Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC073111.5-205ENST00000641717 521 ntBASIC21.95■■□□□ 1.1
PCDH15Q96QU1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
PCDH15Q96QU1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 AP005435.1-201ENST00000529293 1178 ntBASIC21.94■■□□□ 1.1
PCDH15Q96QU1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 AC020928.2-201ENST00000588717 2197 ntBASIC21.94■■□□□ 1.1
PCDH15Q96QU1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH15Q96QU1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.93■■□□□ 1.1
PCDH15Q96QU1 LINC02228-203ENST00000641970 1355 ntBASIC21.93■■□□□ 1.1
PCDH15Q96QU1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH15Q96QU1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH15Q96QU1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 CDCA4P2-201ENST00000441182 718 ntBASIC21.91■■□□□ 1.1
PCDH15Q96QU1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PCDH15Q96QU1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 AC137761.2-201ENST00000561729 223 ntBASIC21.9■■□□□ 1.1
PCDH15Q96QU1 AC145350.3-201ENST00000569033 163 ntBASIC21.9■■□□□ 1.1
PCDH15Q96QU1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH15Q96QU1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH15Q96QU1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDH15Q96QU1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH15Q96QU1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDH15Q96QU1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
PCDH15Q96QU1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH15Q96QU1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH15Q96QU1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 AC080038.1-201ENST00000611274 1154 ntBASIC21.88■■□□□ 1.09
PCDH15Q96QU1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH15Q96QU1 AC138932.3-201ENST00000567634 1902 ntBASIC21.88■■□□□ 1.09
PCDH15Q96QU1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms