RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 NISCHQ9Y2I1 1504 aa47.44■■■■■ 5.18
SLC9A3R1-201ENST00000262613 CCDC180Q9P1Z9 1646 aa41.49■■■■■ 4.23
SLC9A3R1-201ENST00000262613 ZCCHC6Q5VYS8 1495 aaKnown RBP39.83■■■■□ 3.97
SLC9A3R1-201ENST00000262613 ABCC9O60706 1549 aa39.33■■■■□ 3.89
SLC9A3R1-201ENST00000262613 DCAF1Q9Y4B6 1507 aa39.26■■■■□ 3.87
SLC9A3R1-201ENST00000262613 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
SLC9A3R1-201ENST00000262613 MYO15BQ96JP2 1530 aa38.87■■■■□ 3.81
SLC9A3R1-201ENST00000262613 NACADO15069 1562 aa38.66■■■■□ 3.78
SLC9A3R1-201ENST00000262613 SHROOM4Q9ULL8 1493 aa38.48■■■■□ 3.75
SLC9A3R1-201ENST00000262613 RB1CC1Q8TDY2 1594 aa38.37■■■■□ 3.73
SLC9A3R1-201ENST00000262613 SCRIBQ14160 1630 aa38.09■■■■□ 3.69
SLC9A3R1-201ENST00000262613 UNC13AQ9UPW8 1703 aa37.64■■■■□ 3.62
SLC9A3R1-201ENST00000262613 BICRAQ9NZM4 1560 aa37.25■■■■□ 3.55
SLC9A3R1-201ENST00000262613 PABPN1Q86U42 306 aaKnown RBP eCLIP37.02■■■■□ 3.52
SLC9A3R1-201ENST00000262613 SUPT5HO00267 1087 aaKnown RBP36.9■■■■□ 3.5
SLC9A3R1-201ENST00000262613 CECR2Q9BXF3 1484 aa36.86■■■■□ 3.49
SLC9A3R1-201ENST00000262613 RSF1Q96T23 1441 aaPredicted RBP36.71■■■■□ 3.47
SLC9A3R1-201ENST00000262613 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
SLC9A3R1-201ENST00000262613 BAZ1AQ9NRL2 1556 aaPredicted RBP36.65■■■■□ 3.46
SLC9A3R1-201ENST00000262613 SMARCA4P51532 1647 aa36.53■■■■□ 3.44
SLC9A3R1-201ENST00000262613 WIZO95785 1651 aa36.34■■■■□ 3.41
SLC9A3R1-201ENST00000262613 EIF4G1Q04637 1599 aaKnown RBP36.12■■■■□ 3.37
SLC9A3R1-201ENST00000262613 PEG3Q9GZU2 1588 aa36.11■■■■□ 3.37
SLC9A3R1-201ENST00000262613 TOP2AP11388 1531 aaKnown RBP35.97■■■■□ 3.35
SLC9A3R1-201ENST00000262613 ATAD2BQ9ULI0 1458 aa35.95■■■■□ 3.35
SLC9A3R1-201ENST00000262613 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
SLC9A3R1-201ENST00000262613 BAZ1BQ9UIG0 1483 aaKnown RBP35.72■■■■□ 3.31
SLC9A3R1-201ENST00000262613 NCAPD3P42695 1498 aa35.68■■■■□ 3.3
SLC9A3R1-201ENST00000262613 HMGXB3Q12766 1538 aa35.63■■■■□ 3.29
SLC9A3R1-201ENST00000262613 CC2D2AQ9P2K1 1620 aa35.63■■■■□ 3.29
SLC9A3R1-201ENST00000262613 CCDC88BA6NC98 1476 aa35.57■■■■□ 3.28
SLC9A3R1-201ENST00000262613 CHIC1Q5VXU3 224 aa35.27■■■■□ 3.24
SLC9A3R1-201ENST00000262613 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
SLC9A3R1-201ENST00000262613 CFTRP13569 1480 aa34.83■■■■□ 3.17
SLC9A3R1-201ENST00000262613 ABCC8Q09428 1581 aa34.76■■■■□ 3.16
SLC9A3R1-201ENST00000262613 CADPSQ9ULU8 1353 aa34.73■■■■□ 3.15
SLC9A3R1-201ENST00000262613 TRIM41Q8WV44 630 aa34.73■■■■□ 3.15
SLC9A3R1-201ENST00000262613 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
SLC9A3R1-201ENST00000262613 WRNQ14191 1432 aaPredicted RBP eCLIP34.55■■■■□ 3.12
SLC9A3R1-201ENST00000262613 LAMC3Q9Y6N6 1575 aa34.5■■■■□ 3.11
SLC9A3R1-201ENST00000262613 NESP48681 1621 aa34.49■■■■□ 3.11
SLC9A3R1-201ENST00000262613 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
SLC9A3R1-201ENST00000262613 FANCD2Q9BXW9 1451 aa34.35■■■■□ 3.09
SLC9A3R1-201ENST00000262613 TOP2BQ02880 1626 aa34.33■■■■□ 3.09
SLC9A3R1-201ENST00000262613 BIVM-ERCC5R4GMW8 1640 aa34.32■■■■□ 3.08
SLC9A3R1-201ENST00000262613 CUX1P39880 1505 aa34.28■■■■□ 3.08
SLC9A3R1-201ENST00000262613 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
SLC9A3R1-201ENST00000262613 CEP164Q9UPV0 1460 aa34.16■■■■□ 3.06
SLC9A3R1-201ENST00000262613 KIF21AQ7Z4S6 1674 aa34.11■■■■□ 3.05
SLC9A3R1-201ENST00000262613 FAM9AQ8IZU1 332 aaPredicted RBP34.06■■■■□ 3.04
SLC9A3R1-201ENST00000262613 SOGA1O94964 1423 aa34.06■■■■□ 3.04
SLC9A3R1-201ENST00000262613 DNMBPQ6XZF7 1577 aa34.04■■■■□ 3.04
SLC9A3R1-201ENST00000262613 TOPBP1Q92547 1522 aa33.97■■■■□ 3.03
SLC9A3R1-201ENST00000262613 HRCP23327 699 aa33.96■■■■□ 3.03
SLC9A3R1-201ENST00000262613 EEA1Q15075 1411 aa33.96■■■■□ 3.03
SLC9A3R1-201ENST00000262613 URB2Q14146 1524 aaKnown RBP33.96■■■■□ 3.03
SLC9A3R1-201ENST00000262613 RUSC2Q8N2Y8 1516 aa33.94■■■■□ 3.02
SLC9A3R1-201ENST00000262613 FGD5Q6ZNL6 1462 aa33.92■■■■□ 3.02
SLC9A3R1-201ENST00000262613 LOC105371045A0A1W2PR82 267 aa33.89■■■■□ 3.02
SLC9A3R1-201ENST00000262613 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
SLC9A3R1-201ENST00000262613 POLA1P09884 1462 aaPredicted RBP33.79■■■■□ 3
SLC9A3R1-201ENST00000262613 CSRNP3Q8WYN3 585 aa33.75■■■□□ 2.99
SLC9A3R1-201ENST00000262613 ERCC6Q03468 1493 aa33.73■■■□□ 2.99
SLC9A3R1-201ENST00000262613 KIF27Q86VH2 1401 aa33.69■■■□□ 2.98
SLC9A3R1-201ENST00000262613 RAD54L2Q9Y4B4 1467 aa33.67■■■□□ 2.98
SLC9A3R1-201ENST00000262613 WDR62O43379 1518 aa33.66■■■□□ 2.98
SLC9A3R1-201ENST00000262613 CUX2O14529 1486 aa33.65■■■□□ 2.98
SLC9A3R1-201ENST00000262613 ABCA10Q8WWZ4 1543 aa33.63■■■□□ 2.97
SLC9A3R1-201ENST00000262613 THOC2Q8NI27 1593 aaKnown RBP33.61■■■□□ 2.97
SLC9A3R1-201ENST00000262613 WDR97A6NE52 1622 aa33.58■■■□□ 2.97
SLC9A3R1-201ENST00000262613 EHMT2Q96KQ7 1210 aa33.56■■■□□ 2.96
SLC9A3R1-201ENST00000262613 KIF21BO75037 1637 aa33.56■■■□□ 2.96
SLC9A3R1-201ENST00000262613 TARBP1Q13395 1621 aaKnown RBP33.51■■■□□ 2.95
SLC9A3R1-201ENST00000262613 PCGF6Q9BYE7 350 aa33.51■■■□□ 2.95
SLC9A3R1-201ENST00000262613 GOLGA3Q08378 1498 aa33.48■■■□□ 2.95
SLC9A3R1-201ENST00000262613 PRXQ9BXM0 1461 aa33.44■■■□□ 2.94
SLC9A3R1-201ENST00000262613 IGF1RP08069 1367 aa33.41■■■□□ 2.94
SLC9A3R1-201ENST00000262613 ABCA5Q8WWZ7 1642 aa33.4■■■□□ 2.94
SLC9A3R1-201ENST00000262613 RAPGEF2Q9Y4G8 1499 aa33.38■■■□□ 2.93
SLC9A3R1-201ENST00000262613 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
SLC9A3R1-201ENST00000262613 IFT140Q96RY7 1462 aa33.35■■■□□ 2.93
SLC9A3R1-201ENST00000262613 TNIKQ9UKE5 1360 aa33.33■■■□□ 2.93
SLC9A3R1-201ENST00000262613 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
SLC9A3R1-201ENST00000262613 GAPVD1Q14C86 1478 aa33.29■■■□□ 2.92
SLC9A3R1-201ENST00000262613 UBTFP17480 764 aaKnown RBP33.27■■■□□ 2.92
SLC9A3R1-201ENST00000262613 CARMIL1Q5VZK9 1371 aa33.24■■■□□ 2.91
SLC9A3R1-201ENST00000262613 CUL7Q14999 1698 aa33.21■■■□□ 2.91
SLC9A3R1-201ENST00000262613 ZNF608Q9ULD9 1512 aaPredicted RBP33.18■■■□□ 2.9
SLC9A3R1-201ENST00000262613 PBRM1Q86U86 1689 aa33.16■■■□□ 2.9
SLC9A3R1-201ENST00000262613 AQRO60306 1485 aaKnown RBP eCLIP33.16■■■□□ 2.94e-8■■■■■ 30.2
SLC9A3R1-201ENST00000262613 CEP162Q5TB80 1403 aa33.14■■■□□ 2.9
SLC9A3R1-201ENST00000262613 EIF4G3O43432 1585 aaKnown RBP33.09■■■□□ 2.89
SLC9A3R1-201ENST00000262613 GRIN2BQ13224 1484 aa33.07■■■□□ 2.88
SLC9A3R1-201ENST00000262613 PPARGC1BQ86YN6 1023 aaKnown RBP32.99■■■□□ 2.87
SLC9A3R1-201ENST00000262613 ADAMTS12P58397 1594 aa32.98■■■□□ 2.87
SLC9A3R1-201ENST00000262613 TRIM26Q12899 539 aaPredicted RBP32.96■■■□□ 2.87
SLC9A3R1-201ENST00000262613 FHAD1B1AJZ9 1412 aa32.94■■■□□ 2.86
SLC9A3R1-201ENST00000262613 CLIP1P30622 1438 aa32.92■■■□□ 2.86
SLC9A3R1-201ENST00000262613 SNAPC4Q5SXM2 1469 aa32.88■■■□□ 2.85
SLC9A3R1-201ENST00000262613 CTTNBP2Q8WZ74 1663 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms