RNA–Protein interactions for RNA: ENST00000334961.11

NF2-201, Transcript of neurofibromin 2, humanhuman

TSL 1 (best) BASIC

Gene NF2, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF2-201ENST00000334961 NISCHQ9Y2I1 1504 aa44.04■■■■■ 4.64
NF2-201ENST00000334961 CCDC180Q9P1Z9 1646 aa38.54■■■■□ 3.76
NF2-201ENST00000334961 ZCCHC6Q5VYS8 1495 aaKnown RBP36.93■■■■□ 3.5
NF2-201ENST00000334961 ABCC9O60706 1549 aa36.72■■■■□ 3.47
NF2-201ENST00000334961 DCAF8L2P0C7V8 631 aa36.44■■■■□ 3.42
NF2-201ENST00000334961 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
NF2-201ENST00000334961 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
NF2-201ENST00000334961 SHROOM4Q9ULL8 1493 aa36.01■■■■□ 3.35
NF2-201ENST00000334961 NACADO15069 1562 aa35.96■■■■□ 3.35
NF2-201ENST00000334961 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
NF2-201ENST00000334961 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
NF2-201ENST00000334961 SUPT5HO00267 1087 aaKnown RBP35.31■■■■□ 3.24
NF2-201ENST00000334961 UNC13AQ9UPW8 1703 aa35.03■■■■□ 3.2
NF2-201ENST00000334961 BICRAQ9NZM4 1560 aa34.69■■■■□ 3.14
NF2-201ENST00000334961 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
NF2-201ENST00000334961 CHIC1Q5VXU3 224 aa34.47■■■■□ 3.11
NF2-201ENST00000334961 CECR2Q9BXF3 1484 aa34.25■■■■□ 3.07
NF2-201ENST00000334961 RSF1Q96T23 1441 aaPredicted RBP34.04■■■■□ 3.04
NF2-201ENST00000334961 MROH2BQ7Z745 1585 aa34.02■■■■□ 3.04
NF2-201ENST00000334961 BAZ1AQ9NRL2 1556 aaPredicted RBP34.02■■■■□ 3.04
NF2-201ENST00000334961 SMARCA4P51532 1647 aa33.92■■■■□ 3.02
NF2-201ENST00000334961 WIZO95785 1651 aa33.73■■■□□ 2.99
NF2-201ENST00000334961 EIF4G1Q04637 1599 aaKnown RBP33.65■■■□□ 2.98
NF2-201ENST00000334961 PEG3Q9GZU2 1588 aa33.52■■■□□ 2.96
NF2-201ENST00000334961 ATAD2BQ9ULI0 1458 aa33.43■■■□□ 2.94
NF2-201ENST00000334961 SMARCA2P51531 1590 aa33.4■■■□□ 2.94
NF2-201ENST00000334961 TOP2AP11388 1531 aaKnown RBP33.35■■■□□ 2.93
NF2-201ENST00000334961 CC2D2AQ9P2K1 1620 aa33.23■■■□□ 2.91
NF2-201ENST00000334961 LOC105371045A0A1W2PR82 267 aa33.22■■■□□ 2.91
NF2-201ENST00000334961 BAZ1BQ9UIG0 1483 aaKnown RBP33.22■■■□□ 2.91
NF2-201ENST00000334961 NCAPD3P42695 1498 aa33.21■■■□□ 2.91
NF2-201ENST00000334961 HRCP23327 699 aa33.15■■■□□ 2.9
NF2-201ENST00000334961 HMGXB3Q12766 1538 aa33.13■■■□□ 2.89
NF2-201ENST00000334961 TRIM41Q8WV44 630 aa33.11■■■□□ 2.89
NF2-201ENST00000334961 PCGF6Q9BYE7 350 aa33.06■■■□□ 2.88
NF2-201ENST00000334961 CCDC88BA6NC98 1476 aa33.01■■■□□ 2.88
NF2-201ENST00000334961 TRIM26Q12899 539 aaPredicted RBP32.74■■■□□ 2.83
NF2-201ENST00000334961 DNAJC5BQ9UF47 199 aa32.69■■■□□ 2.82
NF2-201ENST00000334961 FAM9AQ8IZU1 332 aaPredicted RBP32.54■■■□□ 2.8
NF2-201ENST00000334961 CFTRP13569 1480 aa32.38■■■□□ 2.77
NF2-201ENST00000334961 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
NF2-201ENST00000334961 ABCC8Q09428 1581 aa32.22■■■□□ 2.75
NF2-201ENST00000334961 PRDM2Q13029 1718 aa32.2■■■□□ 2.75
NF2-201ENST00000334961 NESP48681 1621 aa32.15■■■□□ 2.74
NF2-201ENST00000334961 ZEB1P37275 1124 aaPredicted RBP32.13■■■□□ 2.73
NF2-201ENST00000334961 PPARGC1BQ86YN6 1023 aaKnown RBP32.13■■■□□ 2.73
NF2-201ENST00000334961 LAMC3Q9Y6N6 1575 aa32.12■■■□□ 2.73
NF2-201ENST00000334961 EEA1Q15075 1411 aa32.06■■■□□ 2.72
NF2-201ENST00000334961 WRNQ14191 1432 aaPredicted RBP eCLIP32.04■■■□□ 2.72
NF2-201ENST00000334961 EHMT2Q96KQ7 1210 aa32.03■■■□□ 2.72
NF2-201ENST00000334961 FANCD2Q9BXW9 1451 aa31.96■■■□□ 2.71
NF2-201ENST00000334961 SYNJ1O43426 1573 aa31.94■■■□□ 2.7
NF2-201ENST00000334961 PDS5BQ9NTI5 1447 aa31.87■■■□□ 2.69
NF2-201ENST00000334961 SOGA1O94964 1423 aa31.86■■■□□ 2.69
NF2-201ENST00000334961 TNIKQ9UKE5 1360 aa31.84■■■□□ 2.69
NF2-201ENST00000334961 TOP2BQ02880 1626 aa31.83■■■□□ 2.69
NF2-201ENST00000334961 CUX1P39880 1505 aa31.82■■■□□ 2.68
NF2-201ENST00000334961 BIVM-ERCC5R4GMW8 1640 aa31.8■■■□□ 2.68
NF2-201ENST00000334961 CSRNP3Q8WYN3 585 aa31.8■■■□□ 2.68
NF2-201ENST00000334961 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
NF2-201ENST00000334961 KIF21AQ7Z4S6 1674 aa31.77■■■□□ 2.68
NF2-201ENST00000334961 CEP162Q5TB80 1403 aa31.73■■■□□ 2.67
NF2-201ENST00000334961 GOLGA3Q08378 1498 aa31.66■■■□□ 2.66
NF2-201ENST00000334961 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
NF2-201ENST00000334961 DNMBPQ6XZF7 1577 aa31.62■■■□□ 2.65
NF2-201ENST00000334961 URB2Q14146 1524 aaKnown RBP31.6■■■□□ 2.65
NF2-201ENST00000334961 TOPBP1Q92547 1522 aa31.6■■■□□ 2.65
NF2-201ENST00000334961 KIF21BO75037 1637 aa31.54■■■□□ 2.64
NF2-201ENST00000334961 FGD5Q6ZNL6 1462 aa31.52■■■□□ 2.64
NF2-201ENST00000334961 UBTFP17480 764 aaKnown RBP31.51■■■□□ 2.64
NF2-201ENST00000334961 ERCC6Q03468 1493 aa31.5■■■□□ 2.63
NF2-201ENST00000334961 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
NF2-201ENST00000334961 POLA1P09884 1462 aaPredicted RBP31.42■■■□□ 2.62
NF2-201ENST00000334961 WDR62O43379 1518 aa31.34■■■□□ 2.61
NF2-201ENST00000334961 THOC2Q8NI27 1593 aaKnown RBP31.32■■■□□ 2.6
NF2-201ENST00000334961 RAD54L2Q9Y4B4 1467 aa31.31■■■□□ 2.6
NF2-201ENST00000334961 KIF27Q86VH2 1401 aa31.25■■■□□ 2.59
NF2-201ENST00000334961 CUX2O14529 1486 aa31.25■■■□□ 2.59
NF2-201ENST00000334961 ABCA10Q8WWZ4 1543 aa31.23■■■□□ 2.59
NF2-201ENST00000334961 CCER1Q8TC90 406 aaPredicted RBP31.23■■■□□ 2.59
NF2-201ENST00000334961 CLIP1P30622 1438 aa31.21■■■□□ 2.59
NF2-201ENST00000334961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
NF2-201ENST00000334961 WDR97A6NE52 1622 aa31.18■■■□□ 2.58
NF2-201ENST00000334961 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
NF2-201ENST00000334961 RAPGEF2Q9Y4G8 1499 aa31.14■■■□□ 2.58
NF2-201ENST00000334961 VPS8Q8N3P4 1428 aa31.12■■■□□ 2.57
NF2-201ENST00000334961 ERICH3Q5RHP9 1530 aa31.11■■■□□ 2.57
NF2-201ENST00000334961 IFT140Q96RY7 1462 aa31.05■■■□□ 2.56
NF2-201ENST00000334961 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
NF2-201ENST00000334961 PRXQ9BXM0 1461 aa31.03■■■□□ 2.56
NF2-201ENST00000334961 IGF1RP08069 1367 aa31.03■■■□□ 2.56
NF2-201ENST00000334961 ABCA5Q8WWZ7 1642 aa31.01■■■□□ 2.56
NF2-201ENST00000334961 TTBK1Q5TCY1 1321 aaPredicted RBP31.01■■■□□ 2.55
NF2-201ENST00000334961 GAPVD1Q14C86 1478 aa30.95■■■□□ 2.55
NF2-201ENST00000334961 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
NF2-201ENST00000334961 APLP2Q06481 763 aa30.9■■■□□ 2.54
NF2-201ENST00000334961 AQRO60306 1485 aaKnown RBP eCLIP30.89■■■□□ 2.54
NF2-201ENST00000334961 CARMIL1Q5VZK9 1371 aa30.86■■■□□ 2.53
NF2-201ENST00000334961 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
NF2-201ENST00000334961 CUL7Q14999 1698 aa30.8■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms