RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
TTC39C-202ENST00000317571 CCDC180Q9P1Z9 1646 aa37.85■■■■□ 3.65
TTC39C-202ENST00000317571 ZCCHC6Q5VYS8 1495 aaKnown RBP37.35■■■■□ 3.57
TTC39C-202ENST00000317571 SHROOM4Q9ULL8 1493 aa37.21■■■■□ 3.55
TTC39C-202ENST00000317571 DCAF8L2P0C7V8 631 aa36.44■■■■□ 3.42
TTC39C-202ENST00000317571 DCAF1Q9Y4B6 1507 aa36.33■■■■□ 3.41
TTC39C-202ENST00000317571 SUPT5HO00267 1087 aaKnown RBP36.24■■■■□ 3.39
TTC39C-202ENST00000317571 MYO15BQ96JP2 1530 aa35.43■■■■□ 3.26
TTC39C-202ENST00000317571 SCRIBQ14160 1630 aa35.31■■■■□ 3.24
TTC39C-202ENST00000317571 ABCC9O60706 1549 aa35.23■■■■□ 3.23
TTC39C-202ENST00000317571 CHIC1Q5VXU3 224 aa35.16■■■■□ 3.22
TTC39C-202ENST00000317571 NACADO15069 1562 aa35.01■■■■□ 3.2
TTC39C-202ENST00000317571 RSF1Q96T23 1441 aaPredicted RBP34.8■■■■□ 3.16
TTC39C-202ENST00000317571 CECR2Q9BXF3 1484 aa34.5■■■■□ 3.11
TTC39C-202ENST00000317571 RB1CC1Q8TDY2 1594 aa34.5■■■■□ 3.11
TTC39C-202ENST00000317571 MROH2BQ7Z745 1585 aa34.35■■■■□ 3.09
TTC39C-202ENST00000317571 WIZO95785 1651 aa34.15■■■■□ 3.06
TTC39C-202ENST00000317571 UNC13AQ9UPW8 1703 aa34.12■■■■□ 3.05
TTC39C-202ENST00000317571 LOC105371045A0A1W2PR82 267 aa34.04■■■■□ 3.04
TTC39C-202ENST00000317571 BAZ1AQ9NRL2 1556 aaPredicted RBP33.96■■■■□ 3.03
TTC39C-202ENST00000317571 TRIM41Q8WV44 630 aa33.8■■■■□ 3
TTC39C-202ENST00000317571 SMARCA4P51532 1647 aa33.77■■■■□ 3
TTC39C-202ENST00000317571 BICRAQ9NZM4 1560 aa33.69■■■□□ 2.98
TTC39C-202ENST00000317571 EIF4G1Q04637 1599 aaKnown RBP33.65■■■□□ 2.98
TTC39C-202ENST00000317571 TOP2AP11388 1531 aaKnown RBP33.61■■■□□ 2.97
TTC39C-202ENST00000317571 PABPN1Q86U42 306 aaKnown RBP eCLIP33.54■■■□□ 2.96
TTC39C-202ENST00000317571 PCGF6Q9BYE7 350 aa33.54■■■□□ 2.96
TTC39C-202ENST00000317571 FAM9AQ8IZU1 332 aaPredicted RBP33.48■■■□□ 2.95
TTC39C-202ENST00000317571 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
TTC39C-202ENST00000317571 CCDC88BA6NC98 1476 aa33.42■■■□□ 2.94
TTC39C-202ENST00000317571 HRCP23327 699 aa33.33■■■□□ 2.93
TTC39C-202ENST00000317571 ABCC8Q09428 1581 aa33.22■■■□□ 2.91
TTC39C-202ENST00000317571 PEG3Q9GZU2 1588 aa33.19■■■□□ 2.9
TTC39C-202ENST00000317571 EHMT2Q96KQ7 1210 aa33.16■■■□□ 2.9
TTC39C-202ENST00000317571 TRIM26Q12899 539 aaPredicted RBP33.03■■■□□ 2.88
TTC39C-202ENST00000317571 ATAD2BQ9ULI0 1458 aa32.97■■■□□ 2.87
TTC39C-202ENST00000317571 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
TTC39C-202ENST00000317571 SOGA1O94964 1423 aa32.79■■■□□ 2.84
TTC39C-202ENST00000317571 PPARGC1BQ86YN6 1023 aaKnown RBP32.72■■■□□ 2.83
TTC39C-202ENST00000317571 RUSC2Q8N2Y8 1516 aa32.69■■■□□ 2.82
TTC39C-202ENST00000317571 WRNQ14191 1432 aaPredicted RBP eCLIP32.66■■■□□ 2.82
TTC39C-202ENST00000317571 SYNJ1O43426 1573 aa32.61■■■□□ 2.81
TTC39C-202ENST00000317571 EEA1Q15075 1411 aa32.53■■■□□ 2.8
TTC39C-202ENST00000317571 CSRNP3Q8WYN3 585 aa32.47■■■□□ 2.79
TTC39C-202ENST00000317571 CEP162Q5TB80 1403 aa32.43■■■□□ 2.78
TTC39C-202ENST00000317571 TNIKQ9UKE5 1360 aa32.41■■■□□ 2.78
TTC39C-202ENST00000317571 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
TTC39C-202ENST00000317571 NCAPD3P42695 1498 aa32.4■■■□□ 2.78
TTC39C-202ENST00000317571 GOLGA3Q08378 1498 aa32.3■■■□□ 2.76
TTC39C-202ENST00000317571 TOP2BQ02880 1626 aa32.23■■■□□ 2.75
TTC39C-202ENST00000317571 UBTFP17480 764 aaKnown RBP32.21■■■□□ 2.75
TTC39C-202ENST00000317571 KIF21BO75037 1637 aa32.2■■■□□ 2.74
TTC39C-202ENST00000317571 BIVM-ERCC5R4GMW8 1640 aa32.16■■■□□ 2.74
TTC39C-202ENST00000317571 CEP164Q9UPV0 1460 aa32.15■■■□□ 2.74
TTC39C-202ENST00000317571 ZEB1P37275 1124 aaPredicted RBP32.05■■■□□ 2.72
TTC39C-202ENST00000317571 CFTRP13569 1480 aa32.03■■■□□ 2.72
TTC39C-202ENST00000317571 RAPGEF2Q9Y4G8 1499 aa32.02■■■□□ 2.72
TTC39C-202ENST00000317571 CUX1P39880 1505 aa32.01■■■□□ 2.72
TTC39C-202ENST00000317571 TTBK1Q5TCY1 1321 aaPredicted RBP32■■■□□ 2.71
TTC39C-202ENST00000317571 CLIP1P30622 1438 aa31.89■■■□□ 2.69
TTC39C-202ENST00000317571 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
TTC39C-202ENST00000317571 CC2D2AQ9P2K1 1620 aa31.81■■■□□ 2.68
TTC39C-202ENST00000317571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.8■■■□□ 2.68
TTC39C-202ENST00000317571 PRXQ9BXM0 1461 aa31.79■■■□□ 2.68
TTC39C-202ENST00000317571 ERICH3Q5RHP9 1530 aa31.74■■■□□ 2.67
TTC39C-202ENST00000317571 VPS8Q8N3P4 1428 aa31.73■■■□□ 2.67
TTC39C-202ENST00000317571 CADPSQ9ULU8 1353 aa31.69■■■□□ 2.66
TTC39C-202ENST00000317571 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
TTC39C-202ENST00000317571 RANGAP1P46060 587 aaPredicted RBP31.65■■■□□ 2.66
TTC39C-202ENST00000317571 CCER1Q8TC90 406 aaPredicted RBP31.61■■■□□ 2.65
TTC39C-202ENST00000317571 ARAP1Q96P48 1450 aa31.52■■■□□ 2.64
TTC39C-202ENST00000317571 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
TTC39C-202ENST00000317571 CUX2O14529 1486 aa31.46■■■□□ 2.63
TTC39C-202ENST00000317571 FANCD2Q9BXW9 1451 aa31.4■■■□□ 2.62
TTC39C-202ENST00000317571 IGF1RP08069 1367 aa31.39■■■□□ 2.62
TTC39C-202ENST00000317571 NESP48681 1621 aa31.34■■■□□ 2.61
TTC39C-202ENST00000317571 APLP2Q06481 763 aa31.33■■■□□ 2.61
TTC39C-202ENST00000317571 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
TTC39C-202ENST00000317571 HNRNPUL2Q1KMD3 747 aaKnown RBP31.28■■■□□ 2.6
TTC39C-202ENST00000317571 DNMBPQ6XZF7 1577 aa31.24■■■□□ 2.59
TTC39C-202ENST00000317571 KANK4Q5T7N3 995 aaPredicted RBP31.2■■■□□ 2.59
TTC39C-202ENST00000317571 CARMIL1Q5VZK9 1371 aa31.2■■■□□ 2.59
TTC39C-202ENST00000317571 TOPBP1Q92547 1522 aa31.19■■■□□ 2.58
TTC39C-202ENST00000317571 RAD54L2Q9Y4B4 1467 aa31.18■■■□□ 2.58
TTC39C-202ENST00000317571 POLA1P09884 1462 aaPredicted RBP31.15■■■□□ 2.58
TTC39C-202ENST00000317571 ABCA10Q8WWZ4 1543 aa31.11■■■□□ 2.57
TTC39C-202ENST00000317571 DNAJC5BQ9UF47 199 aa31.09■■■□□ 2.57
TTC39C-202ENST00000317571 LAMC3Q9Y6N6 1575 aa31.07■■■□□ 2.56
TTC39C-202ENST00000317571 URB2Q14146 1524 aaKnown RBP31.03■■■□□ 2.56
TTC39C-202ENST00000317571 RRBP1Q9P2E9 1410 aaKnown RBP30.96■■■□□ 2.55
TTC39C-202ENST00000317571 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
TTC39C-202ENST00000317571 TIAM1Q13009 1591 aa30.89■■■□□ 2.54
TTC39C-202ENST00000317571 CUL7Q14999 1698 aa30.87■■■□□ 2.53
TTC39C-202ENST00000317571 KIF21AQ7Z4S6 1674 aa30.85■■■□□ 2.53
TTC39C-202ENST00000317571 MAP3K1Q13233 1512 aa30.83■■■□□ 2.53
TTC39C-202ENST00000317571 ABCA5Q8WWZ7 1642 aa30.81■■■□□ 2.52
TTC39C-202ENST00000317571 PCF11O94913 1555 aaKnown RBP30.8■■■□□ 2.52
TTC39C-202ENST00000317571 PDS5BQ9NTI5 1447 aa30.79■■■□□ 2.52
TTC39C-202ENST00000317571 DIEXFQ68CQ4 756 aaKnown RBP30.79■■■□□ 2.52
TTC39C-202ENST00000317571 CCNB3Q8WWL7 1395 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms