RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 NISCHQ9Y2I1 1504 aa35.66■■■■□ 3.3
PSME3-215ENST00000592578 ABCC9O60706 1549 aa32.86■■■□□ 2.85
PSME3-215ENST00000592578 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
PSME3-215ENST00000592578 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
PSME3-215ENST00000592578 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
PSME3-215ENST00000592578 NACADO15069 1562 aa30.72■■■□□ 2.51
PSME3-215ENST00000592578 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
PSME3-215ENST00000592578 PABPN1Q86U42 306 aaKnown RBP eCLIP30.48■■■□□ 2.47
PSME3-215ENST00000592578 UNC13AQ9UPW8 1703 aa30.26■■■□□ 2.43
PSME3-215ENST00000592578 MYO15BQ96JP2 1530 aa30.09■■■□□ 2.41
PSME3-215ENST00000592578 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
PSME3-215ENST00000592578 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
PSME3-215ENST00000592578 CECR2Q9BXF3 1484 aa29.7■■■□□ 2.35
PSME3-215ENST00000592578 CC2D2AQ9P2K1 1620 aa29.66■■■□□ 2.34
PSME3-215ENST00000592578 DCAF1Q9Y4B6 1507 aa29.45■■■□□ 2.31
PSME3-215ENST00000592578 EIF4G1Q04637 1599 aaKnown RBP29.44■■■□□ 2.3
PSME3-215ENST00000592578 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
PSME3-215ENST00000592578 SCRIBQ14160 1630 aa29.34■■■□□ 2.29
PSME3-215ENST00000592578 DNAJC5Q9H3Z4 198 aa29.3■■■□□ 2.28
PSME3-215ENST00000592578 CUX2O14529 1486 aa28.66■■■□□ 2.18
PSME3-215ENST00000592578 ERCC6Q03468 1493 aa28.53■■■□□ 2.16
PSME3-215ENST00000592578 NCAPD3P42695 1498 aa28.33■■■□□ 2.13
PSME3-215ENST00000592578 ATAD2BQ9ULI0 1458 aa28.13■■■□□ 2.09
PSME3-215ENST00000592578 SMARCA2P51531 1590 aa28.1■■■□□ 2.09
PSME3-215ENST00000592578 HMGXB3Q12766 1538 aa28.08■■■□□ 2.08
PSME3-215ENST00000592578 NESP48681 1621 aa27.99■■■□□ 2.07
PSME3-215ENST00000592578 SMARCA4P51532 1647 aa27.95■■■□□ 2.06
PSME3-215ENST00000592578 BAZ1BQ9UIG0 1483 aaKnown RBP27.89■■■□□ 2.05
PSME3-215ENST00000592578 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
PSME3-215ENST00000592578 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
PSME3-215ENST00000592578 TRIM41Q8WV44 630 aa27.8■■■□□ 2.04
PSME3-215ENST00000592578 BAZ1AQ9NRL2 1556 aaPredicted RBP27.78■■■□□ 2.04
PSME3-215ENST00000592578 PDS5BQ9NTI5 1447 aa27.75■■■□□ 2.03
PSME3-215ENST00000592578 PEG3Q9GZU2 1588 aa27.68■■■□□ 2.02
PSME3-215ENST00000592578 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
PSME3-215ENST00000592578 CADPSQ9ULU8 1353 aa27.47■■□□□ 1.99
PSME3-215ENST00000592578 MRC2Q9UBG0 1479 aa27.46■■□□□ 1.99
PSME3-215ENST00000592578 MROH2BQ7Z745 1585 aa27.41■■□□□ 1.98
PSME3-215ENST00000592578 WDR62O43379 1518 aa27.38■■□□□ 1.97
PSME3-215ENST00000592578 OSCARQ8IYS5 282 aa27.3■■□□□ 1.96
PSME3-215ENST00000592578 CEP164Q9UPV0 1460 aa27.26■■□□□ 1.95
PSME3-215ENST00000592578 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
PSME3-215ENST00000592578 WIZO95785 1651 aa27.07■■□□□ 1.92
PSME3-215ENST00000592578 CFTRP13569 1480 aa26.99■■□□□ 1.91
PSME3-215ENST00000592578 RIMBP3CA6NJZ7 1639 aa26.89■■□□□ 1.9
PSME3-215ENST00000592578 RIMBP3BA6NNM3 1639 aa26.89■■□□□ 1.9
PSME3-215ENST00000592578 RIMBP3Q9UFD9 1639 aa26.89■■□□□ 1.9
PSME3-215ENST00000592578 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
PSME3-215ENST00000592578 ARHGEF11O15085 1522 aa26.75■■□□□ 1.87
PSME3-215ENST00000592578 TOP2AP11388 1531 aaKnown RBP26.74■■□□□ 1.87
PSME3-215ENST00000592578 IFT140Q96RY7 1462 aa26.74■■□□□ 1.87
PSME3-215ENST00000592578 PRDM2Q13029 1718 aa26.71■■□□□ 1.87
PSME3-215ENST00000592578 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
PSME3-215ENST00000592578 RSF1Q96T23 1441 aaPredicted RBP26.65■■□□□ 1.86
PSME3-215ENST00000592578 ZNF608Q9ULD9 1512 aaPredicted RBP26.64■■□□□ 1.85
PSME3-215ENST00000592578 TRHP20396 242 aaPredicted RBP26.63■■□□□ 1.85
PSME3-215ENST00000592578 ABCC8Q09428 1581 aa26.58■■□□□ 1.85
PSME3-215ENST00000592578 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
PSME3-215ENST00000592578 EIF4G3O43432 1585 aaKnown RBP26.5■■□□□ 1.83
PSME3-215ENST00000592578 FBLN2P98095 1184 aa26.44■■□□□ 1.82
PSME3-215ENST00000592578 CHD1O14646 1710 aa26.43■■□□□ 1.82
PSME3-215ENST00000592578 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
PSME3-215ENST00000592578 ARAP1Q96P48 1450 aa26.41■■□□□ 1.82
PSME3-215ENST00000592578 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
PSME3-215ENST00000592578 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
PSME3-215ENST00000592578 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.816e-7■■■■□ 23.8
PSME3-215ENST00000592578 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
PSME3-215ENST00000592578 POLA1P09884 1462 aaPredicted RBP26.21■■□□□ 1.79
PSME3-215ENST00000592578 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
PSME3-215ENST00000592578 SOGA1O94964 1423 aa26.14■■□□□ 1.78
PSME3-215ENST00000592578 SYNJ1O43426 1573 aa26.14■■□□□ 1.78
PSME3-215ENST00000592578 WDR97A6NE52 1622 aa26.14■■□□□ 1.77
PSME3-215ENST00000592578 TDRD9Q8NDG6 1382 aaKnown RBP26.11■■□□□ 1.77
PSME3-215ENST00000592578 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
PSME3-215ENST00000592578 RAD54L2Q9Y4B4 1467 aa26.1■■□□□ 1.77
PSME3-215ENST00000592578 CLASP1Q7Z460 1538 aa26.09■■□□□ 1.77
PSME3-215ENST00000592578 MAGI1Q96QZ7 1491 aaPredicted RBP26.06■■□□□ 1.76
PSME3-215ENST00000592578 GRIN2BQ13224 1484 aa25.99■■□□□ 1.75
PSME3-215ENST00000592578 SYNJ2O15056 1496 aa25.97■■□□□ 1.75
PSME3-215ENST00000592578 FGD5Q6ZNL6 1462 aa25.97■■□□□ 1.75
PSME3-215ENST00000592578 GAPVD1Q14C86 1478 aa25.91■■□□□ 1.74
PSME3-215ENST00000592578 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
PSME3-215ENST00000592578 CUX1P39880 1505 aa25.8■■□□□ 1.72
PSME3-215ENST00000592578 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
PSME3-215ENST00000592578 SUPT5HO00267 1087 aaKnown RBP25.65■■□□□ 1.7
PSME3-215ENST00000592578 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
PSME3-215ENST00000592578 GRIN2AQ12879 1464 aa25.62■■□□□ 1.69
PSME3-215ENST00000592578 CEP170Q5SW79 1584 aa25.57■■□□□ 1.68
PSME3-215ENST00000592578 ERCC6L2Q5T890 1561 aa25.56■■□□□ 1.68
PSME3-215ENST00000592578 NUP160Q12769 1436 aa25.54■■□□□ 1.68
PSME3-215ENST00000592578 ADAMTS12P58397 1594 aa25.5■■□□□ 1.67
PSME3-215ENST00000592578 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.67
PSME3-215ENST00000592578 KIF13AQ9H1H9 1805 aa25.48■■□□□ 1.67
PSME3-215ENST00000592578 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
PSME3-215ENST00000592578 FHAD1B1AJZ9 1412 aa25.47■■□□□ 1.67
PSME3-215ENST00000592578 NPM1P06748 294 aaKnown RBP eCLIP25.46■■□□□ 1.67
PSME3-215ENST00000592578 FAM69CQ0P6D2 419 aa25.39■■□□□ 1.66
PSME3-215ENST00000592578 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
PSME3-215ENST00000592578 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
PSME3-215ENST00000592578 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms