2-201ENST00000586572 ARHGEF11O15085 1522 aa37.66■■■■□ 3.62
AC006538.2-201ENST00000586572 ADAMTS12P58397 1594 aa37.6■■■■□ 3.61
AC006538.2-201ENST00000586572 ERICH3Q5RHP9 1530 aa37.57■■■■□ 3.61
AC006538.2-201ENST00000586572 CLASP1Q7Z460 1538 aa37.56■■■■□ 3.6
AC006538.2-201ENST00000586572 FHAD1B1AJZ9 1412 aa37.56■■■■□ 3.6
AC006538.2-201ENST00000586572 GRIN2AQ12879 1464 aa37.55■■■■□ 3.6
AC006538.2-201ENST00000586572 KIF27Q86VH2 1401 aa37.48■■■■□ 3.59
AC006538.2-201ENST00000586572 CYB5RLQ6IPT4 315 aa37.46■■■■□ 3.59
AC006538.2-201ENST00000586572 IGF1RP08069 1367 aa37.42■■■■□ 3.58
AC006538.2-201ENST00000586572 ARAP1Q96P48 1450 aa37.39■■■■□ 3.58
AC006538.2-201ENST00000586572 CEP170Q5SW79 1584 aa37.38■■■■□ 3.58
AC006538.2-201ENST00000586572 NUP160Q12769 1436 aa37.37■■■■□ 3.57
AC006538.2-201ENST00000586572 RUSC2Q8N2Y8 1516 aa37.23■■■■□ 3.55
AC006538.2-201ENST00000586572 CARMIL1Q5VZK9 1371 aa37.19■■■■□ 3.54
AC006538.2-201ENST00000586572 ERCC6L2Q5T890 1561 aa37.17■■■■□ 3.54
AC006538.2-201ENST00000586572 CUL7Q14999 1698 aa37.15■■■■□ 3.54
AC006538.2-201ENST00000586572 JPH4Q96JJ6 628 aa37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms