RNA–Protein interactions for RNA: ENST00000531126.5

SNHG12-212, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best) BASIC

Gene SNHG12, Length 719 nt, Biotype antisense RNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-212ENST00000531126 NISCHQ9Y2I1 1504 aa54.22■■■■■ 6.27
SNHG12-212ENST00000531126 CCDC180Q9P1Z9 1646 aa47.97■■■■■ 5.27
SNHG12-212ENST00000531126 ABCC9O60706 1549 aa46.07■■■■■ 4.97
SNHG12-212ENST00000531126 ZCCHC6Q5VYS8 1495 aaKnown RBP45.33■■■■■ 4.85
SNHG12-212ENST00000531126 DCAF8L2P0C7V8 631 aa44.99■■■■■ 4.79
SNHG12-212ENST00000531126 DCAF1Q9Y4B6 1507 aa44.99■■■■■ 4.79
SNHG12-212ENST00000531126 MYO15BQ96JP2 1530 aa44.93■■■■■ 4.78
SNHG12-212ENST00000531126 NACADO15069 1562 aa44.93■■■■■ 4.78
SNHG12-212ENST00000531126 RB1CC1Q8TDY2 1594 aa44.8■■■■■ 4.76
SNHG12-212ENST00000531126 SCRIBQ14160 1630 aa43.7■■■■■ 4.59
SNHG12-212ENST00000531126 UNC13AQ9UPW8 1703 aa43.62■■■■■ 4.57
SNHG12-212ENST00000531126 BICRAQ9NZM4 1560 aa43.23■■■■■ 4.51
SNHG12-212ENST00000531126 SHROOM4Q9ULL8 1493 aa43.17■■■■■ 4.5
SNHG12-212ENST00000531126 PABPN1Q86U42 306 aaKnown RBP eCLIP43.12■■■■■ 4.49
SNHG12-212ENST00000531126 EIF4G1Q04637 1599 aaKnown RBP42.11■■■■■ 4.33
SNHG12-212ENST00000531126 BAZ1AQ9NRL2 1556 aaPredicted RBP42.05■■■■■ 4.32
SNHG12-212ENST00000531126 CECR2Q9BXF3 1484 aa42.03■■■■■ 4.32
SNHG12-212ENST00000531126 SMARCA4P51532 1647 aa41.91■■■■■ 4.3
SNHG12-212ENST00000531126 CC2D2AQ9P2K1 1620 aa41.73■■■■■ 4.27
SNHG12-212ENST00000531126 MROH2BQ7Z745 1585 aa41.71■■■■■ 4.27
SNHG12-212ENST00000531126 SMARCA2P51531 1590 aa41.59■■■■■ 4.25
SNHG12-212ENST00000531126 RSF1Q96T23 1441 aaPredicted RBP41.55■■■■■ 4.24
SNHG12-212ENST00000531126 PEG3Q9GZU2 1588 aa41.53■■■■■ 4.24
SNHG12-212ENST00000531126 ATAD2BQ9ULI0 1458 aa41.48■■■■■ 4.23
SNHG12-212ENST00000531126 DNAJC5BQ9UF47 199 aa41.43■■■■■ 4.22
SNHG12-212ENST00000531126 NCAPD3P42695 1498 aa41.39■■■■■ 4.22
SNHG12-212ENST00000531126 WIZO95785 1651 aa41.31■■■■■ 4.2
SNHG12-212ENST00000531126 HMGXB3Q12766 1538 aa41.3■■■■■ 4.2
SNHG12-212ENST00000531126 BAZ1BQ9UIG0 1483 aaKnown RBP41.25■■■■■ 4.19
SNHG12-212ENST00000531126 SUPT5HO00267 1087 aaKnown RBP41.07■■■■■ 4.17
SNHG12-212ENST00000531126 TOP2AP11388 1531 aaKnown RBP41.03■■■■■ 4.16
SNHG12-212ENST00000531126 CCDC88BA6NC98 1476 aa40.46■■■■■ 4.07
SNHG12-212ENST00000531126 LAMC3Q9Y6N6 1575 aa40.23■■■■■ 4.03
SNHG12-212ENST00000531126 CADPSQ9ULU8 1353 aa40.23■■■■■ 4.03
SNHG12-212ENST00000531126 CFTRP13569 1480 aa40.13■■■■■ 4.02
SNHG12-212ENST00000531126 NESP48681 1621 aa40.02■■■■■ 4
SNHG12-212ENST00000531126 PDS5BQ9NTI5 1447 aa39.97■■■■□ 3.99
SNHG12-212ENST00000531126 PRDM2Q13029 1718 aa39.94■■■■□ 3.98
SNHG12-212ENST00000531126 ERCC6Q03468 1493 aa39.78■■■■□ 3.96
SNHG12-212ENST00000531126 FANCD2Q9BXW9 1451 aa39.75■■■■□ 3.95
SNHG12-212ENST00000531126 CEP164Q9UPV0 1460 aa39.68■■■■□ 3.94
SNHG12-212ENST00000531126 KIF21AQ7Z4S6 1674 aa39.64■■■■□ 3.94
SNHG12-212ENST00000531126 MRC2Q9UBG0 1479 aa39.45■■■■□ 3.91
SNHG12-212ENST00000531126 ABCC8Q09428 1581 aa39.39■■■■□ 3.9
SNHG12-212ENST00000531126 THOC2Q8NI27 1593 aaKnown RBP39.33■■■■□ 3.89
SNHG12-212ENST00000531126 WDR62O43379 1518 aa39.27■■■■□ 3.88
SNHG12-212ENST00000531126 DNMBPQ6XZF7 1577 aa39.25■■■■□ 3.87
SNHG12-212ENST00000531126 WRNQ14191 1432 aaPredicted RBP eCLIP39.23■■■■□ 3.87
SNHG12-212ENST00000531126 URB2Q14146 1524 aaKnown RBP39.23■■■■□ 3.87
SNHG12-212ENST00000531126 TOPBP1Q92547 1522 aa39.18■■■■□ 3.86
SNHG12-212ENST00000531126 CUX1P39880 1505 aa39.12■■■■□ 3.85
SNHG12-212ENST00000531126 CUX2O14529 1486 aa39.11■■■■□ 3.85
SNHG12-212ENST00000531126 TOP2BQ02880 1626 aa39.06■■■■□ 3.84
SNHG12-212ENST00000531126 BIVM-ERCC5R4GMW8 1640 aa39.04■■■■□ 3.84
SNHG12-212ENST00000531126 SYNJ1O43426 1573 aa38.99■■■■□ 3.83
SNHG12-212ENST00000531126 FGD5Q6ZNL6 1462 aa38.91■■■■□ 3.82
SNHG12-212ENST00000531126 POLA1P09884 1462 aaPredicted RBP38.89■■■■□ 3.82
SNHG12-212ENST00000531126 TRIM41Q8WV44 630 aa38.85■■■■□ 3.81
SNHG12-212ENST00000531126 IFT140Q96RY7 1462 aa38.83■■■■□ 3.81
SNHG12-212ENST00000531126 SOGA1O94964 1423 aa38.79■■■■□ 3.8
SNHG12-212ENST00000531126 CHIC1Q5VXU3 224 aa38.74■■■■□ 3.79
SNHG12-212ENST00000531126 TARBP1Q13395 1621 aaKnown RBP38.67■■■■□ 3.78
SNHG12-212ENST00000531126 RAD54L2Q9Y4B4 1467 aa38.65■■■■□ 3.78
SNHG12-212ENST00000531126 ABCA10Q8WWZ4 1543 aa38.61■■■■□ 3.77
SNHG12-212ENST00000531126 WDR97A6NE52 1622 aa38.6■■■■□ 3.77
SNHG12-212ENST00000531126 KIF27Q86VH2 1401 aa38.42■■■■□ 3.74
SNHG12-212ENST00000531126 ZNF608Q9ULD9 1512 aaPredicted RBP38.42■■■■□ 3.74
SNHG12-212ENST00000531126 TDRD9Q8NDG6 1382 aaKnown RBP38.4■■■■□ 3.74
SNHG12-212ENST00000531126 EIF4G3O43432 1585 aaKnown RBP38.4■■■■□ 3.74
SNHG12-212ENST00000531126 GAPVD1Q14C86 1478 aa38.36■■■■□ 3.73
SNHG12-212ENST00000531126 ABCA5Q8WWZ7 1642 aa38.36■■■■□ 3.73
SNHG12-212ENST00000531126 AQRO60306 1485 aaKnown RBP eCLIP38.34■■■■□ 3.733e-10■■■■■ 36.3
SNHG12-212ENST00000531126 GRIN2BQ13224 1484 aa38.28■■■■□ 3.72
SNHG12-212ENST00000531126 EEA1Q15075 1411 aa38.26■■■■□ 3.72
SNHG12-212ENST00000531126 PBRM1Q86U86 1689 aa38.21■■■■□ 3.71
SNHG12-212ENST00000531126 ERICH3Q5RHP9 1530 aa38.21■■■■□ 3.71
SNHG12-212ENST00000531126 MAGI1Q96QZ7 1491 aaPredicted RBP38.12■■■■□ 3.69
SNHG12-212ENST00000531126 SNAPC4Q5SXM2 1469 aa38.05■■■■□ 3.68
SNHG12-212ENST00000531126 IGF1RP08069 1367 aa38.05■■■■□ 3.68
SNHG12-212ENST00000531126 RUSC2Q8N2Y8 1516 aa38.04■■■■□ 3.68
SNHG12-212ENST00000531126 CUL7Q14999 1698 aa38.04■■■■□ 3.68
SNHG12-212ENST00000531126 FHAD1B1AJZ9 1412 aa37.97■■■■□ 3.67
SNHG12-212ENST00000531126 CSRNP3Q8WYN3 585 aa37.96■■■■□ 3.67
SNHG12-212ENST00000531126 ADAMTS12P58397 1594 aa37.95■■■■□ 3.67
SNHG12-212ENST00000531126 SYNJ2O15056 1496 aa37.93■■■■□ 3.66
SNHG12-212ENST00000531126 FAM9AQ8IZU1 332 aaPredicted RBP37.9■■■■□ 3.66
SNHG12-212ENST00000531126 CARMIL1Q5VZK9 1371 aa37.9■■■■□ 3.66
SNHG12-212ENST00000531126 CHMP7Q8WUX9 453 aaPredicted RBP37.88■■■■□ 3.65
SNHG12-212ENST00000531126 FBLN2P98095 1184 aa37.81■■■■□ 3.64
SNHG12-212ENST00000531126 RAPGEF2Q9Y4G8 1499 aa37.78■■■■□ 3.64
SNHG12-212ENST00000531126 PRXQ9BXM0 1461 aa37.77■■■■□ 3.64
SNHG12-212ENST00000531126 GRIN2AQ12879 1464 aa37.75■■■■□ 3.63
SNHG12-212ENST00000531126 CHD1O14646 1710 aa37.75■■■■□ 3.63
SNHG12-212ENST00000531126 KIF21BO75037 1637 aa37.69■■■■□ 3.62
SNHG12-212ENST00000531126 OSCARQ8IYS5 282 aa37.61■■■■□ 3.61
SNHG12-212ENST00000531126 GOLGA3Q08378 1498 aa37.55■■■■□ 3.6
SNHG12-212ENST00000531126 NUP160Q12769 1436 aa37.54■■■■□ 3.6
SNHG12-212ENST00000531126 CEP170Q5SW79 1584 aa37.46■■■■□ 3.59
SNHG12-212ENST00000531126 KIAA0586Q9BVV6 1533 aa37.41■■■■□ 3.58
SNHG12-212ENST00000531126 UBTFP17480 764 aaKnown RBP37.38■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms