RNA–Protein interactions for RNA: ENST00000222990.7

SNX8-201, Transcript of sorting nexin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX8, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-201ENST00000222990 NISCHQ9Y2I1 1504 aa35.26■■■■□ 3.24
SNX8-201ENST00000222990 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
SNX8-201ENST00000222990 SUPT5HO00267 1087 aaKnown RBP33.26■■■□□ 2.92
SNX8-201ENST00000222990 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
SNX8-201ENST00000222990 EHMT2Q96KQ7 1210 aa31.54■■■□□ 2.64
SNX8-201ENST00000222990 PCGF6Q9BYE7 350 aa31.23■■■□□ 2.59
SNX8-201ENST00000222990 FAM9AQ8IZU1 332 aaPredicted RBP31.16■■■□□ 2.58
SNX8-201ENST00000222990 TRIM41Q8WV44 630 aa30.88■■■□□ 2.53
SNX8-201ENST00000222990 APLP2Q06481 763 aa30.76■■■□□ 2.52
SNX8-201ENST00000222990 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
SNX8-201ENST00000222990 TTBK1Q5TCY1 1321 aaPredicted RBP30.52■■■□□ 2.48
SNX8-201ENST00000222990 CHIC1Q5VXU3 224 aa30.45■■■□□ 2.47
SNX8-201ENST00000222990 CCER1Q8TC90 406 aaPredicted RBP30.25■■■□□ 2.43
SNX8-201ENST00000222990 TRIM26Q12899 539 aaPredicted RBP30.17■■■□□ 2.42
SNX8-201ENST00000222990 PELP1Q8IZL8 1130 aaKnown RBP30.17■■■□□ 2.42
SNX8-201ENST00000222990 UBTFP17480 764 aaKnown RBP30.16■■■□□ 2.42
SNX8-201ENST00000222990 HRCP23327 699 aa30.15■■■□□ 2.42
SNX8-201ENST00000222990 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
SNX8-201ENST00000222990 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
SNX8-201ENST00000222990 CENPBP07199 599 aaPredicted RBP29.97■■■□□ 2.39
SNX8-201ENST00000222990 PPARGC1BQ86YN6 1023 aaKnown RBP29.91■■■□□ 2.38
SNX8-201ENST00000222990 ATP1B4Q9UN42 357 aaPredicted RBP29.6■■■□□ 2.33
SNX8-201ENST00000222990 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.29
SNX8-201ENST00000222990 ABCC9O60706 1549 aa29.39■■■□□ 2.29
SNX8-201ENST00000222990 YTHDC1Q96MU7 727 aaKnown RBP29.34■■■□□ 2.29
SNX8-201ENST00000222990 HNRNPUL2Q1KMD3 747 aaKnown RBP29.18■■■□□ 2.26
SNX8-201ENST00000222990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.14■■■□□ 2.25
SNX8-201ENST00000222990 ITGAEP38570 1179 aa29.03■■■□□ 2.24
SNX8-201ENST00000222990 PABPN1Q86U42 306 aaKnown RBP eCLIP29.01■■■□□ 2.23
SNX8-201ENST00000222990 CCDC180Q9P1Z9 1646 aa28.99■■■□□ 2.23
SNX8-201ENST00000222990 NEFLP07196 543 aa28.95■■■□□ 2.22
SNX8-201ENST00000222990 DIEXFQ68CQ4 756 aaKnown RBP28.86■■■□□ 2.21
SNX8-201ENST00000222990 ERICH6Q7L0X2 663 aa28.77■■■□□ 2.2
SNX8-201ENST00000222990 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
SNX8-201ENST00000222990 DCAF1Q9Y4B6 1507 aa28.71■■■□□ 2.19
SNX8-201ENST00000222990 CSRNP3Q8WYN3 585 aa28.64■■■□□ 2.18
SNX8-201ENST00000222990 MYT1Q01538 1121 aa28.58■■■□□ 2.17
SNX8-201ENST00000222990 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
SNX8-201ENST00000222990 FAM50AQ14320 339 aaKnown RBP28.43■■■□□ 2.14
SNX8-201ENST00000222990 ZNF316A6NFI3 1004 aaPredicted RBP28.35■■■□□ 2.13
SNX8-201ENST00000222990 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
SNX8-201ENST00000222990 POLR3GLQ9BT43 218 aa28.27■■■□□ 2.12
SNX8-201ENST00000222990 GTF3C3Q9Y5Q9 886 aa28.25■■■□□ 2.11
SNX8-201ENST00000222990 NEUROD1Q13562 356 aa28.2■■■□□ 2.1
SNX8-201ENST00000222990 ACIN1Q9UKV3 1341 aaKnown RBP28.1■■■□□ 2.09
SNX8-201ENST00000222990 TRIM52Q96A61 297 aa28.06■■■□□ 2.08
SNX8-201ENST00000222990 CNGB1Q14028 1251 aaPredicted RBP28.04■■■□□ 2.08
SNX8-201ENST00000222990 P3H3Q8IVL6 736 aa27.97■■■□□ 2.07
SNX8-201ENST00000222990 MYT1LQ9UL68 1186 aa27.96■■■□□ 2.07
SNX8-201ENST00000222990 ANP32CO43423 234 aa27.91■■■□□ 2.06
SNX8-201ENST00000222990 NACADO15069 1562 aa27.9■■■□□ 2.06
SNX8-201ENST00000222990 RB1CC1Q8TDY2 1594 aa27.89■■■□□ 2.06
SNX8-201ENST00000222990 EEA1Q15075 1411 aa27.79■■■□□ 2.04
SNX8-201ENST00000222990 BCANQ96GW7 911 aa27.74■■■□□ 2.03
SNX8-201ENST00000222990 CLIP1P30622 1438 aa27.74■■■□□ 2.03
SNX8-201ENST00000222990 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
SNX8-201ENST00000222990 DAXXQ9UER7 740 aaPredicted RBP27.65■■■□□ 2.02
SNX8-201ENST00000222990 GOLGA3Q08378 1498 aa27.65■■■□□ 2.02
SNX8-201ENST00000222990 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
SNX8-201ENST00000222990 ZNF326Q5BKZ1 582 aaKnown RBP27.63■■■□□ 2.01
SNX8-201ENST00000222990 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
SNX8-201ENST00000222990 FBLN2P98095 1184 aa27.6■■■□□ 2.01
SNX8-201ENST00000222990 TNIKQ9UKE5 1360 aa27.59■■■□□ 2.01
SNX8-201ENST00000222990 ARID3CA6NKF2 412 aa27.58■■■□□ 2.01
SNX8-201ENST00000222990 BAZ1AQ9NRL2 1556 aaPredicted RBP27.57■■■□□ 2
SNX8-201ENST00000222990 TONSLQ96HA7 1378 aa27.49■■□□□ 1.99
SNX8-201ENST00000222990 CLSPNQ9HAW4 1339 aa27.48■■□□□ 1.99
SNX8-201ENST00000222990 SCAF1Q9H7N4 1312 aaKnown RBP27.46■■□□□ 1.99
SNX8-201ENST00000222990 CDK11AQ9UQ88 783 aaPredicted RBP27.46■■□□□ 1.99
SNX8-201ENST00000222990 DDX10Q13206 875 aaKnown RBP27.42■■□□□ 1.98
SNX8-201ENST00000222990 MIER1Q8N108 512 aa27.42■■□□□ 1.98
SNX8-201ENST00000222990 CEP164Q9UPV0 1460 aa27.41■■□□□ 1.98
SNX8-201ENST00000222990 SLC4A1APQ9BWU0 796 aaKnown RBP27.41■■□□□ 1.98
SNX8-201ENST00000222990 BAZ1BQ9UIG0 1483 aaKnown RBP27.4■■□□□ 1.98
SNX8-201ENST00000222990 ZNF777Q9ULD5 760 aaPredicted RBP27.36■■□□□ 1.97
SNX8-201ENST00000222990 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
SNX8-201ENST00000222990 RTL5Q5HYW3 569 aaPredicted RBP27.3■■□□□ 1.96
SNX8-201ENST00000222990 MTUS2Q5JR59 1369 aa27.27■■□□□ 1.96
SNX8-201ENST00000222990 SOGA1O94964 1423 aa27.26■■□□□ 1.95
SNX8-201ENST00000222990 FKBP8Q14318 412 aa27.25■■□□□ 1.95
SNX8-201ENST00000222990 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
SNX8-201ENST00000222990 CHIC2Q9UKJ5 165 aa27.22■■□□□ 1.95
SNX8-201ENST00000222990 HNRNPUQ00839 825 aaKnown RBP eCLIP27.18■■□□□ 1.94
SNX8-201ENST00000222990 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
SNX8-201ENST00000222990 ABCC8Q09428 1581 aa27.06■■□□□ 1.92
SNX8-201ENST00000222990 HIRIP3Q9BW71 556 aaPredicted RBP27.04■■□□□ 1.92
SNX8-201ENST00000222990 FAM9BQ8IZU0 186 aa27.03■■□□□ 1.92
SNX8-201ENST00000222990 WIZO95785 1651 aa26.96■■□□□ 1.91
SNX8-201ENST00000222990 RRP7BPQ9NSQ0 103 aa26.96■■□□□ 1.91
SNX8-201ENST00000222990 VPS8Q8N3P4 1428 aa26.95■■□□□ 1.91
SNX8-201ENST00000222990 EIF4G2P78344 907 aaKnown RBP eCLIP26.91■■□□□ 1.9
SNX8-201ENST00000222990 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.9
SNX8-201ENST00000222990 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.9
SNX8-201ENST00000222990 TSPY4P0CV99 314 aa26.89■■□□□ 1.9
SNX8-201ENST00000222990 TSPY10P0CW01 314 aa26.89■■□□□ 1.9
SNX8-201ENST00000222990 MRS2Q9HD23 443 aa26.89■■□□□ 1.89
SNX8-201ENST00000222990 ANP32AP39687 249 aaKnown RBP26.87■■□□□ 1.89
SNX8-201ENST00000222990 CHMP7Q8WUX9 453 aaPredicted RBP26.84■■□□□ 1.89
SNX8-201ENST00000222990 TMC1Q8TDI8 760 aa26.83■■□□□ 1.89
SNX8-201ENST00000222990 CANXP27824 592 aaKnown RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms