RNA–Protein interactions for RNA: ENST00000586312.5

PSME3-208, Transcript of proteasome activator subunit 3, humanhuman

TSL 5

Gene PSME3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-208ENST00000586312 NISCHQ9Y2I1 1504 aa34.06■■■■□ 3.04
PSME3-208ENST00000586312 CCDC180Q9P1Z9 1646 aa30.46■■■□□ 2.47
PSME3-208ENST00000586312 ABCC9O60706 1549 aa30.02■■■□□ 2.4
PSME3-208ENST00000586312 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
PSME3-208ENST00000586312 NACADO15069 1562 aa28.64■■■□□ 2.18
PSME3-208ENST00000586312 DCAF8L2P0C7V8 631 aa28.46■■■□□ 2.15
PSME3-208ENST00000586312 MYO15BQ96JP2 1530 aa28.36■■■□□ 2.13
PSME3-208ENST00000586312 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PSME3-208ENST00000586312 ZCCHC6Q5VYS8 1495 aaKnown RBP28.31■■■□□ 2.12
PSME3-208ENST00000586312 DCAF1Q9Y4B6 1507 aa28.14■■■□□ 2.1
PSME3-208ENST00000586312 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
PSME3-208ENST00000586312 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
PSME3-208ENST00000586312 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
PSME3-208ENST00000586312 SCRIBQ14160 1630 aa27.74■■■□□ 2.03
PSME3-208ENST00000586312 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
PSME3-208ENST00000586312 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
PSME3-208ENST00000586312 CC2D2AQ9P2K1 1620 aa27.2■■□□□ 1.95
PSME3-208ENST00000586312 CECR2Q9BXF3 1484 aa26.98■■□□□ 1.91
PSME3-208ENST00000586312 SMARCA4P51532 1647 aa26.53■■□□□ 1.84
PSME3-208ENST00000586312 NCAPD3P42695 1498 aa26.42■■□□□ 1.82
PSME3-208ENST00000586312 ATAD2BQ9ULI0 1458 aa26.41■■□□□ 1.82
PSME3-208ENST00000586312 BAZ1AQ9NRL2 1556 aaPredicted RBP26.38■■□□□ 1.81
PSME3-208ENST00000586312 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
PSME3-208ENST00000586312 HMGXB3Q12766 1538 aa26.28■■□□□ 1.8
PSME3-208ENST00000586312 MROH2BQ7Z745 1585 aa26.28■■□□□ 1.8
PSME3-208ENST00000586312 PEG3Q9GZU2 1588 aa26.26■■□□□ 1.79
PSME3-208ENST00000586312 BAZ1BQ9UIG0 1483 aaKnown RBP26.13■■□□□ 1.77
PSME3-208ENST00000586312 WIZO95785 1651 aa26.04■■□□□ 1.76
PSME3-208ENST00000586312 NESP48681 1621 aa25.95■■□□□ 1.74
PSME3-208ENST00000586312 ERCC6Q03468 1493 aa25.82■■□□□ 1.72
PSME3-208ENST00000586312 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
PSME3-208ENST00000586312 LAMC3Q9Y6N6 1575 aa25.79■■□□□ 1.72
PSME3-208ENST00000586312 KIF21AQ7Z4S6 1674 aa25.72■■□□□ 1.71
PSME3-208ENST00000586312 CUX2O14529 1486 aa25.69■■□□□ 1.7
PSME3-208ENST00000586312 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
PSME3-208ENST00000586312 TOP2AP11388 1531 aaKnown RBP25.64■■□□□ 1.7
PSME3-208ENST00000586312 CADPSQ9ULU8 1353 aa25.6■■□□□ 1.69
PSME3-208ENST00000586312 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
PSME3-208ENST00000586312 CFTRP13569 1480 aa25.42■■□□□ 1.66
PSME3-208ENST00000586312 PRDM2Q13029 1718 aa25.4■■□□□ 1.66
PSME3-208ENST00000586312 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
PSME3-208ENST00000586312 MRC2Q9UBG0 1479 aa25.35■■□□□ 1.65
PSME3-208ENST00000586312 FANCD2Q9BXW9 1451 aa25.33■■□□□ 1.65
PSME3-208ENST00000586312 WDR62O43379 1518 aa25.32■■□□□ 1.64
PSME3-208ENST00000586312 CEP164Q9UPV0 1460 aa25.31■■□□□ 1.64
PSME3-208ENST00000586312 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
PSME3-208ENST00000586312 URB2Q14146 1524 aaKnown RBP25.15■■□□□ 1.62
PSME3-208ENST00000586312 TOPBP1Q92547 1522 aa24.93■■□□□ 1.58
PSME3-208ENST00000586312 DNMBPQ6XZF7 1577 aa24.88■■□□□ 1.57
PSME3-208ENST00000586312 SUPT5HO00267 1087 aaKnown RBP24.87■■□□□ 1.57
PSME3-208ENST00000586312 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
PSME3-208ENST00000586312 IFT140Q96RY7 1462 aa24.78■■□□□ 1.56
PSME3-208ENST00000586312 ZNF608Q9ULD9 1512 aaPredicted RBP24.78■■□□□ 1.56
PSME3-208ENST00000586312 TARBP1Q13395 1621 aaKnown RBP24.75■■□□□ 1.55
PSME3-208ENST00000586312 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
PSME3-208ENST00000586312 EIF4G3O43432 1585 aaKnown RBP24.68■■□□□ 1.54
PSME3-208ENST00000586312 CUX1P39880 1505 aa24.66■■□□□ 1.54
PSME3-208ENST00000586312 RAD54L2Q9Y4B4 1467 aa24.61■■□□□ 1.53
PSME3-208ENST00000586312 FGD5Q6ZNL6 1462 aa24.58■■□□□ 1.53
PSME3-208ENST00000586312 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.524e-7■■■■□ 21.8
PSME3-208ENST00000586312 SOGA1O94964 1423 aa24.53■■□□□ 1.52
PSME3-208ENST00000586312 OSCARQ8IYS5 282 aa24.53■■□□□ 1.52
PSME3-208ENST00000586312 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
PSME3-208ENST00000586312 CHD1O14646 1710 aa24.52■■□□□ 1.52
PSME3-208ENST00000586312 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
PSME3-208ENST00000586312 BIVM-ERCC5R4GMW8 1640 aa24.41■■□□□ 1.5
PSME3-208ENST00000586312 PBRM1Q86U86 1689 aa24.37■■□□□ 1.49
PSME3-208ENST00000586312 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
PSME3-208ENST00000586312 TOP2BQ02880 1626 aa24.36■■□□□ 1.49
PSME3-208ENST00000586312 SNAPC4Q5SXM2 1469 aa24.32■■□□□ 1.48
PSME3-208ENST00000586312 RIMBP3CA6NJZ7 1639 aa24.32■■□□□ 1.48
PSME3-208ENST00000586312 RIMBP3BA6NNM3 1639 aa24.32■■□□□ 1.48
PSME3-208ENST00000586312 RIMBP3Q9UFD9 1639 aa24.32■■□□□ 1.48
PSME3-208ENST00000586312 ABCA10Q8WWZ4 1543 aa24.32■■□□□ 1.48
PSME3-208ENST00000586312 ABCA5Q8WWZ7 1642 aa24.32■■□□□ 1.48
PSME3-208ENST00000586312 WRNQ14191 1432 aaPredicted RBP eCLIP24.3■■□□□ 1.48
PSME3-208ENST00000586312 GRIN2BQ13224 1484 aa24.28■■□□□ 1.48
PSME3-208ENST00000586312 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
PSME3-208ENST00000586312 GAPVD1Q14C86 1478 aa24.26■■□□□ 1.47
PSME3-208ENST00000586312 MAGI1Q96QZ7 1491 aaPredicted RBP24.25■■□□□ 1.47
PSME3-208ENST00000586312 FBLN2P98095 1184 aa24.23■■□□□ 1.47
PSME3-208ENST00000586312 ARHGEF11O15085 1522 aa24.23■■□□□ 1.47
PSME3-208ENST00000586312 SYNJ2O15056 1496 aa24.17■■□□□ 1.46
PSME3-208ENST00000586312 CLASP1Q7Z460 1538 aa24.16■■□□□ 1.46
PSME3-208ENST00000586312 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
PSME3-208ENST00000586312 ADAMTS12P58397 1594 aa24.08■■□□□ 1.45
PSME3-208ENST00000586312 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
PSME3-208ENST00000586312 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
PSME3-208ENST00000586312 GRIN2AQ12879 1464 aa24■■□□□ 1.43
PSME3-208ENST00000586312 CEP170Q5SW79 1584 aa23.96■■□□□ 1.43
PSME3-208ENST00000586312 CYB5RLQ6IPT4 315 aa23.95■■□□□ 1.42
PSME3-208ENST00000586312 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
PSME3-208ENST00000586312 NUP160Q12769 1436 aa23.92■■□□□ 1.42
PSME3-208ENST00000586312 ERCC6L2Q5T890 1561 aa23.85■■□□□ 1.41
PSME3-208ENST00000586312 SHROOM2Q13796 1616 aa23.84■■□□□ 1.41
PSME3-208ENST00000586312 KIF27Q86VH2 1401 aa23.79■■□□□ 1.4
PSME3-208ENST00000586312 IGF1RP08069 1367 aa23.78■■□□□ 1.4
PSME3-208ENST00000586312 CUL7Q14999 1698 aa23.77■■□□□ 1.4
PSME3-208ENST00000586312 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
PSME3-208ENST00000586312 JPH4Q96JJ6 628 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms