Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TTC9CQ8N5M4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 AC242852.2-201ENST00000615738 1807 ntBASIC17.28■□□□□ 0.36
TTC9CQ8N5M4 ECEL1P1-201ENST00000373592 1742 ntBASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 PKD1P6-201ENST00000343738 4769 ntBASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 AL138724.1-201ENST00000606771 1088 ntBASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TTC9CQ8N5M4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.27■□□□□ 0.35
TTC9CQ8N5M4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC9CQ8N5M4 AC079834.2-201ENST00000609776 1949 ntBASIC17.27■□□□□ 0.35
TTC9CQ8N5M4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC9CQ8N5M4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TTC9CQ8N5M4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 SYT6-210ENST00000641643 1587 ntBASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TTC9CQ8N5M4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 AC131212.1-201ENST00000613771 668 ntBASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TTC9CQ8N5M4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 PTCHD3P2-201ENST00000424937 1205 ntBASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TTC9CQ8N5M4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 SERBP1P1-201ENST00000396021 1160 ntBASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 AL136116.3-201ENST00000402907 1138 ntBASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 CA15P2-201ENST00000611168 834 ntBASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TTC9CQ8N5M4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms