Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NDUFA1O15239 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFA1O15239 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFA1O15239 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFA1O15239 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFA1O15239 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NDUFA1O15239 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.05■□□□□ 0
NDUFA1O15239 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.05■□□□□ -0
NDUFA1O15239 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 ALDH1A3-203ENST00000557963 1670 ntBASIC15.05■□□□□ -0
NDUFA1O15239 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NDUFA1O15239 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NDUFA1O15239 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
NDUFA1O15239 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NDUFA1O15239 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.04■□□□□ -0
NDUFA1O15239 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC15.04■□□□□ -0
NDUFA1O15239 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NDUFA1O15239 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 KRT18P60-201ENST00000312876 1297 ntBASIC15.04■□□□□ -0
NDUFA1O15239 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 MTX2-204ENST00000443241 799 ntTSL 3 BASIC15.04■□□□□ -0
NDUFA1O15239 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC15.04■□□□□ -0
NDUFA1O15239 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC15.04■□□□□ -0
NDUFA1O15239 AC019171.1-201ENST00000601251 1056 ntBASIC15.04■□□□□ -0
NDUFA1O15239 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
NDUFA1O15239 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NDUFA1O15239 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC15.03■□□□□ -0
NDUFA1O15239 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
NDUFA1O15239 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.03■□□□□ -0
NDUFA1O15239 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.03■□□□□ -0
NDUFA1O15239 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.03■□□□□ -0
NDUFA1O15239 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
NDUFA1O15239 ABHD17AP5-201ENST00000580133 923 ntBASIC15.03■□□□□ -0
NDUFA1O15239 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.03■□□□□ -0
NDUFA1O15239 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
NDUFA1O15239 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
NDUFA1O15239 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
NDUFA1O15239 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.02■□□□□ -0
NDUFA1O15239 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.02■□□□□ -0
NDUFA1O15239 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC15.02■□□□□ -0
NDUFA1O15239 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
NDUFA1O15239 BHLHE23-202ENST00000612929 1109 ntBASIC15.02■□□□□ -0
NDUFA1O15239 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
NDUFA1O15239 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
NDUFA1O15239 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
NDUFA1O15239 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.02□□□□□ -0.01
NDUFA1O15239 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
NDUFA1O15239 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
NDUFA1O15239 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFA1O15239 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.01□□□□□ -0.01
NDUFA1O15239 AC079630.1-202ENST00000618127 1840 ntBASIC15.01□□□□□ -0.01
NDUFA1O15239 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
NDUFA1O15239 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NDUFA1O15239 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 AC026310.3-201ENST00000625186 2373 ntBASIC15.01□□□□□ -0.01
NDUFA1O15239 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC15.01□□□□□ -0.01
NDUFA1O15239 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFA1O15239 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NDUFA1O15239 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NDUFA1O15239 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFA1O15239 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.01□□□□□ -0.01
NDUFA1O15239 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms