Protein–RNA interactions for Protein: Q9NS62

THSD1, Thrombospondin type-1 domain-containing protein 1, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1Q9NS62 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
THSD1Q9NS62 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.44■■□□□ 1.02
THSD1Q9NS62 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.44■■□□□ 1.02
THSD1Q9NS62 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
THSD1Q9NS62 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
THSD1Q9NS62 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
THSD1Q9NS62 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
THSD1Q9NS62 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
THSD1Q9NS62 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
THSD1Q9NS62 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
THSD1Q9NS62 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
THSD1Q9NS62 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
THSD1Q9NS62 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 IGHV3-19-201ENST00000521488 291 ntBASIC21.43■■□□□ 1.02
THSD1Q9NS62 AL354811.1-201ENST00000610286 706 ntBASIC21.43■■□□□ 1.02
THSD1Q9NS62 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
THSD1Q9NS62 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THSD1Q9NS62 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
THSD1Q9NS62 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
THSD1Q9NS62 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
THSD1Q9NS62 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 MIR572-201ENST00000384983 95 ntBASIC21.42■■□□□ 1.02
THSD1Q9NS62 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.42■■□□□ 1.02
THSD1Q9NS62 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.42■■□□□ 1.02
THSD1Q9NS62 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
THSD1Q9NS62 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.41■■□□□ 1.02
THSD1Q9NS62 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
THSD1Q9NS62 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.41■■□□□ 1.02
THSD1Q9NS62 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 AC012414.1-201ENST00000556676 535 ntBASIC21.41■■□□□ 1.02
THSD1Q9NS62 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 AC079834.2-201ENST00000609776 1949 ntBASIC21.41■■□□□ 1.02
THSD1Q9NS62 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
THSD1Q9NS62 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.4■■□□□ 1.02
THSD1Q9NS62 AL161729.1-201ENST00000604104 1402 ntBASIC21.4■■□□□ 1.02
THSD1Q9NS62 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.4■■□□□ 1.02
THSD1Q9NS62 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.4■■□□□ 1.02
THSD1Q9NS62 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.4■■□□□ 1.02
THSD1Q9NS62 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.4■■□□□ 1.02
THSD1Q9NS62 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.4■■□□□ 1.02
THSD1Q9NS62 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
THSD1Q9NS62 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
THSD1Q9NS62 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
THSD1Q9NS62 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
THSD1Q9NS62 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
THSD1Q9NS62 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.39■■□□□ 1.01
THSD1Q9NS62 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.39■■□□□ 1.01
THSD1Q9NS62 MIR6084-201ENST00000622012 110 ntBASIC21.39■■□□□ 1.01
THSD1Q9NS62 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
THSD1Q9NS62 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.39■■□□□ 1.01
THSD1Q9NS62 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.39■■□□□ 1.01
THSD1Q9NS62 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
THSD1Q9NS62 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.38■■□□□ 1.01
THSD1Q9NS62 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.38■■□□□ 1.01
THSD1Q9NS62 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
THSD1Q9NS62 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
THSD1Q9NS62 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
THSD1Q9NS62 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
THSD1Q9NS62 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
THSD1Q9NS62 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THSD1Q9NS62 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
THSD1Q9NS62 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.37■■□□□ 1.01
THSD1Q9NS62 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.37■■□□□ 1.01
THSD1Q9NS62 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms