RNA–Protein interactions for RNA: ENST00000273047.8

RAB5A-201, Transcript of RAB5A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5A, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-201ENST00000273047 NISCHQ9Y2I1 1504 aa42.83■■■■■ 4.45
RAB5A-201ENST00000273047 SHROOM4Q9ULL8 1493 aa36.51■■■■□ 3.43
RAB5A-201ENST00000273047 CCDC180Q9P1Z9 1646 aa36.49■■■■□ 3.43
RAB5A-201ENST00000273047 ZCCHC6Q5VYS8 1495 aaKnown RBP36.13■■■■□ 3.37
RAB5A-201ENST00000273047 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
RAB5A-201ENST00000273047 SUPT5HO00267 1087 aaKnown RBP35.58■■■■□ 3.29
RAB5A-201ENST00000273047 DCAF1Q9Y4B6 1507 aa34.99■■■■□ 3.19
RAB5A-201ENST00000273047 ABCC9O60706 1549 aa34.42■■■■□ 3.1
RAB5A-201ENST00000273047 SCRIBQ14160 1630 aa34.37■■■■□ 3.09
RAB5A-201ENST00000273047 CHIC1Q5VXU3 224 aa34.28■■■■□ 3.08
RAB5A-201ENST00000273047 MYO15BQ96JP2 1530 aa34.1■■■■□ 3.05
RAB5A-201ENST00000273047 NACADO15069 1562 aa33.86■■■■□ 3.01
RAB5A-201ENST00000273047 RSF1Q96T23 1441 aaPredicted RBP33.79■■■■□ 3
RAB5A-201ENST00000273047 CECR2Q9BXF3 1484 aa33.57■■■□□ 2.96
RAB5A-201ENST00000273047 RB1CC1Q8TDY2 1594 aa33.43■■■□□ 2.94
RAB5A-201ENST00000273047 LOC105371045A0A1W2PR82 267 aa33.39■■■□□ 2.94
RAB5A-201ENST00000273047 MROH2BQ7Z745 1585 aa33.37■■■□□ 2.93
RAB5A-201ENST00000273047 WIZO95785 1651 aa33.19■■■□□ 2.9
RAB5A-201ENST00000273047 TRIM41Q8WV44 630 aa33.06■■■□□ 2.88
RAB5A-201ENST00000273047 UNC13AQ9UPW8 1703 aa33.05■■■□□ 2.88
RAB5A-201ENST00000273047 FAM9AQ8IZU1 332 aaPredicted RBP32.94■■■□□ 2.86
RAB5A-201ENST00000273047 PABPN1Q86U42 306 aaKnown RBP eCLIP32.92■■■□□ 2.86
RAB5A-201ENST00000273047 PCGF6Q9BYE7 350 aa32.89■■■□□ 2.86
RAB5A-201ENST00000273047 BAZ1AQ9NRL2 1556 aaPredicted RBP32.89■■■□□ 2.86
RAB5A-201ENST00000273047 EHMT2Q96KQ7 1210 aa32.81■■■□□ 2.84
RAB5A-201ENST00000273047 SMARCA4P51532 1647 aa32.71■■■□□ 2.83
RAB5A-201ENST00000273047 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
RAB5A-201ENST00000273047 TOP2AP11388 1531 aaKnown RBP32.53■■■□□ 2.8
RAB5A-201ENST00000273047 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
RAB5A-201ENST00000273047 HRCP23327 699 aa32.47■■■□□ 2.79
RAB5A-201ENST00000273047 EIF4G1Q04637 1599 aaKnown RBP32.44■■■□□ 2.78
RAB5A-201ENST00000273047 SMARCA2P51531 1590 aa32.4■■■□□ 2.78
RAB5A-201ENST00000273047 ABCC8Q09428 1581 aa32.35■■■□□ 2.77
RAB5A-201ENST00000273047 TRIM26Q12899 539 aaPredicted RBP32.2■■■□□ 2.75
RAB5A-201ENST00000273047 PPARGC1BQ86YN6 1023 aaKnown RBP32.09■■■□□ 2.73
RAB5A-201ENST00000273047 PEG3Q9GZU2 1588 aa32.01■■■□□ 2.71
RAB5A-201ENST00000273047 ATAD2BQ9ULI0 1458 aa31.99■■■□□ 2.71
RAB5A-201ENST00000273047 SOGA1O94964 1423 aa31.96■■■□□ 2.71
RAB5A-201ENST00000273047 BAZ1BQ9UIG0 1483 aaKnown RBP31.89■■■□□ 2.7
RAB5A-201ENST00000273047 RUSC2Q8N2Y8 1516 aa31.86■■■□□ 2.69
RAB5A-201ENST00000273047 WRNQ14191 1432 aaPredicted RBP eCLIP31.74■■■□□ 2.67
RAB5A-201ENST00000273047 CSRNP3Q8WYN3 585 aa31.67■■■□□ 2.66
RAB5A-201ENST00000273047 SYNJ1O43426 1573 aa31.64■■■□□ 2.66
RAB5A-201ENST00000273047 TTBK1Q5TCY1 1321 aaPredicted RBP31.61■■■□□ 2.65
RAB5A-201ENST00000273047 UBTFP17480 764 aaKnown RBP31.59■■■□□ 2.65
RAB5A-201ENST00000273047 CEP162Q5TB80 1403 aa31.54■■■□□ 2.64
RAB5A-201ENST00000273047 EEA1Q15075 1411 aa31.46■■■□□ 2.63
RAB5A-201ENST00000273047 TNIKQ9UKE5 1360 aa31.44■■■□□ 2.62
RAB5A-201ENST00000273047 NCAPD3P42695 1498 aa31.37■■■□□ 2.61
RAB5A-201ENST00000273047 GOLGA3Q08378 1498 aa31.34■■■□□ 2.61
RAB5A-201ENST00000273047 HMGXB3Q12766 1538 aa31.3■■■□□ 2.6
RAB5A-201ENST00000273047 RANGAP1P46060 587 aaPredicted RBP31.27■■■□□ 2.6
RAB5A-201ENST00000273047 TOP2BQ02880 1626 aa31.2■■■□□ 2.59
RAB5A-201ENST00000273047 CEP164Q9UPV0 1460 aa31.19■■■□□ 2.58
RAB5A-201ENST00000273047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.19■■■□□ 2.58
RAB5A-201ENST00000273047 RAPGEF2Q9Y4G8 1499 aa31.16■■■□□ 2.58
RAB5A-201ENST00000273047 ZEB1P37275 1124 aaPredicted RBP31.16■■■□□ 2.58
RAB5A-201ENST00000273047 KIF21BO75037 1637 aa31.12■■■□□ 2.57
RAB5A-201ENST00000273047 BIVM-ERCC5R4GMW8 1640 aa31.07■■■□□ 2.56
RAB5A-201ENST00000273047 CUX1P39880 1505 aa31.07■■■□□ 2.56
RAB5A-201ENST00000273047 CFTRP13569 1480 aa31.04■■■□□ 2.56
RAB5A-201ENST00000273047 CLIP1P30622 1438 aa31.03■■■□□ 2.56
RAB5A-201ENST00000273047 CCER1Q8TC90 406 aaPredicted RBP30.98■■■□□ 2.55
RAB5A-201ENST00000273047 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
RAB5A-201ENST00000273047 CADPSQ9ULU8 1353 aa30.8■■■□□ 2.52
RAB5A-201ENST00000273047 PRXQ9BXM0 1461 aa30.8■■■□□ 2.52
RAB5A-201ENST00000273047 VPS8Q8N3P4 1428 aa30.79■■■□□ 2.52
RAB5A-201ENST00000273047 KIF27Q86VH2 1401 aa30.76■■■□□ 2.52
RAB5A-201ENST00000273047 PRDM2Q13029 1718 aa30.71■■■□□ 2.51
RAB5A-201ENST00000273047 HNRNPUL2Q1KMD3 747 aaKnown RBP30.7■■■□□ 2.51
RAB5A-201ENST00000273047 APLP2Q06481 763 aa30.7■■■□□ 2.5
RAB5A-201ENST00000273047 PELP1Q8IZL8 1130 aaKnown RBP30.69■■■□□ 2.5
RAB5A-201ENST00000273047 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
RAB5A-201ENST00000273047 CUX2O14529 1486 aa30.63■■■□□ 2.49
RAB5A-201ENST00000273047 FGD5Q6ZNL6 1462 aa30.58■■■□□ 2.49
RAB5A-201ENST00000273047 ARAP1Q96P48 1450 aa30.58■■■□□ 2.49
RAB5A-201ENST00000273047 NESP48681 1621 aa30.57■■■□□ 2.48
RAB5A-201ENST00000273047 FANCD2Q9BXW9 1451 aa30.54■■■□□ 2.48
RAB5A-201ENST00000273047 IGF1RP08069 1367 aa30.53■■■□□ 2.48
RAB5A-201ENST00000273047 DNAJC5BQ9UF47 199 aa30.51■■■□□ 2.48
RAB5A-201ENST00000273047 KANK4Q5T7N3 995 aaPredicted RBP30.49■■■□□ 2.47
RAB5A-201ENST00000273047 SCAF1Q9H7N4 1312 aaKnown RBP30.46■■■□□ 2.47
RAB5A-201ENST00000273047 RAD54L2Q9Y4B4 1467 aa30.4■■■□□ 2.46
RAB5A-201ENST00000273047 ARHGAP35Q9NRY4 1499 aa30.4■■■□□ 2.46
RAB5A-201ENST00000273047 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
RAB5A-201ENST00000273047 TOPBP1Q92547 1522 aa30.28■■■□□ 2.44
RAB5A-201ENST00000273047 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
RAB5A-201ENST00000273047 P3H3Q8IVL6 736 aa30.26■■■□□ 2.43
RAB5A-201ENST00000273047 DNMBPQ6XZF7 1577 aa30.25■■■□□ 2.43
RAB5A-201ENST00000273047 URB2Q14146 1524 aaKnown RBP30.14■■■□□ 2.42
RAB5A-201ENST00000273047 ABCA10Q8WWZ4 1543 aa30.13■■■□□ 2.41
RAB5A-201ENST00000273047 ITGAEP38570 1179 aa30.12■■■□□ 2.41
RAB5A-201ENST00000273047 DIEXFQ68CQ4 756 aaKnown RBP30.1■■■□□ 2.41
RAB5A-201ENST00000273047 ATP1B4Q9UN42 357 aaPredicted RBP30.1■■■□□ 2.41
RAB5A-201ENST00000273047 LAMC3Q9Y6N6 1575 aa30.08■■■□□ 2.41
RAB5A-201ENST00000273047 TDRD9Q8NDG6 1382 aaKnown RBP30.07■■■□□ 2.4
RAB5A-201ENST00000273047 RRBP1Q9P2E9 1410 aaKnown RBP29.99■■■□□ 2.39
RAB5A-201ENST00000273047 FHOD3Q2V2M9 1422 aa29.98■■■□□ 2.39
RAB5A-201ENST00000273047 KIF21AQ7Z4S6 1674 aa29.97■■■□□ 2.39
RAB5A-201ENST00000273047 CCNB3Q8WWL7 1395 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms