Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SNRNP40Q96DI7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP40Q96DI7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNRNP40Q96DI7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNRNP40Q96DI7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.3■□□□□ 0.84
SNRNP40Q96DI7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRNP40Q96DI7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRNP40Q96DI7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 AC010525.1-201ENST00000585559 441 ntBASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRNP40Q96DI7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNRNP40Q96DI7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 AL499627.2-201ENST00000606283 725 ntBASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.26■□□□□ 0.83
SNRNP40Q96DI7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.25■□□□□ 0.83
SNRNP40Q96DI7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SNRNP40Q96DI7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 OR2I1P-207ENST00000453522 948 ntBASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
SNRNP40Q96DI7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 AC091060.1-201ENST00000623524 1766 ntBASIC20.22■□□□□ 0.83
SNRNP40Q96DI7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms