RNA–Protein interactions for RNA: ENST00000379265.5

TNFRSF18-202, Transcript of TNF receptor superfamily member 18, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF18, Length 705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF18-202ENST00000379265 NISCHQ9Y2I1 1504 aa52.44■■■■■ 5.98
TNFRSF18-202ENST00000379265 CCDC180Q9P1Z9 1646 aa46.83■■■■■ 5.09
TNFRSF18-202ENST00000379265 ABCC9O60706 1549 aa46.75■■■■■ 5.07
TNFRSF18-202ENST00000379265 RB1CC1Q8TDY2 1594 aa44.57■■■■■ 4.73
TNFRSF18-202ENST00000379265 DCAF8L2P0C7V8 631 aa44.56■■■■■ 4.72
TNFRSF18-202ENST00000379265 NACADO15069 1562 aa44.32■■■■■ 4.69
TNFRSF18-202ENST00000379265 MYO15BQ96JP2 1530 aa43.74■■■■■ 4.59
TNFRSF18-202ENST00000379265 PABPN1Q86U42 306 aaKnown RBP eCLIP43.7■■■■■ 4.59
TNFRSF18-202ENST00000379265 DNAJC5BQ9UF47 199 aa43.63■■■■■ 4.57
TNFRSF18-202ENST00000379265 ZCCHC6Q5VYS8 1495 aaKnown RBP43.45■■■■■ 4.55
TNFRSF18-202ENST00000379265 UNC13AQ9UPW8 1703 aa43.36■■■■■ 4.53
TNFRSF18-202ENST00000379265 DCAF1Q9Y4B6 1507 aa43.27■■■■■ 4.52
TNFRSF18-202ENST00000379265 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
TNFRSF18-202ENST00000379265 SCRIBQ14160 1630 aa42.77■■■■■ 4.44
TNFRSF18-202ENST00000379265 SHROOM4Q9ULL8 1493 aa42.64■■■■■ 4.42
TNFRSF18-202ENST00000379265 CC2D2AQ9P2K1 1620 aa42.16■■■■■ 4.34
TNFRSF18-202ENST00000379265 EIF4G1Q04637 1599 aaKnown RBP42.12■■■■■ 4.33
TNFRSF18-202ENST00000379265 CECR2Q9BXF3 1484 aa42.09■■■■■ 4.33
TNFRSF18-202ENST00000379265 NCAPD3P42695 1498 aa40.94■■■■■ 4.14
TNFRSF18-202ENST00000379265 ATAD2BQ9ULI0 1458 aa40.84■■■■■ 4.13
TNFRSF18-202ENST00000379265 SMARCA4P51532 1647 aa40.78■■■■■ 4.12
TNFRSF18-202ENST00000379265 SMARCA2P51531 1590 aa40.74■■■■■ 4.11
TNFRSF18-202ENST00000379265 BAZ1AQ9NRL2 1556 aaPredicted RBP40.7■■■■■ 4.11
TNFRSF18-202ENST00000379265 HMGXB3Q12766 1538 aa40.57■■■■■ 4.08
TNFRSF18-202ENST00000379265 BAZ1BQ9UIG0 1483 aaKnown RBP40.5■■■■■ 4.07
TNFRSF18-202ENST00000379265 ERCC6Q03468 1493 aa40.42■■■■■ 4.06
TNFRSF18-202ENST00000379265 MROH2BQ7Z745 1585 aa40.39■■■■■ 4.06
TNFRSF18-202ENST00000379265 PEG3Q9GZU2 1588 aa40.35■■■■■ 4.05
TNFRSF18-202ENST00000379265 NESP48681 1621 aa40.17■■■■■ 4.02
TNFRSF18-202ENST00000379265 CUX2O14529 1486 aa40.14■■■■■ 4.02
TNFRSF18-202ENST00000379265 DNAJC5Q9H3Z4 198 aa39.96■■■■□ 3.99
TNFRSF18-202ENST00000379265 LAMC3Q9Y6N6 1575 aa39.93■■■■□ 3.98
TNFRSF18-202ENST00000379265 WIZO95785 1651 aa39.89■■■■□ 3.98
TNFRSF18-202ENST00000379265 PDS5BQ9NTI5 1447 aa39.84■■■■□ 3.97
TNFRSF18-202ENST00000379265 CADPSQ9ULU8 1353 aa39.78■■■■□ 3.96
TNFRSF18-202ENST00000379265 RSF1Q96T23 1441 aaPredicted RBP39.71■■■■□ 3.95
TNFRSF18-202ENST00000379265 THOC2Q8NI27 1593 aaKnown RBP39.58■■■■□ 3.93
TNFRSF18-202ENST00000379265 KIF21AQ7Z4S6 1674 aa39.57■■■■□ 3.92
TNFRSF18-202ENST00000379265 TOP2AP11388 1531 aaKnown RBP39.42■■■■□ 3.9
TNFRSF18-202ENST00000379265 MRC2Q9UBG0 1479 aa39.37■■■■□ 3.89
TNFRSF18-202ENST00000379265 CFTRP13569 1480 aa39.3■■■■□ 3.88
TNFRSF18-202ENST00000379265 CEP164Q9UPV0 1460 aa39.3■■■■□ 3.88
TNFRSF18-202ENST00000379265 FANCD2Q9BXW9 1451 aa39.28■■■■□ 3.88
TNFRSF18-202ENST00000379265 WDR62O43379 1518 aa39.18■■■■□ 3.86
TNFRSF18-202ENST00000379265 CCDC88BA6NC98 1476 aa39.05■■■■□ 3.84
TNFRSF18-202ENST00000379265 URB2Q14146 1524 aaKnown RBP38.86■■■■□ 3.81
TNFRSF18-202ENST00000379265 PRDM2Q13029 1718 aa38.75■■■■□ 3.79
TNFRSF18-202ENST00000379265 OSCARQ8IYS5 282 aa38.59■■■■□ 3.77
TNFRSF18-202ENST00000379265 ABCC8Q09428 1581 aa38.57■■■■□ 3.77
TNFRSF18-202ENST00000379265 TOPBP1Q92547 1522 aa38.53■■■■□ 3.76
TNFRSF18-202ENST00000379265 IFT140Q96RY7 1462 aa38.52■■■■□ 3.76
TNFRSF18-202ENST00000379265 TRIM41Q8WV44 630 aa38.43■■■■□ 3.74
TNFRSF18-202ENST00000379265 SUPT5HO00267 1087 aaKnown RBP38.42■■■■□ 3.74
TNFRSF18-202ENST00000379265 DNMBPQ6XZF7 1577 aa38.38■■■■□ 3.73
TNFRSF18-202ENST00000379265 ZNF608Q9ULD9 1512 aaPredicted RBP38.37■■■■□ 3.73
TNFRSF18-202ENST00000379265 AQRO60306 1485 aaKnown RBP eCLIP38.14■■■■□ 3.7
TNFRSF18-202ENST00000379265 POLA1P09884 1462 aaPredicted RBP38.14■■■■□ 3.7
TNFRSF18-202ENST00000379265 SOGA1O94964 1423 aa38.12■■■■□ 3.69
TNFRSF18-202ENST00000379265 EIF4G3O43432 1585 aaKnown RBP38.1■■■■□ 3.69
TNFRSF18-202ENST00000379265 TARBP1Q13395 1621 aaKnown RBP38.07■■■■□ 3.68
TNFRSF18-202ENST00000379265 FBLN2P98095 1184 aa38.06■■■■□ 3.68
TNFRSF18-202ENST00000379265 RAD54L2Q9Y4B4 1467 aa38.04■■■■□ 3.68
TNFRSF18-202ENST00000379265 TDRD9Q8NDG6 1382 aaKnown RBP38■■■■□ 3.67
TNFRSF18-202ENST00000379265 FGD5Q6ZNL6 1462 aa37.96■■■■□ 3.67
TNFRSF18-202ENST00000379265 CUX1P39880 1505 aa37.92■■■■□ 3.66
TNFRSF18-202ENST00000379265 CHMP7Q8WUX9 453 aaPredicted RBP37.79■■■■□ 3.64
TNFRSF18-202ENST00000379265 RIMBP3CA6NJZ7 1639 aa37.77■■■■□ 3.64
TNFRSF18-202ENST00000379265 RIMBP3BA6NNM3 1639 aa37.77■■■■□ 3.64
TNFRSF18-202ENST00000379265 RIMBP3Q9UFD9 1639 aa37.77■■■■□ 3.64
TNFRSF18-202ENST00000379265 CHD1O14646 1710 aa37.75■■■■□ 3.63
TNFRSF18-202ENST00000379265 WDR97A6NE52 1622 aa37.74■■■■□ 3.63
TNFRSF18-202ENST00000379265 ARHGEF11O15085 1522 aa37.71■■■■□ 3.63
TNFRSF18-202ENST00000379265 SNAPC4Q5SXM2 1469 aa37.7■■■■□ 3.63
TNFRSF18-202ENST00000379265 GRIN2BQ13224 1484 aa37.69■■■■□ 3.62
TNFRSF18-202ENST00000379265 CYB5RLQ6IPT4 315 aa37.68■■■■□ 3.62
TNFRSF18-202ENST00000379265 MAGI1Q96QZ7 1491 aaPredicted RBP37.62■■■■□ 3.61
TNFRSF18-202ENST00000379265 GAPVD1Q14C86 1478 aa37.59■■■■□ 3.61
TNFRSF18-202ENST00000379265 WRNQ14191 1432 aaPredicted RBP eCLIP37.55■■■■□ 3.6
TNFRSF18-202ENST00000379265 ABCA10Q8WWZ4 1543 aa37.53■■■■□ 3.6
TNFRSF18-202ENST00000379265 SYNJ2O15056 1496 aa37.51■■■■□ 3.59
TNFRSF18-202ENST00000379265 SYNJ1O43426 1573 aa37.45■■■■□ 3.59
TNFRSF18-202ENST00000379265 PBRM1Q86U86 1689 aa37.39■■■■□ 3.58
TNFRSF18-202ENST00000379265 TOP2BQ02880 1626 aa37.38■■■■□ 3.57
TNFRSF18-202ENST00000379265 ABCA5Q8WWZ7 1642 aa37.35■■■■□ 3.57
TNFRSF18-202ENST00000379265 ARAP1Q96P48 1450 aa37.33■■■■□ 3.57
TNFRSF18-202ENST00000379265 BIVM-ERCC5R4GMW8 1640 aa37.33■■■■□ 3.57
TNFRSF18-202ENST00000379265 CLASP1Q7Z460 1538 aa37.32■■■■□ 3.57
TNFRSF18-202ENST00000379265 TRHP20396 242 aaPredicted RBP37.25■■■■□ 3.55
TNFRSF18-202ENST00000379265 GRIN2AQ12879 1464 aa37.15■■■■□ 3.54
TNFRSF18-202ENST00000379265 FHAD1B1AJZ9 1412 aa37.14■■■■□ 3.54
TNFRSF18-202ENST00000379265 ERICH3Q5RHP9 1530 aa37.07■■■■□ 3.53
TNFRSF18-202ENST00000379265 ADAMTS12P58397 1594 aa37.06■■■■□ 3.52
TNFRSF18-202ENST00000379265 NUP160Q12769 1436 aa36.98■■■■□ 3.51
TNFRSF18-202ENST00000379265 CEP170Q5SW79 1584 aa36.93■■■■□ 3.5
TNFRSF18-202ENST00000379265 JPH4Q96JJ6 628 aa36.84■■■■□ 3.49
TNFRSF18-202ENST00000379265 KIF27Q86VH2 1401 aa36.83■■■■□ 3.49
TNFRSF18-202ENST00000379265 ERCC6L2Q5T890 1561 aa36.78■■■■□ 3.48
TNFRSF18-202ENST00000379265 IGF1RP08069 1367 aa36.77■■■■□ 3.48
TNFRSF18-202ENST00000379265 PRG4Q92954 1404 aaPredicted RBP36.73■■■■□ 3.47
TNFRSF18-202ENST00000379265 SHROOM2Q13796 1616 aa36.7■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms