Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AL499627.2-201ENST00000606283 725 ntBASIC21.57■■□□□ 1.04
DUX1O43812 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.57■■□□□ 1.04
DUX1O43812 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
DUX1O43812 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
DUX1O43812 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
DUX1O43812 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.56■■□□□ 1.04
DUX1O43812 AC144652.1-201ENST00000609974 1624 ntBASIC21.56■■□□□ 1.04
DUX1O43812 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DUX1O43812 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DUX1O43812 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
DUX1O43812 AC104564.3-201ENST00000582367 638 ntBASIC21.56■■□□□ 1.04
DUX1O43812 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DUX1O43812 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
DUX1O43812 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
DUX1O43812 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.56■■□□□ 1.04
DUX1O43812 LINC00543-201ENST00000567234 1845 ntBASIC21.55■■□□□ 1.04
DUX1O43812 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUX1O43812 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUX1O43812 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
DUX1O43812 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.55■■□□□ 1.04
DUX1O43812 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.55■■□□□ 1.04
DUX1O43812 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUX1O43812 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DUX1O43812 LINC01124-201ENST00000409786 2117 ntBASIC21.55■■□□□ 1.04
DUX1O43812 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.54■■□□□ 1.04
DUX1O43812 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.54■■□□□ 1.04
DUX1O43812 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.54■■□□□ 1.04
DUX1O43812 MIR6821-201ENST00000617625 74 ntBASIC21.54■■□□□ 1.04
DUX1O43812 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUX1O43812 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DUX1O43812 LINC01529-204ENST00000636474 1715 ntBASIC21.54■■□□□ 1.04
DUX1O43812 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.54■■□□□ 1.04
DUX1O43812 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DUX1O43812 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.53■■□□□ 1.04
DUX1O43812 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DUX1O43812 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.53■■□□□ 1.04
DUX1O43812 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.53■■□□□ 1.04
DUX1O43812 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DUX1O43812 AC097381.1-201ENST00000429019 1296 ntBASIC21.53■■□□□ 1.04
DUX1O43812 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.53■■□□□ 1.04
DUX1O43812 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.53■■□□□ 1.04
DUX1O43812 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.53■■□□□ 1.04
DUX1O43812 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
DUX1O43812 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.53■■□□□ 1.04
DUX1O43812 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.53■■□□□ 1.04
DUX1O43812 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DUX1O43812 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.53■■□□□ 1.04
DUX1O43812 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DUX1O43812 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DUX1O43812 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DUX1O43812 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DUX1O43812 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.52■■□□□ 1.04
DUX1O43812 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.52■■□□□ 1.04
DUX1O43812 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.52■■□□□ 1.04
DUX1O43812 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
DUX1O43812 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
DUX1O43812 TSPY26P-201ENST00000476365 1326 ntBASIC21.52■■□□□ 1.03
DUX1O43812 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.52■■□□□ 1.03
DUX1O43812 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
DUX1O43812 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
DUX1O43812 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.51■■□□□ 1.03
DUX1O43812 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.51■■□□□ 1.03
DUX1O43812 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
DUX1O43812 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DUX1O43812 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.5■■□□□ 1.03
DUX1O43812 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
DUX1O43812 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DUX1O43812 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DUX1O43812 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
DUX1O43812 OR2I1P-207ENST00000453522 948 ntBASIC21.5■■□□□ 1.03
DUX1O43812 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
DUX1O43812 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.5■■□□□ 1.03
DUX1O43812 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.5■■□□□ 1.03
DUX1O43812 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DUX1O43812 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
DUX1O43812 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.49■■□□□ 1.03
DUX1O43812 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DUX1O43812 IGHV3-19-201ENST00000521488 291 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms