RNA–Protein interactions for RNA: ENST00000375980.8

EFHD2-201, Transcript of EF-hand domain family member D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFHD2, Length 2,419 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHD2-201ENST00000375980 NISCHQ9Y2I1 1504 aa38.86■■■■□ 3.81
EFHD2-201ENST00000375980 HRCP23327 699 aa34.35■■■■□ 3.09
EFHD2-201ENST00000375980 SHROOM4Q9ULL8 1493 aa34.17■■■■□ 3.06
EFHD2-201ENST00000375980 SUPT5HO00267 1087 aaKnown RBP34■■■■□ 3.03
EFHD2-201ENST00000375980 PPARGC1BQ86YN6 1023 aaKnown RBP33.72■■■□□ 2.99
EFHD2-201ENST00000375980 PCGF6Q9BYE7 350 aa33.7■■■□□ 2.99
EFHD2-201ENST00000375980 MYO15BQ96JP2 1530 aa33.7■■■□□ 2.99
EFHD2-201ENST00000375980 CHIC1Q5VXU3 224 aa33.44■■■□□ 2.94
EFHD2-201ENST00000375980 ZCCHC6Q5VYS8 1495 aaKnown RBP32.95■■■□□ 2.87
EFHD2-201ENST00000375980 PELP1Q8IZL8 1130 aaKnown RBP32.9■■■□□ 2.86
EFHD2-201ENST00000375980 DCAF1Q9Y4B6 1507 aa32.87■■■□□ 2.85
EFHD2-201ENST00000375980 LOC105371045A0A1W2PR82 267 aa32.69■■■□□ 2.82
EFHD2-201ENST00000375980 CCDC180Q9P1Z9 1646 aa32.61■■■□□ 2.81
EFHD2-201ENST00000375980 TRIM26Q12899 539 aaPredicted RBP32.58■■■□□ 2.81
EFHD2-201ENST00000375980 SCAF1Q9H7N4 1312 aaKnown RBP32.5■■■□□ 2.79
EFHD2-201ENST00000375980 DCAF8L2P0C7V8 631 aa32.28■■■□□ 2.76
EFHD2-201ENST00000375980 ZEB1P37275 1124 aaPredicted RBP32.24■■■□□ 2.75
EFHD2-201ENST00000375980 ACIN1Q9UKV3 1341 aaKnown RBP31.68■■■□□ 2.66
EFHD2-201ENST00000375980 NEUROD1Q13562 356 aa31.63■■■□□ 2.65
EFHD2-201ENST00000375980 MYT1Q01538 1121 aa31.54■■■□□ 2.64
EFHD2-201ENST00000375980 FAM9AQ8IZU1 332 aaPredicted RBP31.45■■■□□ 2.63
EFHD2-201ENST00000375980 GTF3C3Q9Y5Q9 886 aa31.43■■■□□ 2.62
EFHD2-201ENST00000375980 TRIM41Q8WV44 630 aa31.4■■■□□ 2.62
EFHD2-201ENST00000375980 EHMT2Q96KQ7 1210 aa31.35■■■□□ 2.61
EFHD2-201ENST00000375980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.27■■■□□ 2.6
EFHD2-201ENST00000375980 CENPBP07199 599 aaPredicted RBP31.22■■■□□ 2.59
EFHD2-201ENST00000375980 ABCC9O60706 1549 aa31.17■■■□□ 2.58
EFHD2-201ENST00000375980 DIEXFQ68CQ4 756 aaKnown RBP31.17■■■□□ 2.58
EFHD2-201ENST00000375980 CCER1Q8TC90 406 aaPredicted RBP31.16■■■□□ 2.58
EFHD2-201ENST00000375980 RSF1Q96T23 1441 aaPredicted RBP31.04■■■□□ 2.56
EFHD2-201ENST00000375980 RB1CC1Q8TDY2 1594 aa30.93■■■□□ 2.54
EFHD2-201ENST00000375980 SCRIBQ14160 1630 aa30.88■■■□□ 2.53
EFHD2-201ENST00000375980 YTHDC1Q96MU7 727 aaKnown RBP30.7■■■□□ 2.51
EFHD2-201ENST00000375980 TTBK1Q5TCY1 1321 aaPredicted RBP30.61■■■□□ 2.49
EFHD2-201ENST00000375980 ZNF316A6NFI3 1004 aaPredicted RBP30.57■■■□□ 2.48
EFHD2-201ENST00000375980 CECR2Q9BXF3 1484 aa30.42■■■□□ 2.46
EFHD2-201ENST00000375980 MIER1Q8N108 512 aa30.42■■■□□ 2.46
EFHD2-201ENST00000375980 MROH2BQ7Z745 1585 aa30.33■■■□□ 2.45
EFHD2-201ENST00000375980 WRNQ14191 1432 aaPredicted RBP eCLIP30.29■■■□□ 2.441e-6■■■■■ 58.5
EFHD2-201ENST00000375980 NACADO15069 1562 aa30.28■■■□□ 2.44
EFHD2-201ENST00000375980 WIZO95785 1651 aa30.18■■■□□ 2.42
EFHD2-201ENST00000375980 CEP162Q5TB80 1403 aa30.16■■■□□ 2.42
EFHD2-201ENST00000375980 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
EFHD2-201ENST00000375980 SUPT16HQ9Y5B9 1047 aaKnown RBP29.94■■■□□ 2.38
EFHD2-201ENST00000375980 CCDC88BA6NC98 1476 aa29.94■■■□□ 2.38
EFHD2-201ENST00000375980 TNIKQ9UKE5 1360 aa29.92■■■□□ 2.38
EFHD2-201ENST00000375980 HNRNPUL2Q1KMD3 747 aaKnown RBP29.92■■■□□ 2.38
EFHD2-201ENST00000375980 BAZ1AQ9NRL2 1556 aaPredicted RBP29.91■■■□□ 2.38
EFHD2-201ENST00000375980 ABCC8Q09428 1581 aa29.88■■■□□ 2.37
EFHD2-201ENST00000375980 SOGA1O94964 1423 aa29.85■■■□□ 2.37
EFHD2-201ENST00000375980 UBTFP17480 764 aaKnown RBP29.81■■■□□ 2.36
EFHD2-201ENST00000375980 TSHZ2Q9NRE2 1034 aa29.8■■■□□ 2.36
EFHD2-201ENST00000375980 ANP32EQ9BTT0 268 aa29.79■■■□□ 2.36
EFHD2-201ENST00000375980 CLSPNQ9HAW4 1339 aa29.75■■■□□ 2.35
EFHD2-201ENST00000375980 BCL11AQ9H165 835 aa29.7■■■□□ 2.35
EFHD2-201ENST00000375980 CSRNP3Q8WYN3 585 aa29.69■■■□□ 2.34
EFHD2-201ENST00000375980 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
EFHD2-201ENST00000375980 UNC13AQ9UPW8 1703 aa29.62■■■□□ 2.33
EFHD2-201ENST00000375980 TOP2AP11388 1531 aaKnown RBP29.59■■■□□ 2.33
EFHD2-201ENST00000375980 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
EFHD2-201ENST00000375980 EEA1Q15075 1411 aa29.54■■■□□ 2.32
EFHD2-201ENST00000375980 SMARCA2P51531 1590 aa29.51■■■□□ 2.32
EFHD2-201ENST00000375980 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
EFHD2-201ENST00000375980 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
EFHD2-201ENST00000375980 CLIP1P30622 1438 aa29.34■■■□□ 2.29
EFHD2-201ENST00000375980 BCANQ96GW7 911 aa29.34■■■□□ 2.29
EFHD2-201ENST00000375980 DHX57Q6P158 1386 aaKnown RBP29.33■■■□□ 2.29
EFHD2-201ENST00000375980 VPS8Q8N3P4 1428 aa29.3■■■□□ 2.28
EFHD2-201ENST00000375980 APLP2Q06481 763 aa29.29■■■□□ 2.28
EFHD2-201ENST00000375980 BICRAQ9NZM4 1560 aa29.29■■■□□ 2.28
EFHD2-201ENST00000375980 KCNH8Q96L42 1107 aa29.29■■■□□ 2.28
EFHD2-201ENST00000375980 CEP164Q9UPV0 1460 aa29.23■■■□□ 2.27
EFHD2-201ENST00000375980 RANGAP1P46060 587 aaPredicted RBP29.18■■■□□ 2.26
EFHD2-201ENST00000375980 FKBP8Q14318 412 aa29.15■■■□□ 2.26
EFHD2-201ENST00000375980 KIF21BO75037 1637 aa29.12■■■□□ 2.25
EFHD2-201ENST00000375980 RBM19Q9Y4C8 960 aaKnown RBP29.09■■■□□ 2.25
EFHD2-201ENST00000375980 RAPGEF2Q9Y4G8 1499 aa29.01■■■□□ 2.23
EFHD2-201ENST00000375980 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
EFHD2-201ENST00000375980 BAZ1BQ9UIG0 1483 aaKnown RBP28.96■■■□□ 2.23
EFHD2-201ENST00000375980 ITGAEP38570 1179 aa28.91■■■□□ 2.22
EFHD2-201ENST00000375980 KANK4Q5T7N3 995 aaPredicted RBP28.91■■■□□ 2.22
EFHD2-201ENST00000375980 MSH5O43196 834 aa28.86■■■□□ 2.21
EFHD2-201ENST00000375980 NEFLP07196 543 aa28.84■■■□□ 2.21
EFHD2-201ENST00000375980 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
EFHD2-201ENST00000375980 PEG3Q9GZU2 1588 aa28.81■■■□□ 2.2
EFHD2-201ENST00000375980 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
EFHD2-201ENST00000375980 TRIM52Q96A61 297 aa28.74■■■□□ 2.19
EFHD2-201ENST00000375980 CUX2O14529 1486 aa28.74■■■□□ 2.19
EFHD2-201ENST00000375980 ARAP1Q96P48 1450 aa28.73■■■□□ 2.19
EFHD2-201ENST00000375980 MAPKBP1O60336 1514 aa28.66■■■□□ 2.18
EFHD2-201ENST00000375980 CCNB3Q8WWL7 1395 aa28.65■■■□□ 2.18
EFHD2-201ENST00000375980 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
EFHD2-201ENST00000375980 ATAD2BQ9ULI0 1458 aa28.62■■■□□ 2.17
EFHD2-201ENST00000375980 RAB3GAP2Q9H2M9 1393 aa28.61■■■□□ 2.17
EFHD2-201ENST00000375980 WDR97A6NE52 1622 aa28.58■■■□□ 2.17
EFHD2-201ENST00000375980 HIRIP3Q9BW71 556 aaPredicted RBP28.57■■■□□ 2.16
EFHD2-201ENST00000375980 FANCIQ9NVI1 1328 aa28.54■■■□□ 2.16
EFHD2-201ENST00000375980 SIN3AQ96ST3 1273 aa28.54■■■□□ 2.16
EFHD2-201ENST00000375980 CCER2I3L3R5 266 aa28.52■■■□□ 2.16
EFHD2-201ENST00000375980 ERICH6Q7L0X2 663 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms