Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
NKX6-2Q9C056 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NKX6-2Q9C056 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NKX6-2Q9C056 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 MIR3960-201ENST00000583311 91 ntBASIC17.73■□□□□ 0.43
NKX6-2Q9C056 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NKX6-2Q9C056 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 DUX4L11-201ENST00000611504 1267 ntBASIC17.72■□□□□ 0.43
NKX6-2Q9C056 DUX4L12-201ENST00000614593 1267 ntBASIC17.72■□□□□ 0.43
NKX6-2Q9C056 DUX4L14-201ENST00000621227 1267 ntBASIC17.72■□□□□ 0.43
NKX6-2Q9C056 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NKX6-2Q9C056 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 AC080038.3-201ENST00000623346 1952 ntBASIC17.71■□□□□ 0.43
NKX6-2Q9C056 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 KRT18P10-201ENST00000388836 1287 ntBASIC17.71■□□□□ 0.43
NKX6-2Q9C056 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.71■□□□□ 0.43
NKX6-2Q9C056 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.42
NKX6-2Q9C056 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.71■□□□□ 0.42
NKX6-2Q9C056 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NKX6-2Q9C056 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms