Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 PSME3-211ENST00000591152 1018 ntTSL 321.8■■□□□ 1.088e-8■□□□□ 9.1
EIF3DO15371 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.918e-8■□□□□ 9.1
EIF3DO15371 PSME3-206ENST00000585805 1364 ntTSL 1 (best)20.56■□□□□ 0.888e-8■□□□□ 9.1
EIF3DO15371 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.98■□□□□ 0.798e-8■□□□□ 9.1
EIF3DO15371 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.738e-8■□□□□ 9.1
EIF3DO15371 PSME3-212ENST00000591722 537 ntTSL 219.19■□□□□ 0.668e-8■□□□□ 9.1
EIF3DO15371 NDUFC1-204ENST00000503453 682 ntTSL 319.14■□□□□ 0.651e-9■□□□□ 9.1
EIF3DO15371 NAA50-204ENST00000478020 473 ntTSL 418.53■□□□□ 0.561e-9■□□□□ 9.1
EIF3DO15371 RNF167-212ENST00000575400 858 ntTSL 318.47■□□□□ 0.558e-8■□□□□ 9.1
EIF3DO15371 NAA50-202ENST00000467022 520 ntTSL 418.34■□□□□ 0.531e-9■□□□□ 9.1
EIF3DO15371 NAA50-205ENST00000481432 958 ntTSL 318.34■□□□□ 0.531e-9■□□□□ 9.1
EIF3DO15371 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.461e-9■□□□□ 9.1
EIF3DO15371 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.81■□□□□ 0.448e-8■□□□□ 9.1
EIF3DO15371 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.398e-8■□□□□ 9.1
EIF3DO15371 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.388e-8■□□□□ 9.1
EIF3DO15371 RREB1-205ENST00000467782 243 ntTSL 517.33■□□□□ 0.368e-8■□□□□ 9.1
EIF3DO15371 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.271e-9■□□□□ 9.1
EIF3DO15371 NDUFC1-207ENST00000507764 838 ntTSL 216.74■□□□□ 0.271e-9■□□□□ 9.1
EIF3DO15371 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.261e-9■□□□□ 9.1
EIF3DO15371 NDUFC1-202ENST00000394225 664 ntTSL 216.66■□□□□ 0.261e-9■□□□□ 9.1
EIF3DO15371 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.36■□□□□ 0.211e-9■□□□□ 9.1
EIF3DO15371 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.21e-9■□□□□ 9.1
EIF3DO15371 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.188e-8■□□□□ 9.1
EIF3DO15371 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.148e-8■□□□□ 9.1
EIF3DO15371 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.071e-9■□□□□ 9.1
EIF3DO15371 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.071e-9■□□□□ 9.1
EIF3DO15371 RNF167-203ENST00000570492 766 ntTSL 315.35■□□□□ 0.058e-8■□□□□ 9.1
EIF3DO15371 PSME3-215ENST00000592578 549 ntTSL 415.33■□□□□ 0.048e-8■□□□□ 9.1
EIF3DO15371 PSME3-208ENST00000586312 752 ntTSL 514.94□□□□□ -0.028e-8■□□□□ 9.1
EIF3DO15371 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.94□□□□□ -0.028e-8■□□□□ 9.1
EIF3DO15371 RNF167-204ENST00000571365 535 ntTSL 214.91□□□□□ -0.028e-8■□□□□ 9.1
EIF3DO15371 RNF167-215ENST00000576452 589 ntTSL 514.8□□□□□ -0.048e-8■□□□□ 9.1
EIF3DO15371 NDUFC1-208ENST00000513022 564 ntTSL 414.42□□□□□ -0.11e-9■□□□□ 9.1
EIF3DO15371 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.33□□□□□ -0.128e-8■□□□□ 9.1
EIF3DO15371 RREB1-206ENST00000471433 1021 ntTSL 514.09□□□□□ -0.158e-8■□□□□ 9.1
EIF3DO15371 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC13.87□□□□□ -0.198e-8■□□□□ 9.1
EIF3DO15371 RREB1-209ENST00000491191 998 ntTSL 513.73□□□□□ -0.218e-8■□□□□ 9.1
EIF3DO15371 RNF167-207ENST00000572430 1511 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.268e-8■□□□□ 9.1
EIF3DO15371 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.281e-9■□□□□ 9.1
EIF3DO15371 APOC1-206ENST00000590334 508 ntTSL 513.28□□□□□ -0.288e-8■□□□□ 9.1
EIF3DO15371 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC13.17□□□□□ -0.31e-9■□□□□ 9.1
EIF3DO15371 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC13.07□□□□□ -0.321e-9■□□□□ 9.1
EIF3DO15371 PSME3-213ENST00000592169 826 ntTSL 3 BASIC12.52□□□□□ -0.418e-8■□□□□ 9.1
EIF3DO15371 RNF167-209ENST00000573404 552 ntTSL 412.44□□□□□ -0.428e-8■□□□□ 9.1
EIF3DO15371 RNF167-202ENST00000570328 298 ntTSL 312.38□□□□□ -0.438e-8■□□□□ 9.1
EIF3DO15371 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC11.78□□□□□ -0.528e-8■□□□□ 9.1
EIF3DO15371 NDUFC1-205ENST00000503997 628 ntTSL 311.41□□□□□ -0.581e-9■□□□□ 9.1
EIF3DO15371 SNRPD1-203ENST00000579618 320 ntTSL 5 BASIC11.24□□□□□ -0.611e-9■□□□□ 9.1
EIF3DO15371 APOC1-201ENST00000586638 425 ntTSL 3 BASIC11.21□□□□□ -0.618e-8■□□□□ 9.1
EIF3DO15371 NAA50-210ENST00000616174 3257 ntTSL 2 BASIC11.2□□□□□ -0.621e-9■□□□□ 9.1
EIF3DO15371 PSME3-201ENST00000293362 3144 ntTSL 1 (best) BASIC11.09□□□□□ -0.638e-8■□□□□ 9.1
EIF3DO15371 APOC1-204ENST00000589078 213 ntTSL 210.54□□□□□ -0.728e-8■□□□□ 9.1
EIF3DO15371 CHD4-207ENST00000537634 691 ntTSL 210.38□□□□□ -0.758e-8■□□□□ 9.1
EIF3DO15371 CHD4-212ENST00000545083 511 ntTSL 39.81□□□□□ -0.848e-8■□□□□ 9.1
EIF3DO15371 APOC1-207ENST00000592176 514 ntTSL 59.68□□□□□ -0.868e-8■□□□□ 9.1
EIF3DO15371 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.961e-9■□□□□ 9.1
EIF3DO15371 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.423e-6■□□□□ 9
EIF3DO15371 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.66■■□□□ 1.383e-6■□□□□ 9
EIF3DO15371 PTP4A3-205ENST00000523147 558 ntTSL 522.62■■□□□ 1.213e-6■□□□□ 9
EIF3DO15371 MCF2L-214ENST00000423251 734 ntTSL 320.49■□□□□ 0.873e-6■□□□□ 9
EIF3DO15371 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.12■□□□□ 0.493e-6■□□□□ 9
EIF3DO15371 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.453e-6■□□□□ 9
EIF3DO15371 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.33e-6■□□□□ 9
EIF3DO15371 MCF2L-210ENST00000409954 574 ntTSL 515.6■□□□□ 0.093e-6■□□□□ 9
EIF3DO15371 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC14.37□□□□□ -0.113e-6■□□□□ 9
EIF3DO15371 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.293e-6■□□□□ 9
EIF3DO15371 DAZAP1-207ENST00000589484 3414 ntTSL 213.22□□□□□ -0.293e-6■□□□□ 9
EIF3DO15371 CHD7-207ENST00000527921 527 ntTSL 412.87□□□□□ -0.353e-6■□□□□ 9
EIF3DO15371 MCF2L-202ENST00000375597 3413 ntTSL 1 (best) BASIC12.48□□□□□ -0.413e-6■□□□□ 9
EIF3DO15371 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.543e-6■□□□□ 9
EIF3DO15371 RBM19-204ENST00000546876 604 ntTSL 311.44□□□□□ -0.583e-6■□□□□ 9
EIF3DO15371 DAZAP1-206ENST00000587833 560 ntTSL 511.43□□□□□ -0.583e-6■□□□□ 9
EIF3DO15371 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.713e-6■□□□□ 9
EIF3DO15371 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC9.08□□□□□ -0.963e-6■□□□□ 9
EIF3DO15371 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.973e-6■□□□□ 9
EIF3DO15371 NCOR1-223ENST00000583226 614 ntTSL 57.83□□□□□ -1.168e-10■□□□□ 9
EIF3DO15371 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.43□□□□□ -1.228e-10■□□□□ 9
EIF3DO15371 WDFY3-203ENST00000426414 3428 ntTSL 27.34□□□□□ -1.233e-6■□□□□ 9
EIF3DO15371 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.16□□□□□ -1.268e-10■□□□□ 9
EIF3DO15371 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.288e-10■□□□□ 9
EIF3DO15371 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.87□□□□□ -1.318e-10■□□□□ 9
EIF3DO15371 RN7SL2-201ENST00000490232 300 ntBASIC13.84□□□□□ -0.193e-34■□□□□ 9
EIF3DO15371 AL627171.2-202ENST00000634923 923 ntTSL 5 BASIC10.63□□□□□ -0.713e-34■□□□□ 9
EIF3DO15371 AL627171.2-201ENST00000635177 1090 ntTSL 5 BASIC9.59□□□□□ -0.873e-34■□□□□ 9
EIF3DO15371 MT-TI-201ENST00000387365 69 ntBASIC0.75□□□□□ -2.296e-84■□□□□ 9
EIF3DO15371 FANCA-232ENST00000568983 726 ntTSL 212.79□□□□□ -0.365e-7■□□□□ 9
EIF3DO15371 PTP4A1-202ENST00000470661 479 ntTSL 27.1□□□□□ -1.275e-8■□□□□ 9
EIF3DO15371 ALB-215ENST00000510166 532 ntTSL 39.62□□□□□ -0.871e-323■□□□□ 9
EIF3DO15371 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC8.44□□□□□ -1.061e-323■□□□□ 9
EIF3DO15371 ALB-204ENST00000441319 591 ntTSL 46.35□□□□□ -1.391e-323■□□□□ 9
EIF3DO15371 ALB-205ENST00000476441 1604 ntTSL 56.21□□□□□ -1.411e-323■□□□□ 9
EIF3DO15371 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.21□□□□□ -1.411e-323■□□□□ 9
EIF3DO15371 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.04□□□□□ -1.441e-323■□□□□ 9
EIF3DO15371 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.89□□□□□ -1.471e-323■□□□□ 9
EIF3DO15371 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.61□□□□□ -1.511e-323■□□□□ 9
EIF3DO15371 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.55□□□□□ -1.521e-323■□□□□ 9
EIF3DO15371 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.561e-323■□□□□ 9
EIF3DO15371 ALB-218ENST00000515133 665 ntTSL 24.63□□□□□ -1.671e-323■□□□□ 9
EIF3DO15371 ALB-217ENST00000514786 577 ntTSL 42.31□□□□□ -2.041e-323■□□□□ 9
EIF3DO15371 DDX5-205ENST00000577922 996 ntTSL 521.4■■□□□ 1.025e-8■□□□□ 9
Retrieved 100 of 4,069 protein–RNA pairs in 213.1 ms