RNA–Protein interactions for RNA: ENST00000394225.6

NDUFC1-202, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 2

Gene NDUFC1, Length 664 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-202ENST00000394225 NISCHQ9Y2I1 1504 aa36.37■■■■□ 3.41
NDUFC1-202ENST00000394225 CCDC180Q9P1Z9 1646 aa32.26■■■□□ 2.75
NDUFC1-202ENST00000394225 ABCC9O60706 1549 aa31.23■■■□□ 2.59
NDUFC1-202ENST00000394225 AEBP2Q6ZN18 517 aaPredicted RBP30.67■■■□□ 2.5
NDUFC1-202ENST00000394225 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
NDUFC1-202ENST00000394225 NACADO15069 1562 aa30.25■■■□□ 2.43
NDUFC1-202ENST00000394225 DCAF8L2P0C7V8 631 aa30.24■■■□□ 2.43
NDUFC1-202ENST00000394225 RB1CC1Q8TDY2 1594 aa30.22■■■□□ 2.43
NDUFC1-202ENST00000394225 MYO15BQ96JP2 1530 aa30.17■■■□□ 2.42
NDUFC1-202ENST00000394225 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
NDUFC1-202ENST00000394225 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
NDUFC1-202ENST00000394225 UNC13AQ9UPW8 1703 aa29.48■■■□□ 2.31
NDUFC1-202ENST00000394225 SCRIBQ14160 1630 aa29.4■■■□□ 2.3
NDUFC1-202ENST00000394225 BICRAQ9NZM4 1560 aa29.23■■■□□ 2.27
NDUFC1-202ENST00000394225 PABPN1Q86U42 306 aaKnown RBP eCLIP29.19■■■□□ 2.26
NDUFC1-202ENST00000394225 SHROOM4Q9ULL8 1493 aa29.06■■■□□ 2.24
NDUFC1-202ENST00000394225 EIF4G1Q04637 1599 aaKnown RBP28.47■■■□□ 2.15
NDUFC1-202ENST00000394225 DNAJC5BQ9UF47 199 aa28.33■■■□□ 2.13
NDUFC1-202ENST00000394225 CC2D2AQ9P2K1 1620 aa28.27■■■□□ 2.12
NDUFC1-202ENST00000394225 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
NDUFC1-202ENST00000394225 BAZ1AQ9NRL2 1556 aaPredicted RBP28.2■■■□□ 2.11
NDUFC1-202ENST00000394225 SMARCA4P51532 1647 aa28.17■■■□□ 2.1
NDUFC1-202ENST00000394225 MROH2BQ7Z745 1585 aa28■■■□□ 2.07
NDUFC1-202ENST00000394225 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
NDUFC1-202ENST00000394225 ATAD2BQ9ULI0 1458 aa27.93■■■□□ 2.06
NDUFC1-202ENST00000394225 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
NDUFC1-202ENST00000394225 NCAPD3P42695 1498 aa27.89■■■□□ 2.05
NDUFC1-202ENST00000394225 HMGXB3Q12766 1538 aa27.8■■■□□ 2.04
NDUFC1-202ENST00000394225 RSF1Q96T23 1441 aaPredicted RBP27.79■■■□□ 2.04
NDUFC1-202ENST00000394225 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
NDUFC1-202ENST00000394225 WIZO95785 1651 aa27.72■■■□□ 2.03
NDUFC1-202ENST00000394225 TOP2AP11388 1531 aaKnown RBP27.48■■□□□ 1.99
NDUFC1-202ENST00000394225 SUPT5HO00267 1087 aaKnown RBP27.28■■□□□ 1.96
NDUFC1-202ENST00000394225 LAMC3Q9Y6N6 1575 aa27.14■■□□□ 1.93
NDUFC1-202ENST00000394225 CCDC88BA6NC98 1476 aa27.13■■□□□ 1.93
NDUFC1-202ENST00000394225 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
NDUFC1-202ENST00000394225 NESP48681 1621 aa27.08■■□□□ 1.93
NDUFC1-202ENST00000394225 CFTRP13569 1480 aa26.99■■□□□ 1.91
NDUFC1-202ENST00000394225 ERCC6Q03468 1493 aa26.94■■□□□ 1.9
NDUFC1-202ENST00000394225 PDS5BQ9NTI5 1447 aa26.94■■□□□ 1.9
NDUFC1-202ENST00000394225 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
NDUFC1-202ENST00000394225 KIF21AQ7Z4S6 1674 aa26.81■■□□□ 1.88
NDUFC1-202ENST00000394225 FANCD2Q9BXW9 1451 aa26.78■■□□□ 1.88
NDUFC1-202ENST00000394225 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
NDUFC1-202ENST00000394225 THOC2Q8NI27 1593 aaKnown RBP26.66■■□□□ 1.86
NDUFC1-202ENST00000394225 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
NDUFC1-202ENST00000394225 CUX2O14529 1486 aa26.56■■□□□ 1.84
NDUFC1-202ENST00000394225 WDR62O43379 1518 aa26.54■■□□□ 1.84
NDUFC1-202ENST00000394225 URB2Q14146 1524 aaKnown RBP26.47■■□□□ 1.83
NDUFC1-202ENST00000394225 ABCC8Q09428 1581 aa26.45■■□□□ 1.82
NDUFC1-202ENST00000394225 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
NDUFC1-202ENST00000394225 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
NDUFC1-202ENST00000394225 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
NDUFC1-202ENST00000394225 CUX1P39880 1505 aa26.26■■□□□ 1.79
NDUFC1-202ENST00000394225 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
NDUFC1-202ENST00000394225 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
NDUFC1-202ENST00000394225 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
NDUFC1-202ENST00000394225 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
NDUFC1-202ENST00000394225 TOP2BQ02880 1626 aa26.14■■□□□ 1.78
NDUFC1-202ENST00000394225 BIVM-ERCC5R4GMW8 1640 aa26.14■■□□□ 1.78
NDUFC1-202ENST00000394225 SYNJ1O43426 1573 aa26.12■■□□□ 1.77
NDUFC1-202ENST00000394225 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
NDUFC1-202ENST00000394225 SOGA1O94964 1423 aa26.06■■□□□ 1.76
NDUFC1-202ENST00000394225 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
NDUFC1-202ENST00000394225 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
NDUFC1-202ENST00000394225 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
NDUFC1-202ENST00000394225 WDR97A6NE52 1622 aa25.95■■□□□ 1.74
NDUFC1-202ENST00000394225 ABCA10Q8WWZ4 1543 aa25.93■■□□□ 1.74
NDUFC1-202ENST00000394225 EIF4G3O43432 1585 aaKnown RBP25.92■■□□□ 1.74
NDUFC1-202ENST00000394225 TDRD9Q8NDG6 1382 aaKnown RBP25.86■■□□□ 1.73
NDUFC1-202ENST00000394225 AQRO60306 1485 aaKnown RBP eCLIP25.85■■□□□ 1.73
NDUFC1-202ENST00000394225 ABCA5Q8WWZ7 1642 aa25.79■■□□□ 1.72
NDUFC1-202ENST00000394225 TRIM41Q8WV44 630 aa25.79■■□□□ 1.72
NDUFC1-202ENST00000394225 GAPVD1Q14C86 1478 aa25.79■■□□□ 1.72
NDUFC1-202ENST00000394225 GRIN2BQ13224 1484 aa25.75■■□□□ 1.71
NDUFC1-202ENST00000394225 PBRM1Q86U86 1689 aa25.71■■□□□ 1.71
NDUFC1-202ENST00000394225 KIF27Q86VH2 1401 aa25.68■■□□□ 1.7
NDUFC1-202ENST00000394225 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
NDUFC1-202ENST00000394225 SNAPC4Q5SXM2 1469 aa25.66■■□□□ 1.7
NDUFC1-202ENST00000394225 ERICH3Q5RHP9 1530 aa25.63■■□□□ 1.69
NDUFC1-202ENST00000394225 SYNJ2O15056 1496 aa25.55■■□□□ 1.68
NDUFC1-202ENST00000394225 CHD1O14646 1710 aa25.53■■□□□ 1.68
NDUFC1-202ENST00000394225 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
NDUFC1-202ENST00000394225 FBLN2P98095 1184 aa25.51■■□□□ 1.67
NDUFC1-202ENST00000394225 CHMP7Q8WUX9 453 aaPredicted RBP25.51■■□□□ 1.67
NDUFC1-202ENST00000394225 FHAD1B1AJZ9 1412 aa25.51■■□□□ 1.67
NDUFC1-202ENST00000394225 IGF1RP08069 1367 aa25.49■■□□□ 1.67
NDUFC1-202ENST00000394225 OSCARQ8IYS5 282 aa25.49■■□□□ 1.67
NDUFC1-202ENST00000394225 CUL7Q14999 1698 aa25.47■■□□□ 1.67
NDUFC1-202ENST00000394225 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
NDUFC1-202ENST00000394225 GRIN2AQ12879 1464 aa25.41■■□□□ 1.66
NDUFC1-202ENST00000394225 EEA1Q15075 1411 aa25.4■■□□□ 1.66
NDUFC1-202ENST00000394225 CARMIL1Q5VZK9 1371 aa25.37■■□□□ 1.65
NDUFC1-202ENST00000394225 DNAJC5Q9H3Z4 198 aa25.37■■□□□ 1.65
NDUFC1-202ENST00000394225 NUP160Q12769 1436 aa25.29■■□□□ 1.64
NDUFC1-202ENST00000394225 CSRNP3Q8WYN3 585 aa25.27■■□□□ 1.64
NDUFC1-202ENST00000394225 RAPGEF2Q9Y4G8 1499 aa25.27■■□□□ 1.64
NDUFC1-202ENST00000394225 CLASP1Q7Z460 1538 aa25.26■■□□□ 1.63
NDUFC1-202ENST00000394225 CEP170Q5SW79 1584 aa25.25■■□□□ 1.63
NDUFC1-202ENST00000394225 PRXQ9BXM0 1461 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms