RNA–Protein interactions for RNA: ENST00000503453.5

NDUFC1-204, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

TSL 3

Gene NDUFC1, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-204ENST00000503453 NISCHQ9Y2I1 1504 aa42.74■■■■■ 4.43
NDUFC1-204ENST00000503453 CCDC180Q9P1Z9 1646 aa38.01■■■■□ 3.67
NDUFC1-204ENST00000503453 ABCC9O60706 1549 aa37.05■■■■□ 3.52
NDUFC1-204ENST00000503453 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
NDUFC1-204ENST00000503453 NACADO15069 1562 aa35.68■■■■□ 3.3
NDUFC1-204ENST00000503453 ZCCHC6Q5VYS8 1495 aaKnown RBP35.62■■■■□ 3.29
NDUFC1-204ENST00000503453 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
NDUFC1-204ENST00000503453 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.27
NDUFC1-204ENST00000503453 DCAF1Q9Y4B6 1507 aa35.38■■■■□ 3.25
NDUFC1-204ENST00000503453 UNC13AQ9UPW8 1703 aa35.03■■■■□ 3.2
NDUFC1-204ENST00000503453 BICRAQ9NZM4 1560 aa34.68■■■■□ 3.14
NDUFC1-204ENST00000503453 SCRIBQ14160 1630 aa34.63■■■■□ 3.13
NDUFC1-204ENST00000503453 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
NDUFC1-204ENST00000503453 SHROOM4Q9ULL8 1493 aa34.25■■■■□ 3.07
NDUFC1-204ENST00000503453 DNAJC5BQ9UF47 199 aa33.98■■■■□ 3.03
NDUFC1-204ENST00000503453 EIF4G1Q04637 1599 aaKnown RBP33.71■■■□□ 2.99
NDUFC1-204ENST00000503453 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.96
NDUFC1-204ENST00000503453 CECR2Q9BXF3 1484 aa33.3■■■□□ 2.92
NDUFC1-204ENST00000503453 SMARCA4P51532 1647 aa33.17■■■□□ 2.9
NDUFC1-204ENST00000503453 BAZ1AQ9NRL2 1556 aaPredicted RBP33.1■■■□□ 2.89
NDUFC1-204ENST00000503453 MROH2BQ7Z745 1585 aa32.95■■■□□ 2.86
NDUFC1-204ENST00000503453 ATAD2BQ9ULI0 1458 aa32.94■■■□□ 2.86
NDUFC1-204ENST00000503453 NCAPD3P42695 1498 aa32.92■■■□□ 2.86
NDUFC1-204ENST00000503453 SMARCA2P51531 1590 aa32.89■■■□□ 2.86
NDUFC1-204ENST00000503453 PEG3Q9GZU2 1588 aa32.87■■■□□ 2.85
NDUFC1-204ENST00000503453 HMGXB3Q12766 1538 aa32.77■■■□□ 2.84
NDUFC1-204ENST00000503453 BAZ1BQ9UIG0 1483 aaKnown RBP32.64■■■□□ 2.82
NDUFC1-204ENST00000503453 WIZO95785 1651 aa32.62■■■□□ 2.81
NDUFC1-204ENST00000503453 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
NDUFC1-204ENST00000503453 TOP2AP11388 1531 aaKnown RBP32.24■■■□□ 2.75
NDUFC1-204ENST00000503453 NESP48681 1621 aa32.11■■■□□ 2.73
NDUFC1-204ENST00000503453 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
NDUFC1-204ENST00000503453 CADPSQ9ULU8 1353 aa31.94■■■□□ 2.7
NDUFC1-204ENST00000503453 ERCC6Q03468 1493 aa31.87■■■□□ 2.69
NDUFC1-204ENST00000503453 CCDC88BA6NC98 1476 aa31.85■■■□□ 2.69
NDUFC1-204ENST00000503453 KIF21AQ7Z4S6 1674 aa31.8■■■□□ 2.68
NDUFC1-204ENST00000503453 CFTRP13569 1480 aa31.78■■■□□ 2.68
NDUFC1-204ENST00000503453 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.68
NDUFC1-204ENST00000503453 SUPT5HO00267 1087 aaKnown RBP31.71■■■□□ 2.67
NDUFC1-204ENST00000503453 PRDM2Q13029 1718 aa31.66■■■□□ 2.66
NDUFC1-204ENST00000503453 THOC2Q8NI27 1593 aaKnown RBP31.64■■■□□ 2.66
NDUFC1-204ENST00000503453 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
NDUFC1-204ENST00000503453 CUX2O14529 1486 aa31.56■■■□□ 2.64
NDUFC1-204ENST00000503453 CEP164Q9UPV0 1460 aa31.51■■■□□ 2.63
NDUFC1-204ENST00000503453 MRC2Q9UBG0 1479 aa31.46■■■□□ 2.63
NDUFC1-204ENST00000503453 WDR62O43379 1518 aa31.4■■■□□ 2.62
NDUFC1-204ENST00000503453 URB2Q14146 1524 aaKnown RBP31.28■■■□□ 2.6
NDUFC1-204ENST00000503453 TOPBP1Q92547 1522 aa31.09■■■□□ 2.57
NDUFC1-204ENST00000503453 DNMBPQ6XZF7 1577 aa31.07■■■□□ 2.56
NDUFC1-204ENST00000503453 ABCC8Q09428 1581 aa31.06■■■□□ 2.56
NDUFC1-204ENST00000503453 CUX1P39880 1505 aa30.9■■■□□ 2.54
NDUFC1-204ENST00000503453 IFT140Q96RY7 1462 aa30.85■■■□□ 2.53
NDUFC1-204ENST00000503453 POLA1P09884 1462 aaPredicted RBP30.83■■■□□ 2.53
NDUFC1-204ENST00000503453 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
NDUFC1-204ENST00000503453 FGD5Q6ZNL6 1462 aa30.76■■■□□ 2.52
NDUFC1-204ENST00000503453 ZNF608Q9ULD9 1512 aaPredicted RBP30.74■■■□□ 2.51
NDUFC1-204ENST00000503453 RAD54L2Q9Y4B4 1467 aa30.7■■■□□ 2.5
NDUFC1-204ENST00000503453 WRNQ14191 1432 aaPredicted RBP eCLIP30.68■■■□□ 2.5
NDUFC1-204ENST00000503453 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
NDUFC1-204ENST00000503453 SOGA1O94964 1423 aa30.67■■■□□ 2.5
NDUFC1-204ENST00000503453 SYNJ1O43426 1573 aa30.66■■■□□ 2.5
NDUFC1-204ENST00000503453 TOP2BQ02880 1626 aa30.66■■■□□ 2.5
NDUFC1-204ENST00000503453 EIF4G3O43432 1585 aaKnown RBP30.63■■■□□ 2.49
NDUFC1-204ENST00000503453 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
NDUFC1-204ENST00000503453 AQRO60306 1485 aaKnown RBP eCLIP30.56■■■□□ 2.48
NDUFC1-204ENST00000503453 DNAJC5Q9H3Z4 198 aa30.52■■■□□ 2.48
NDUFC1-204ENST00000503453 TDRD9Q8NDG6 1382 aaKnown RBP30.49■■■□□ 2.47
NDUFC1-204ENST00000503453 ABCA10Q8WWZ4 1543 aa30.47■■■□□ 2.47
NDUFC1-204ENST00000503453 ABCA5Q8WWZ7 1642 aa30.38■■■□□ 2.45
NDUFC1-204ENST00000503453 PBRM1Q86U86 1689 aa30.34■■■□□ 2.45
NDUFC1-204ENST00000503453 GAPVD1Q14C86 1478 aa30.33■■■□□ 2.45
NDUFC1-204ENST00000503453 GRIN2BQ13224 1484 aa30.31■■■□□ 2.44
NDUFC1-204ENST00000503453 CHD1O14646 1710 aa30.28■■■□□ 2.44
NDUFC1-204ENST00000503453 SNAPC4Q5SXM2 1469 aa30.27■■■□□ 2.44
NDUFC1-204ENST00000503453 MAGI1Q96QZ7 1491 aaPredicted RBP30.24■■■□□ 2.43
NDUFC1-204ENST00000503453 OSCARQ8IYS5 282 aa30.23■■■□□ 2.43
NDUFC1-204ENST00000503453 SYNJ2O15056 1496 aa30.12■■■□□ 2.41
NDUFC1-204ENST00000503453 ERICH3Q5RHP9 1530 aa30.11■■■□□ 2.41
NDUFC1-204ENST00000503453 FBLN2P98095 1184 aa30.08■■■□□ 2.41
NDUFC1-204ENST00000503453 ADAMTS12P58397 1594 aa30.07■■■□□ 2.4
NDUFC1-204ENST00000503453 CHMP7Q8WUX9 453 aaPredicted RBP30.04■■■□□ 2.4
NDUFC1-204ENST00000503453 KIF27Q86VH2 1401 aa30.02■■■□□ 2.4
NDUFC1-204ENST00000503453 FHAD1B1AJZ9 1412 aa29.97■■■□□ 2.39
NDUFC1-204ENST00000503453 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
NDUFC1-204ENST00000503453 GRIN2AQ12879 1464 aa29.94■■■□□ 2.38
NDUFC1-204ENST00000503453 IGF1RP08069 1367 aa29.92■■■□□ 2.38
NDUFC1-204ENST00000503453 CLASP1Q7Z460 1538 aa29.92■■■□□ 2.38
NDUFC1-204ENST00000503453 CUL7Q14999 1698 aa29.86■■■□□ 2.37
NDUFC1-204ENST00000503453 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
NDUFC1-204ENST00000503453 RIMBP3CA6NJZ7 1639 aa29.82■■■□□ 2.36
NDUFC1-204ENST00000503453 RIMBP3BA6NNM3 1639 aa29.82■■■□□ 2.36
NDUFC1-204ENST00000503453 RIMBP3Q9UFD9 1639 aa29.82■■■□□ 2.36
NDUFC1-204ENST00000503453 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
NDUFC1-204ENST00000503453 NUP160Q12769 1436 aa29.82■■■□□ 2.36
NDUFC1-204ENST00000503453 ARHGEF11O15085 1522 aa29.8■■■□□ 2.36
NDUFC1-204ENST00000503453 CARMIL1Q5VZK9 1371 aa29.72■■■□□ 2.35
NDUFC1-204ENST00000503453 CHIC1Q5VXU3 224 aa29.69■■■□□ 2.34
NDUFC1-204ENST00000503453 SHROOM2Q13796 1616 aa29.63■■■□□ 2.33
NDUFC1-204ENST00000503453 ARAP1Q96P48 1450 aa29.57■■■□□ 2.32
NDUFC1-204ENST00000503453 RAPGEF2Q9Y4G8 1499 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms