Protein–RNA interactions for Protein: O60831

PRAF2, PRA1 family protein 2, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2O60831 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PRAF2O60831 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PRAF2O60831 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PRAF2O60831 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 AC021231.2-201ENST00000594613 730 ntBASIC18.89■□□□□ 0.61
PRAF2O60831 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PRAF2O60831 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.89■□□□□ 0.61
PRAF2O60831 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.88■□□□□ 0.61
PRAF2O60831 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.88■□□□□ 0.61
PRAF2O60831 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRAF2O60831 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRAF2O60831 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.87■□□□□ 0.61
PRAF2O60831 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAF2O60831 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.87■□□□□ 0.61
PRAF2O60831 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.87■□□□□ 0.61
PRAF2O60831 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRAF2O60831 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.86■□□□□ 0.61
PRAF2O60831 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAF2O60831 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAF2O60831 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC18.86■□□□□ 0.61
PRAF2O60831 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PRAF2O60831 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRAF2O60831 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PRAF2O60831 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PRAF2O60831 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
PRAF2O60831 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.85■□□□□ 0.61
PRAF2O60831 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.85■□□□□ 0.61
PRAF2O60831 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PRAF2O60831 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PRAF2O60831 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PRAF2O60831 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PRAF2O60831 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.84■□□□□ 0.61
PRAF2O60831 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRAF2O60831 AC079630.1-202ENST00000618127 1840 ntBASIC18.84■□□□□ 0.61
PRAF2O60831 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAF2O60831 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PRAF2O60831 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAF2O60831 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAF2O60831 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRAF2O60831 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRAF2O60831 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAF2O60831 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.83■□□□□ 0.6
PRAF2O60831 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAF2O60831 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRAF2O60831 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms