RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 NISCHQ9Y2I1 1504 aa45.18■■■■■ 4.82
HTATSF1-201ENST00000218364 SHROOM4Q9ULL8 1493 aa38.49■■■■□ 3.75
HTATSF1-201ENST00000218364 CCDC180Q9P1Z9 1646 aa38.36■■■■□ 3.73
HTATSF1-201ENST00000218364 ZCCHC6Q5VYS8 1495 aaKnown RBP38.32■■■■□ 3.72
HTATSF1-201ENST00000218364 SUPT5HO00267 1087 aaKnown RBP37.93■■■■□ 3.66
HTATSF1-201ENST00000218364 CHIC1Q5VXU3 224 aa37.22■■■■□ 3.55
HTATSF1-201ENST00000218364 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
HTATSF1-201ENST00000218364 MYO15BQ96JP2 1530 aa37.15■■■■□ 3.54
HTATSF1-201ENST00000218364 DCAF8L2P0C7V8 631 aa37.01■■■■□ 3.52
HTATSF1-201ENST00000218364 ABCC9O60706 1549 aa36.77■■■■□ 3.48
HTATSF1-201ENST00000218364 HRCP23327 699 aa36.7■■■■□ 3.47
HTATSF1-201ENST00000218364 PCGF6Q9BYE7 350 aa36.3■■■■□ 3.4
HTATSF1-201ENST00000218364 LOC105371045A0A1W2PR82 267 aa36.01■■■■□ 3.35
HTATSF1-201ENST00000218364 NACADO15069 1562 aa35.87■■■■□ 3.33
HTATSF1-201ENST00000218364 RSF1Q96T23 1441 aaPredicted RBP35.86■■■■□ 3.33
HTATSF1-201ENST00000218364 SCRIBQ14160 1630 aa35.79■■■■□ 3.32
HTATSF1-201ENST00000218364 PPARGC1BQ86YN6 1023 aaKnown RBP35.7■■■■□ 3.31
HTATSF1-201ENST00000218364 TRIM26Q12899 539 aaPredicted RBP35.68■■■■□ 3.3
HTATSF1-201ENST00000218364 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
HTATSF1-201ENST00000218364 TRIM41Q8WV44 630 aa35.4■■■■□ 3.26
HTATSF1-201ENST00000218364 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
HTATSF1-201ENST00000218364 ZEB1P37275 1124 aaPredicted RBP35.13■■■■□ 3.21
HTATSF1-201ENST00000218364 MROH2BQ7Z745 1585 aa35.09■■■■□ 3.21
HTATSF1-201ENST00000218364 FAM9AQ8IZU1 332 aaPredicted RBP34.99■■■■□ 3.19
HTATSF1-201ENST00000218364 WIZO95785 1651 aa34.89■■■■□ 3.18
HTATSF1-201ENST00000218364 UNC13AQ9UPW8 1703 aa34.88■■■■□ 3.17
HTATSF1-201ENST00000218364 BAZ1AQ9NRL2 1556 aaPredicted RBP34.81■■■■□ 3.16
HTATSF1-201ENST00000218364 EIF4G1Q04637 1599 aaKnown RBP34.72■■■■□ 3.15
HTATSF1-201ENST00000218364 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
HTATSF1-201ENST00000218364 BICRAQ9NZM4 1560 aa34.59■■■■□ 3.13
HTATSF1-201ENST00000218364 EHMT2Q96KQ7 1210 aa34.55■■■■□ 3.12
HTATSF1-201ENST00000218364 TOP2AP11388 1531 aaKnown RBP34.44■■■■□ 3.1
HTATSF1-201ENST00000218364 SMARCA4P51532 1647 aa34.32■■■■□ 3.09
HTATSF1-201ENST00000218364 CCDC88BA6NC98 1476 aa34.26■■■■□ 3.07
HTATSF1-201ENST00000218364 SMARCA2P51531 1590 aa34.24■■■■□ 3.07
HTATSF1-201ENST00000218364 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
HTATSF1-201ENST00000218364 ABCC8Q09428 1581 aa34.2■■■■□ 3.07
HTATSF1-201ENST00000218364 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.04■■■■□ 3.04
HTATSF1-201ENST00000218364 EEA1Q15075 1411 aa34.02■■■■□ 3.04
HTATSF1-201ENST00000218364 CEP162Q5TB80 1403 aa34.02■■■■□ 3.04
HTATSF1-201ENST00000218364 TNIKQ9UKE5 1360 aa34.02■■■■□ 3.04
HTATSF1-201ENST00000218364 CCER1Q8TC90 406 aaPredicted RBP34.01■■■■□ 3.03
HTATSF1-201ENST00000218364 SOGA1O94964 1423 aa33.97■■■■□ 3.03
HTATSF1-201ENST00000218364 SCAF1Q9H7N4 1312 aaKnown RBP33.96■■■■□ 3.03
HTATSF1-201ENST00000218364 CSRNP3Q8WYN3 585 aa33.84■■■■□ 3.01
HTATSF1-201ENST00000218364 PELP1Q8IZL8 1130 aaKnown RBP33.83■■■■□ 3.01
HTATSF1-201ENST00000218364 RUSC2Q8N2Y8 1516 aa33.78■■■■□ 3
HTATSF1-201ENST00000218364 PEG3Q9GZU2 1588 aa33.75■■■□□ 2.99
HTATSF1-201ENST00000218364 GOLGA3Q08378 1498 aa33.73■■■□□ 2.99
HTATSF1-201ENST00000218364 UBTFP17480 764 aaKnown RBP33.63■■■□□ 2.97
HTATSF1-201ENST00000218364 ACIN1Q9UKV3 1341 aaKnown RBP33.59■■■□□ 2.97
HTATSF1-201ENST00000218364 DIEXFQ68CQ4 756 aaKnown RBP33.58■■■□□ 2.97
HTATSF1-201ENST00000218364 TTBK1Q5TCY1 1321 aaPredicted RBP33.57■■■□□ 2.96
HTATSF1-201ENST00000218364 KIF21BO75037 1637 aa33.52■■■□□ 2.96
HTATSF1-201ENST00000218364 CEP164Q9UPV0 1460 aa33.51■■■□□ 2.96
HTATSF1-201ENST00000218364 SYNJ1O43426 1573 aa33.48■■■□□ 2.95
HTATSF1-201ENST00000218364 NEUROD1Q13562 356 aa33.45■■■□□ 2.95
HTATSF1-201ENST00000218364 ATAD2BQ9ULI0 1458 aa33.36■■■□□ 2.93
HTATSF1-201ENST00000218364 CENPBP07199 599 aaPredicted RBP33.34■■■□□ 2.93
HTATSF1-201ENST00000218364 BAZ1BQ9UIG0 1483 aaKnown RBP33.33■■■□□ 2.93
HTATSF1-201ENST00000218364 CLIP1P30622 1438 aa33.31■■■□□ 2.92
HTATSF1-201ENST00000218364 ZNF316A6NFI3 1004 aaPredicted RBP33.3■■■□□ 2.92
HTATSF1-201ENST00000218364 VPS8Q8N3P4 1428 aa33.27■■■□□ 2.92
HTATSF1-201ENST00000218364 CC2D2AQ9P2K1 1620 aa33.22■■■□□ 2.91
HTATSF1-201ENST00000218364 RAPGEF2Q9Y4G8 1499 aa33.15■■■□□ 2.9
HTATSF1-201ENST00000218364 NCAPD3P42695 1498 aa33.13■■■□□ 2.89
HTATSF1-201ENST00000218364 GTF3C3Q9Y5Q9 886 aa33.13■■■□□ 2.89
HTATSF1-201ENST00000218364 TOP2BQ02880 1626 aa33.1■■■□□ 2.89
HTATSF1-201ENST00000218364 HNRNPUL2Q1KMD3 747 aaKnown RBP33.06■■■□□ 2.88
HTATSF1-201ENST00000218364 HMGXB3Q12766 1538 aa33.02■■■□□ 2.88
HTATSF1-201ENST00000218364 APLP2Q06481 763 aa32.99■■■□□ 2.87
HTATSF1-201ENST00000218364 BIVM-ERCC5R4GMW8 1640 aa32.99■■■□□ 2.87
HTATSF1-201ENST00000218364 ERICH3Q5RHP9 1530 aa32.94■■■□□ 2.86
HTATSF1-201ENST00000218364 PRXQ9BXM0 1461 aa32.88■■■□□ 2.85
HTATSF1-201ENST00000218364 DNAJC5BQ9UF47 199 aa32.83■■■□□ 2.85
HTATSF1-201ENST00000218364 MIER1Q8N108 512 aa32.8■■■□□ 2.84
HTATSF1-201ENST00000218364 CLSPNQ9HAW4 1339 aa32.78■■■□□ 2.84
HTATSF1-201ENST00000218364 ARAP1Q96P48 1450 aa32.77■■■□□ 2.84
HTATSF1-201ENST00000218364 RANGAP1P46060 587 aaPredicted RBP32.7■■■□□ 2.82
HTATSF1-201ENST00000218364 CUX1P39880 1505 aa32.65■■■□□ 2.82
HTATSF1-201ENST00000218364 YTHDC1Q96MU7 727 aaKnown RBP32.65■■■□□ 2.82
HTATSF1-201ENST00000218364 DHX57Q6P158 1386 aaKnown RBP32.65■■■□□ 2.82
HTATSF1-201ENST00000218364 KIF27Q86VH2 1401 aa32.6■■■□□ 2.81
HTATSF1-201ENST00000218364 RRBP1Q9P2E9 1410 aaKnown RBP32.59■■■□□ 2.81
HTATSF1-201ENST00000218364 KANK4Q5T7N3 995 aaPredicted RBP32.55■■■□□ 2.8
HTATSF1-201ENST00000218364 CUX2O14529 1486 aa32.51■■■□□ 2.79
HTATSF1-201ENST00000218364 CFTRP13569 1480 aa32.5■■■□□ 2.79
HTATSF1-201ENST00000218364 ARHGAP35Q9NRY4 1499 aa32.43■■■□□ 2.78
HTATSF1-201ENST00000218364 CCNB3Q8WWL7 1395 aa32.35■■■□□ 2.77
HTATSF1-201ENST00000218364 CADPSQ9ULU8 1353 aa32.29■■■□□ 2.76
HTATSF1-201ENST00000218364 PRDM2Q13029 1718 aa32.27■■■□□ 2.76
HTATSF1-201ENST00000218364 MAP3K1Q13233 1512 aa32.26■■■□□ 2.75
HTATSF1-201ENST00000218364 MYT1Q01538 1121 aa32.23■■■□□ 2.75
HTATSF1-201ENST00000218364 IGF1RP08069 1367 aa32.21■■■□□ 2.75
HTATSF1-201ENST00000218364 TIAM1Q13009 1591 aa32.17■■■□□ 2.74
HTATSF1-201ENST00000218364 NESP48681 1621 aa32.13■■■□□ 2.73
HTATSF1-201ENST00000218364 RAB3GAP2Q9H2M9 1393 aa32.08■■■□□ 2.73
HTATSF1-201ENST00000218364 MAPKBP1O60336 1514 aa32.06■■■□□ 2.72
HTATSF1-201ENST00000218364 LAMC3Q9Y6N6 1575 aa32.06■■■□□ 2.72
HTATSF1-201ENST00000218364 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms