Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A2P08123 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A2P08123 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
COL1A2P08123 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL1A2P08123 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A2P08123 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
COL1A2P08123 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A2P08123 AC097381.1-201ENST00000429019 1296 ntBASIC24.7■■□□□ 1.55
COL1A2P08123 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
COL1A2P08123 MIR5787-201ENST00000611784 55 ntBASIC24.7■■□□□ 1.55
COL1A2P08123 TSPY26P-201ENST00000476365 1326 ntBASIC24.7■■□□□ 1.54
COL1A2P08123 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
COL1A2P08123 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A2P08123 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A2P08123 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.69■■□□□ 1.54
COL1A2P08123 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.69■■□□□ 1.54
COL1A2P08123 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.69■■□□□ 1.54
COL1A2P08123 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
COL1A2P08123 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
COL1A2P08123 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.68■■□□□ 1.54
COL1A2P08123 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.68■■□□□ 1.54
COL1A2P08123 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.68■■□□□ 1.54
COL1A2P08123 AC010525.1-201ENST00000585559 441 ntBASIC24.68■■□□□ 1.54
COL1A2P08123 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A2P08123 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
COL1A2P08123 AC079630.1-202ENST00000618127 1840 ntBASIC24.68■■□□□ 1.54
COL1A2P08123 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A2P08123 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
COL1A2P08123 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
COL1A2P08123 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
COL1A2P08123 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.67■■□□□ 1.54
COL1A2P08123 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.67■■□□□ 1.54
COL1A2P08123 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A2P08123 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
COL1A2P08123 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A2P08123 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
COL1A2P08123 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
COL1A2P08123 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.67■■□□□ 1.54
COL1A2P08123 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
COL1A2P08123 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
COL1A2P08123 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
COL1A2P08123 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A2P08123 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A2P08123 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
COL1A2P08123 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A2P08123 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
COL1A2P08123 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A2P08123 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC24.66■■□□□ 1.54
COL1A2P08123 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A2P08123 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.66■■□□□ 1.54
COL1A2P08123 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A2P08123 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
COL1A2P08123 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.66■■□□□ 1.54
COL1A2P08123 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.66■■□□□ 1.54
COL1A2P08123 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.66■■□□□ 1.54
COL1A2P08123 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.65■■□□□ 1.54
COL1A2P08123 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.65■■□□□ 1.54
COL1A2P08123 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A2P08123 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.65■■□□□ 1.54
COL1A2P08123 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.65■■□□□ 1.54
COL1A2P08123 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.65■■□□□ 1.54
COL1A2P08123 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.65■■□□□ 1.54
COL1A2P08123 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A2P08123 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A2P08123 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.65■■□□□ 1.54
COL1A2P08123 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
COL1A2P08123 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
COL1A2P08123 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.53
COL1A2P08123 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL1A2P08123 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
COL1A2P08123 AP005435.1-201ENST00000529293 1178 ntBASIC24.64■■□□□ 1.53
COL1A2P08123 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.64■■□□□ 1.53
COL1A2P08123 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.64■■□□□ 1.53
COL1A2P08123 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL1A2P08123 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.53
COL1A2P08123 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
COL1A2P08123 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL1A2P08123 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL1A2P08123 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.63■■□□□ 1.53
COL1A2P08123 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.63■■□□□ 1.53
COL1A2P08123 MIR572-201ENST00000384983 95 ntBASIC24.63■■□□□ 1.53
COL1A2P08123 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.63■■□□□ 1.53
COL1A2P08123 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.63■■□□□ 1.53
COL1A2P08123 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
COL1A2P08123 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.62■■□□□ 1.53
COL1A2P08123 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
COL1A2P08123 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.62■■□□□ 1.53
COL1A2P08123 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.62■■□□□ 1.53
COL1A2P08123 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
COL1A2P08123 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL1A2P08123 ABCB10P4-201ENST00000566803 2184 ntBASIC24.61■■□□□ 1.53
COL1A2P08123 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
COL1A2P08123 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
COL1A2P08123 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms