RNA–Protein interactions for RNA: ENST00000424267.6

LGI3-202, Transcript of leucine rich repeat LGI family member 3, humanhuman

TSL 1 (best) BASIC

Gene LGI3, Length 3,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3-202ENST00000424267 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
LGI3-202ENST00000424267 SHROOM4Q9ULL8 1493 aa35.41■■■■□ 3.26
LGI3-202ENST00000424267 SUPT5HO00267 1087 aaKnown RBP34.88■■■■□ 3.17
LGI3-202ENST00000424267 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.12
LGI3-202ENST00000424267 CHIC1Q5VXU3 224 aa33.31■■■□□ 2.92
LGI3-202ENST00000424267 MYO15BQ96JP2 1530 aa33.21■■■□□ 2.91
LGI3-202ENST00000424267 PCGF6Q9BYE7 350 aa33.2■■■□□ 2.91
LGI3-202ENST00000424267 ZCCHC6Q5VYS8 1495 aaKnown RBP33.1■■■□□ 2.89
LGI3-202ENST00000424267 LOC105371045A0A1W2PR82 267 aa33.03■■■□□ 2.88
LGI3-202ENST00000424267 PPARGC1BQ86YN6 1023 aaKnown RBP32.91■■■□□ 2.86
LGI3-202ENST00000424267 EHMT2Q96KQ7 1210 aa32.88■■■□□ 2.85
LGI3-202ENST00000424267 HRCP23327 699 aa32.69■■■□□ 2.82
LGI3-202ENST00000424267 FAM9AQ8IZU1 332 aaPredicted RBP32.51■■■□□ 2.8
LGI3-202ENST00000424267 CCDC180Q9P1Z9 1646 aa32.41■■■□□ 2.78
LGI3-202ENST00000424267 TRIM41Q8WV44 630 aa31.95■■■□□ 2.71
LGI3-202ENST00000424267 TRIM26Q12899 539 aaPredicted RBP31.75■■■□□ 2.67
LGI3-202ENST00000424267 TTBK1Q5TCY1 1321 aaPredicted RBP31.73■■■□□ 2.67
LGI3-202ENST00000424267 SCRIBQ14160 1630 aa31.72■■■□□ 2.67
LGI3-202ENST00000424267 RSF1Q96T23 1441 aaPredicted RBP31.53■■■□□ 2.64
LGI3-202ENST00000424267 DCAF1Q9Y4B6 1507 aa31.51■■■□□ 2.64
LGI3-202ENST00000424267 ABCC9O60706 1549 aa31.51■■■□□ 2.63
LGI3-202ENST00000424267 RB1CC1Q8TDY2 1594 aa31.28■■■□□ 2.6
LGI3-202ENST00000424267 CECR2Q9BXF3 1484 aa31.26■■■□□ 2.6
LGI3-202ENST00000424267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.18■■■□□ 2.58
LGI3-202ENST00000424267 MROH2BQ7Z745 1585 aa30.92■■■□□ 2.54
LGI3-202ENST00000424267 CCER1Q8TC90 406 aaPredicted RBP30.89■■■□□ 2.53
LGI3-202ENST00000424267 RANGAP1P46060 587 aaPredicted RBP30.83■■■□□ 2.53
LGI3-202ENST00000424267 ZEB1P37275 1124 aaPredicted RBP30.77■■■□□ 2.52
LGI3-202ENST00000424267 PABPN1Q86U42 306 aaKnown RBP eCLIP30.77■■■□□ 2.52
LGI3-202ENST00000424267 WIZO95785 1651 aa30.74■■■□□ 2.51
LGI3-202ENST00000424267 SCAF1Q9H7N4 1312 aaKnown RBP30.66■■■□□ 2.5
LGI3-202ENST00000424267 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.49
LGI3-202ENST00000424267 ABCC8Q09428 1581 aa30.5■■■□□ 2.47
LGI3-202ENST00000424267 CCDC88BA6NC98 1476 aa30.4■■■□□ 2.46
LGI3-202ENST00000424267 SOGA1O94964 1423 aa30.37■■■□□ 2.45
LGI3-202ENST00000424267 HNRNPUL2Q1KMD3 747 aaKnown RBP30.36■■■□□ 2.45
LGI3-202ENST00000424267 YTHDC1Q96MU7 727 aaKnown RBP30.31■■■□□ 2.44
LGI3-202ENST00000424267 NEUROD1Q13562 356 aa30.29■■■□□ 2.44
LGI3-202ENST00000424267 RUSC2Q8N2Y8 1516 aa30.28■■■□□ 2.44
LGI3-202ENST00000424267 NACADO15069 1562 aa30.28■■■□□ 2.44
LGI3-202ENST00000424267 PELP1Q8IZL8 1130 aaKnown RBP30.26■■■□□ 2.43
LGI3-202ENST00000424267 DIEXFQ68CQ4 756 aaKnown RBP30.25■■■□□ 2.43
LGI3-202ENST00000424267 CSRNP3Q8WYN3 585 aa30.17■■■□□ 2.42
LGI3-202ENST00000424267 CEP162Q5TB80 1403 aa30.11■■■□□ 2.41
LGI3-202ENST00000424267 GTF3C3Q9Y5Q9 886 aa30.05■■■□□ 2.4
LGI3-202ENST00000424267 ACIN1Q9UKV3 1341 aaKnown RBP30■■■□□ 2.39
LGI3-202ENST00000424267 BAZ1AQ9NRL2 1556 aaPredicted RBP30■■■□□ 2.39
LGI3-202ENST00000424267 SMARCA2P51531 1590 aa29.8■■■□□ 2.36
LGI3-202ENST00000424267 APLP2Q06481 763 aa29.78■■■□□ 2.36
LGI3-202ENST00000424267 TOP2AP11388 1531 aaKnown RBP29.77■■■□□ 2.36
LGI3-202ENST00000424267 SMARCA4P51532 1647 aa29.76■■■□□ 2.35
LGI3-202ENST00000424267 TNIKQ9UKE5 1360 aa29.74■■■□□ 2.35
LGI3-202ENST00000424267 ITGAEP38570 1179 aa29.73■■■□□ 2.35
LGI3-202ENST00000424267 EIF4G1Q04637 1599 aaKnown RBP29.72■■■□□ 2.35
LGI3-202ENST00000424267 MIER1Q8N108 512 aa29.72■■■□□ 2.35
LGI3-202ENST00000424267 ZNF316A6NFI3 1004 aaPredicted RBP29.71■■■□□ 2.35
LGI3-202ENST00000424267 CENPBP07199 599 aaPredicted RBP29.69■■■□□ 2.34
LGI3-202ENST00000424267 WRNQ14191 1432 aaPredicted RBP eCLIP29.66■■■□□ 2.34
LGI3-202ENST00000424267 CLIP1P30622 1438 aa29.51■■■□□ 2.32
LGI3-202ENST00000424267 GOLGA3Q08378 1498 aa29.51■■■□□ 2.31
LGI3-202ENST00000424267 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
LGI3-202ENST00000424267 RAPGEF2Q9Y4G8 1499 aa29.43■■■□□ 2.3
LGI3-202ENST00000424267 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
LGI3-202ENST00000424267 SYNJ1O43426 1573 aa29.38■■■□□ 2.29
LGI3-202ENST00000424267 ATP1B4Q9UN42 357 aaPredicted RBP29.35■■■□□ 2.29
LGI3-202ENST00000424267 EEA1Q15075 1411 aa29.26■■■□□ 2.27
LGI3-202ENST00000424267 BICRAQ9NZM4 1560 aa29.25■■■□□ 2.27
LGI3-202ENST00000424267 P3H3Q8IVL6 736 aa29.24■■■□□ 2.27
LGI3-202ENST00000424267 CEP164Q9UPV0 1460 aa29.24■■■□□ 2.27
LGI3-202ENST00000424267 BAZ1BQ9UIG0 1483 aaKnown RBP29.23■■■□□ 2.27
LGI3-202ENST00000424267 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
LGI3-202ENST00000424267 VPS8Q8N3P4 1428 aa29.15■■■□□ 2.26
LGI3-202ENST00000424267 HIRIP3Q9BW71 556 aaPredicted RBP29.09■■■□□ 2.25
LGI3-202ENST00000424267 KCNH8Q96L42 1107 aa29.05■■■□□ 2.24
LGI3-202ENST00000424267 KIF21BO75037 1637 aa28.99■■■□□ 2.23
LGI3-202ENST00000424267 FAM50AQ14320 339 aaKnown RBP28.95■■■□□ 2.22
LGI3-202ENST00000424267 DHX57Q6P158 1386 aaKnown RBP28.89■■■□□ 2.22
LGI3-202ENST00000424267 BCANQ96GW7 911 aa28.88■■■□□ 2.21
LGI3-202ENST00000424267 SIN3AQ96ST3 1273 aa28.87■■■□□ 2.21
LGI3-202ENST00000424267 ARAP1Q96P48 1450 aa28.84■■■□□ 2.21
LGI3-202ENST00000424267 MYT1Q01538 1121 aa28.78■■■□□ 2.2
LGI3-202ENST00000424267 DDX10Q13206 875 aaKnown RBP28.75■■■□□ 2.19
LGI3-202ENST00000424267 PEG3Q9GZU2 1588 aa28.64■■■□□ 2.18
LGI3-202ENST00000424267 CUX1P39880 1505 aa28.64■■■□□ 2.17
LGI3-202ENST00000424267 KIF27Q86VH2 1401 aa28.63■■■□□ 2.17
LGI3-202ENST00000424267 CCNB3Q8WWL7 1395 aa28.62■■■□□ 2.17
LGI3-202ENST00000424267 ARID3CA6NKF2 412 aa28.62■■■□□ 2.17
LGI3-202ENST00000424267 PRXQ9BXM0 1461 aa28.61■■■□□ 2.17
LGI3-202ENST00000424267 SUPT16HQ9Y5B9 1047 aaKnown RBP28.61■■■□□ 2.17
LGI3-202ENST00000424267 TOP2BQ02880 1626 aa28.6■■■□□ 2.17
LGI3-202ENST00000424267 RAB3GAP2Q9H2M9 1393 aa28.58■■■□□ 2.16
LGI3-202ENST00000424267 CUX2O14529 1486 aa28.57■■■□□ 2.16
LGI3-202ENST00000424267 ARHGAP35Q9NRY4 1499 aa28.54■■■□□ 2.16
LGI3-202ENST00000424267 TRIM52Q96A61 297 aa28.53■■■□□ 2.16
LGI3-202ENST00000424267 IGF1RP08069 1367 aa28.47■■■□□ 2.15
LGI3-202ENST00000424267 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
LGI3-202ENST00000424267 CARMIL1Q5VZK9 1371 aa28.42■■■□□ 2.14
LGI3-202ENST00000424267 PHLDB1Q86UU1 1377 aa28.42■■■□□ 2.14
LGI3-202ENST00000424267 FKBP8Q14318 412 aa28.37■■■□□ 2.13
LGI3-202ENST00000424267 CHIC2Q9UKJ5 165 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms