RNA–Protein interactions for RNA: ENST00000505036.5

NDUFC1-206, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFC1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-206ENST00000505036 AEBP2Q6ZN18 517 aaPredicted RBP32.88■■■□□ 2.85
NDUFC1-206ENST00000505036 CHIC1Q5VXU3 224 aa31.02■■■□□ 2.56
NDUFC1-206ENST00000505036 NISCHQ9Y2I1 1504 aa30.28■■■□□ 2.44
NDUFC1-206ENST00000505036 SENP3Q9H4L4 574 aaPredicted RBP28.2■■■□□ 2.1
NDUFC1-206ENST00000505036 PHF23Q9BUL5 403 aaPredicted RBP27.78■■■□□ 2.04
NDUFC1-206ENST00000505036 CCDC180Q9P1Z9 1646 aa26.94■■□□□ 1.9
NDUFC1-206ENST00000505036 ABCC9O60706 1549 aa26.57■■□□□ 1.84
NDUFC1-206ENST00000505036 FOXD1Q16676 465 aa26.26■■□□□ 1.79
NDUFC1-206ENST00000505036 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
NDUFC1-206ENST00000505036 DCAF8L2P0C7V8 631 aa25.38■■□□□ 1.65
NDUFC1-206ENST00000505036 NACADO15069 1562 aa25.34■■□□□ 1.65
NDUFC1-206ENST00000505036 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
NDUFC1-206ENST00000505036 MYO15BQ96JP2 1530 aa25.12■■□□□ 1.61
NDUFC1-206ENST00000505036 DCAF1Q9Y4B6 1507 aa24.98■■□□□ 1.59
NDUFC1-206ENST00000505036 UNC13AQ9UPW8 1703 aa24.96■■□□□ 1.59
NDUFC1-206ENST00000505036 PABPN1Q86U42 306 aaKnown RBP eCLIP24.84■■□□□ 1.57
NDUFC1-206ENST00000505036 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
NDUFC1-206ENST00000505036 MSH5O43196 834 aa24.76■■□□□ 1.55
NDUFC1-206ENST00000505036 PLPPR3Q6T4P5 718 aa24.72■■□□□ 1.55
NDUFC1-206ENST00000505036 SCRIBQ14160 1630 aa24.64■■□□□ 1.54
NDUFC1-206ENST00000505036 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
NDUFC1-206ENST00000505036 POTEDQ86YR6 584 aa24.56■■□□□ 1.52
NDUFC1-206ENST00000505036 PIAS4Q8N2W9 510 aaPredicted RBP24.54■■□□□ 1.52
NDUFC1-206ENST00000505036 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
NDUFC1-206ENST00000505036 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
NDUFC1-206ENST00000505036 ADRA2BP18089 450 aa24.28■■□□□ 1.48
NDUFC1-206ENST00000505036 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
NDUFC1-206ENST00000505036 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
NDUFC1-206ENST00000505036 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
NDUFC1-206ENST00000505036 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
NDUFC1-206ENST00000505036 ATAD2BQ9ULI0 1458 aa23.43■■□□□ 1.34
NDUFC1-206ENST00000505036 BAZ1AQ9NRL2 1556 aaPredicted RBP23.43■■□□□ 1.34
NDUFC1-206ENST00000505036 NCAPD3P42695 1498 aa23.42■■□□□ 1.34
NDUFC1-206ENST00000505036 MROH2BQ7Z745 1585 aa23.38■■□□□ 1.33
NDUFC1-206ENST00000505036 SMARCA2P51531 1590 aa23.34■■□□□ 1.33
NDUFC1-206ENST00000505036 PEG3Q9GZU2 1588 aa23.27■■□□□ 1.32
NDUFC1-206ENST00000505036 HMGXB3Q12766 1538 aa23.27■■□□□ 1.32
NDUFC1-206ENST00000505036 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
NDUFC1-206ENST00000505036 WIZO95785 1651 aa23.13■■□□□ 1.29
NDUFC1-206ENST00000505036 RSF1Q96T23 1441 aaPredicted RBP23.04■■□□□ 1.28
NDUFC1-206ENST00000505036 NESP48681 1621 aa23■■□□□ 1.27
NDUFC1-206ENST00000505036 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
NDUFC1-206ENST00000505036 TOP2AP11388 1531 aaKnown RBP22.8■■□□□ 1.24
NDUFC1-206ENST00000505036 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
NDUFC1-206ENST00000505036 CADPSQ9ULU8 1353 aa22.73■■□□□ 1.23
NDUFC1-206ENST00000505036 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
NDUFC1-206ENST00000505036 PDS5BQ9NTI5 1447 aa22.63■■□□□ 1.21
NDUFC1-206ENST00000505036 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
NDUFC1-206ENST00000505036 CUX2O14529 1486 aa22.62■■□□□ 1.21
NDUFC1-206ENST00000505036 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
NDUFC1-206ENST00000505036 CFTRP13569 1480 aa22.57■■□□□ 1.2
NDUFC1-206ENST00000505036 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
NDUFC1-206ENST00000505036 MRC2Q9UBG0 1479 aa22.44■■□□□ 1.18
NDUFC1-206ENST00000505036 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
NDUFC1-206ENST00000505036 WDR62O43379 1518 aa22.39■■□□□ 1.17
NDUFC1-206ENST00000505036 PRDM2Q13029 1718 aa22.38■■□□□ 1.17
NDUFC1-206ENST00000505036 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
NDUFC1-206ENST00000505036 MAPK8IP2Q13387 824 aaPredicted RBP22.36■■□□□ 1.17
NDUFC1-206ENST00000505036 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
NDUFC1-206ENST00000505036 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
NDUFC1-206ENST00000505036 DMRT2Q9Y5R5 561 aa22.28■■□□□ 1.16
NDUFC1-206ENST00000505036 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
NDUFC1-206ENST00000505036 TOPBP1Q92547 1522 aa22.11■■□□□ 1.13
NDUFC1-206ENST00000505036 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
NDUFC1-206ENST00000505036 ABCC8Q09428 1581 aa22■■□□□ 1.11
NDUFC1-206ENST00000505036 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
NDUFC1-206ENST00000505036 IFT140Q96RY7 1462 aa21.96■■□□□ 1.11
NDUFC1-206ENST00000505036 POLA1P09884 1462 aaPredicted RBP21.93■■□□□ 1.1
NDUFC1-206ENST00000505036 CUX1P39880 1505 aa21.93■■□□□ 1.1
NDUFC1-206ENST00000505036 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
NDUFC1-206ENST00000505036 RAD54L2Q9Y4B4 1467 aa21.88■■□□□ 1.09
NDUFC1-206ENST00000505036 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
NDUFC1-206ENST00000505036 EIF4G3O43432 1585 aaKnown RBP21.84■■□□□ 1.09
NDUFC1-206ENST00000505036 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.08
NDUFC1-206ENST00000505036 SOGA1O94964 1423 aa21.81■■□□□ 1.08
NDUFC1-206ENST00000505036 TDRD9Q8NDG6 1382 aaKnown RBP21.74■■□□□ 1.07
NDUFC1-206ENST00000505036 SYNJ1O43426 1573 aa21.71■■□□□ 1.07
NDUFC1-206ENST00000505036 WDR97A6NE52 1622 aa21.69■■□□□ 1.06
NDUFC1-206ENST00000505036 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
NDUFC1-206ENST00000505036 WRNQ14191 1432 aaPredicted RBP eCLIP21.68■■□□□ 1.06
NDUFC1-206ENST00000505036 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
NDUFC1-206ENST00000505036 TOP2BQ02880 1626 aa21.66■■□□□ 1.06
NDUFC1-206ENST00000505036 CHD1O14646 1710 aa21.62■■□□□ 1.05
NDUFC1-206ENST00000505036 PPP4R3CPQ6ZMV5 832 aa21.61■■□□□ 1.05
NDUFC1-206ENST00000505036 ABCA10Q8WWZ4 1543 aa21.6■■□□□ 1.05
NDUFC1-206ENST00000505036 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.04
NDUFC1-206ENST00000505036 ABCA5Q8WWZ7 1642 aa21.56■■□□□ 1.04
NDUFC1-206ENST00000505036 GRIN2BQ13224 1484 aa21.55■■□□□ 1.04
NDUFC1-206ENST00000505036 GAPVD1Q14C86 1478 aa21.55■■□□□ 1.04
NDUFC1-206ENST00000505036 PBRM1Q86U86 1689 aa21.54■■□□□ 1.04
NDUFC1-206ENST00000505036 FBLN2P98095 1184 aa21.54■■□□□ 1.04
NDUFC1-206ENST00000505036 DCAF8L1A6NGE4 600 aa21.51■■□□□ 1.03
NDUFC1-206ENST00000505036 MAGI1Q96QZ7 1491 aaPredicted RBP21.49■■□□□ 1.03
NDUFC1-206ENST00000505036 CACNB1Q02641 598 aaPredicted RBP21.44■■□□□ 1.02
NDUFC1-206ENST00000505036 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
NDUFC1-206ENST00000505036 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
NDUFC1-206ENST00000505036 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
NDUFC1-206ENST00000505036 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
NDUFC1-206ENST00000505036 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
NDUFC1-206ENST00000505036 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms