RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 NISCHQ9Y2I1 1504 aa44.21■■■■■ 4.67
PBX1-222ENST00000627490 CCDC180Q9P1Z9 1646 aa38.89■■■■□ 3.82
PBX1-222ENST00000627490 ZCCHC6Q5VYS8 1495 aaKnown RBP37.09■■■■□ 3.53
PBX1-222ENST00000627490 ABCC9O60706 1549 aa36.81■■■■□ 3.48
PBX1-222ENST00000627490 DCAF1Q9Y4B6 1507 aa36.71■■■■□ 3.47
PBX1-222ENST00000627490 MYO15BQ96JP2 1530 aa36.47■■■■□ 3.43
PBX1-222ENST00000627490 DCAF8L2P0C7V8 631 aa36.27■■■■□ 3.4
PBX1-222ENST00000627490 NACADO15069 1562 aa36.26■■■■□ 3.39
PBX1-222ENST00000627490 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
PBX1-222ENST00000627490 SCRIBQ14160 1630 aa35.46■■■■□ 3.27
PBX1-222ENST00000627490 SHROOM4Q9ULL8 1493 aa35.45■■■■□ 3.27
PBX1-222ENST00000627490 UNC13AQ9UPW8 1703 aa35.25■■■■□ 3.23
PBX1-222ENST00000627490 BICRAQ9NZM4 1560 aa34.89■■■■□ 3.18
PBX1-222ENST00000627490 PABPN1Q86U42 306 aaKnown RBP eCLIP34.53■■■■□ 3.12
PBX1-222ENST00000627490 SUPT5HO00267 1087 aaKnown RBP34.46■■■■□ 3.11
PBX1-222ENST00000627490 CECR2Q9BXF3 1484 aa34.26■■■■□ 3.08
PBX1-222ENST00000627490 BAZ1AQ9NRL2 1556 aaPredicted RBP34.2■■■■□ 3.07
PBX1-222ENST00000627490 SMARCA4P51532 1647 aa34.09■■■■□ 3.05
PBX1-222ENST00000627490 RSF1Q96T23 1441 aaPredicted RBP34.08■■■■□ 3.05
PBX1-222ENST00000627490 MROH2BQ7Z745 1585 aa34.07■■■■□ 3.04
PBX1-222ENST00000627490 EIF4G1Q04637 1599 aaKnown RBP33.86■■■■□ 3.01
PBX1-222ENST00000627490 PEG3Q9GZU2 1588 aa33.79■■■■□ 3
PBX1-222ENST00000627490 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
PBX1-222ENST00000627490 WIZO95785 1651 aa33.76■■■■□ 3
PBX1-222ENST00000627490 SMARCA2P51531 1590 aa33.63■■■□□ 2.97
PBX1-222ENST00000627490 ATAD2BQ9ULI0 1458 aa33.59■■■□□ 2.97
PBX1-222ENST00000627490 TOP2AP11388 1531 aaKnown RBP33.5■■■□□ 2.95
PBX1-222ENST00000627490 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
PBX1-222ENST00000627490 CC2D2AQ9P2K1 1620 aa33.42■■■□□ 2.94
PBX1-222ENST00000627490 HMGXB3Q12766 1538 aa33.4■■■□□ 2.94
PBX1-222ENST00000627490 BAZ1BQ9UIG0 1483 aaKnown RBP33.36■■■□□ 2.93
PBX1-222ENST00000627490 CCDC88BA6NC98 1476 aa33.06■■■□□ 2.88
PBX1-222ENST00000627490 HRCP23327 699 aa32.86■■■□□ 2.85
PBX1-222ENST00000627490 DNAJC5BQ9UF47 199 aa32.74■■■□□ 2.83
PBX1-222ENST00000627490 PCGF6Q9BYE7 350 aa32.56■■■□□ 2.8
PBX1-222ENST00000627490 CFTRP13569 1480 aa32.55■■■□□ 2.8
PBX1-222ENST00000627490 LOC105371045A0A1W2PR82 267 aa32.52■■■□□ 2.8
PBX1-222ENST00000627490 PRDM2Q13029 1718 aa32.48■■■□□ 2.79
PBX1-222ENST00000627490 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
PBX1-222ENST00000627490 LAMC3Q9Y6N6 1575 aa32.38■■■□□ 2.77
PBX1-222ENST00000627490 TRIM41Q8WV44 630 aa32.33■■■□□ 2.77
PBX1-222ENST00000627490 TRIM26Q12899 539 aaPredicted RBP32.26■■■□□ 2.75
PBX1-222ENST00000627490 NESP48681 1621 aa32.2■■■□□ 2.75
PBX1-222ENST00000627490 ABCC8Q09428 1581 aa32.17■■■□□ 2.74
PBX1-222ENST00000627490 WRNQ14191 1432 aaPredicted RBP eCLIP32.1■■■□□ 2.739e-6■■■■■ 50.1
PBX1-222ENST00000627490 FANCD2Q9BXW9 1451 aa32.09■■■□□ 2.73
PBX1-222ENST00000627490 PDS5BQ9NTI5 1447 aa32.07■■■□□ 2.72
PBX1-222ENST00000627490 SYNJ1O43426 1573 aa31.98■■■□□ 2.71
PBX1-222ENST00000627490 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
PBX1-222ENST00000627490 TOP2BQ02880 1626 aa31.96■■■□□ 2.71
PBX1-222ENST00000627490 CEP164Q9UPV0 1460 aa31.96■■■□□ 2.71
PBX1-222ENST00000627490 KIF21AQ7Z4S6 1674 aa31.93■■■□□ 2.7
PBX1-222ENST00000627490 CUX1P39880 1505 aa31.9■■■□□ 2.7
PBX1-222ENST00000627490 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
PBX1-222ENST00000627490 ZEB1P37275 1124 aaPredicted RBP31.8■■■□□ 2.68
PBX1-222ENST00000627490 PPARGC1BQ86YN6 1023 aaKnown RBP31.74■■■□□ 2.67
PBX1-222ENST00000627490 FAM9AQ8IZU1 332 aaPredicted RBP31.74■■■□□ 2.67
PBX1-222ENST00000627490 TOPBP1Q92547 1522 aa31.73■■■□□ 2.67
PBX1-222ENST00000627490 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
PBX1-222ENST00000627490 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
PBX1-222ENST00000627490 ERCC6Q03468 1493 aa31.64■■■□□ 2.66
PBX1-222ENST00000627490 FGD5Q6ZNL6 1462 aa31.6■■■□□ 2.65
PBX1-222ENST00000627490 WDR62O43379 1518 aa31.58■■■□□ 2.65
PBX1-222ENST00000627490 THOC2Q8NI27 1593 aaKnown RBP31.57■■■□□ 2.64
PBX1-222ENST00000627490 EEA1Q15075 1411 aa31.54■■■□□ 2.64
PBX1-222ENST00000627490 POLA1P09884 1462 aaPredicted RBP31.53■■■□□ 2.64
PBX1-222ENST00000627490 SOGA1O94964 1423 aa31.47■■■□□ 2.63
PBX1-222ENST00000627490 ABCA10Q8WWZ4 1543 aa31.39■■■□□ 2.62
PBX1-222ENST00000627490 WDR97A6NE52 1622 aa31.38■■■□□ 2.61
PBX1-222ENST00000627490 RUSC2Q8N2Y8 1516 aa31.36■■■□□ 2.61
PBX1-222ENST00000627490 KIF27Q86VH2 1401 aa31.34■■■□□ 2.61
PBX1-222ENST00000627490 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
PBX1-222ENST00000627490 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
PBX1-222ENST00000627490 CUX2O14529 1486 aa31.31■■■□□ 2.6
PBX1-222ENST00000627490 IFT140Q96RY7 1462 aa31.25■■■□□ 2.59
PBX1-222ENST00000627490 CSRNP3Q8WYN3 585 aa31.22■■■□□ 2.59
PBX1-222ENST00000627490 EHMT2Q96KQ7 1210 aa31.2■■■□□ 2.59
PBX1-222ENST00000627490 ABCA5Q8WWZ7 1642 aa31.19■■■□□ 2.58
PBX1-222ENST00000627490 TNIKQ9UKE5 1360 aa31.16■■■□□ 2.58
PBX1-222ENST00000627490 KIF21BO75037 1637 aa31.14■■■□□ 2.58
PBX1-222ENST00000627490 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
PBX1-222ENST00000627490 IGF1RP08069 1367 aa31.06■■■□□ 2.56
PBX1-222ENST00000627490 PRXQ9BXM0 1461 aa31.06■■■□□ 2.56
PBX1-222ENST00000627490 CEP162Q5TB80 1403 aa31.06■■■□□ 2.56
PBX1-222ENST00000627490 ERICH3Q5RHP9 1530 aa31.05■■■□□ 2.56
PBX1-222ENST00000627490 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
PBX1-222ENST00000627490 CUL7Q14999 1698 aa31■■■□□ 2.55
PBX1-222ENST00000627490 GOLGA3Q08378 1498 aa31■■■□□ 2.55
PBX1-222ENST00000627490 PBRM1Q86U86 1689 aa30.99■■■□□ 2.55
PBX1-222ENST00000627490 ZNF608Q9ULD9 1512 aaPredicted RBP30.97■■■□□ 2.55
PBX1-222ENST00000627490 EIF4G3O43432 1585 aaKnown RBP30.96■■■□□ 2.55
PBX1-222ENST00000627490 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.54
PBX1-222ENST00000627490 GRIN2BQ13224 1484 aa30.92■■■□□ 2.54
PBX1-222ENST00000627490 CARMIL1Q5VZK9 1371 aa30.89■■■□□ 2.54
PBX1-222ENST00000627490 RAPGEF2Q9Y4G8 1499 aa30.89■■■□□ 2.54
PBX1-222ENST00000627490 ADAMTS12P58397 1594 aa30.8■■■□□ 2.52
PBX1-222ENST00000627490 FHAD1B1AJZ9 1412 aa30.75■■■□□ 2.51
PBX1-222ENST00000627490 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
PBX1-222ENST00000627490 UBTFP17480 764 aaKnown RBP30.74■■■□□ 2.51
PBX1-222ENST00000627490 CCER1Q8TC90 406 aaPredicted RBP30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms