RNA–Protein interactions for RNA: ENST00000441946.6

PSME3-202, Transcript of proteasome activator subunit 3, humanhuman

TSL 2 BASIC

Gene PSME3, Length 2,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-202ENST00000441946 NISCHQ9Y2I1 1504 aa34.15■■■■□ 3.06
PSME3-202ENST00000441946 SHROOM4Q9ULL8 1493 aa29.54■■■□□ 2.32
PSME3-202ENST00000441946 DCAF8L2P0C7V8 631 aa29.02■■■□□ 2.24
PSME3-202ENST00000441946 SUPT5HO00267 1087 aaKnown RBP28.89■■■□□ 2.22
PSME3-202ENST00000441946 CCDC180Q9P1Z9 1646 aa28.82■■■□□ 2.2
PSME3-202ENST00000441946 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
PSME3-202ENST00000441946 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
PSME3-202ENST00000441946 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
PSME3-202ENST00000441946 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
PSME3-202ENST00000441946 ABCC9O60706 1549 aa27.42■■□□□ 1.98
PSME3-202ENST00000441946 SCRIBQ14160 1630 aa27.41■■□□□ 1.98
PSME3-202ENST00000441946 LOC105371045A0A1W2PR82 267 aa27.17■■□□□ 1.94
PSME3-202ENST00000441946 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
PSME3-202ENST00000441946 PCGF6Q9BYE7 350 aa26.93■■□□□ 1.9
PSME3-202ENST00000441946 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
PSME3-202ENST00000441946 NACADO15069 1562 aa26.82■■□□□ 1.88
PSME3-202ENST00000441946 FAM9AQ8IZU1 332 aaPredicted RBP26.79■■□□□ 1.88
PSME3-202ENST00000441946 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
PSME3-202ENST00000441946 RB1CC1Q8TDY2 1594 aa26.77■■□□□ 1.88
PSME3-202ENST00000441946 TRIM41Q8WV44 630 aa26.76■■□□□ 1.87
PSME3-202ENST00000441946 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
PSME3-202ENST00000441946 HRCP23327 699 aa26.57■■□□□ 1.84
PSME3-202ENST00000441946 WIZO95785 1651 aa26.48■■□□□ 1.83
PSME3-202ENST00000441946 PABPN1Q86U42 306 aaKnown RBP eCLIP26.38■■□□□ 1.81
PSME3-202ENST00000441946 PPARGC1BQ86YN6 1023 aaKnown RBP26.37■■□□□ 1.81
PSME3-202ENST00000441946 TRIM26Q12899 539 aaPredicted RBP26.2■■□□□ 1.79
PSME3-202ENST00000441946 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
PSME3-202ENST00000441946 UNC13AQ9UPW8 1703 aa26.05■■□□□ 1.76
PSME3-202ENST00000441946 SMARCA4P51532 1647 aa26.01■■□□□ 1.75
PSME3-202ENST00000441946 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
PSME3-202ENST00000441946 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
PSME3-202ENST00000441946 TOP2AP11388 1531 aaKnown RBP25.92■■□□□ 1.74
PSME3-202ENST00000441946 SMARCA2P51531 1590 aa25.83■■□□□ 1.73
PSME3-202ENST00000441946 EIF4G1Q04637 1599 aaKnown RBP25.83■■□□□ 1.73
PSME3-202ENST00000441946 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
PSME3-202ENST00000441946 TTBK1Q5TCY1 1321 aaPredicted RBP25.81■■□□□ 1.72
PSME3-202ENST00000441946 SOGA1O94964 1423 aa25.72■■□□□ 1.71
PSME3-202ENST00000441946 RUSC2Q8N2Y8 1516 aa25.62■■□□□ 1.69
PSME3-202ENST00000441946 UBTFP17480 764 aaKnown RBP25.59■■□□□ 1.69
PSME3-202ENST00000441946 CSRNP3Q8WYN3 585 aa25.53■■□□□ 1.68
PSME3-202ENST00000441946 ATAD2BQ9ULI0 1458 aa25.48■■□□□ 1.67
PSME3-202ENST00000441946 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.46■■□□□ 1.67
PSME3-202ENST00000441946 WRNQ14191 1432 aaPredicted RBP eCLIP25.45■■□□□ 1.67
PSME3-202ENST00000441946 CEP162Q5TB80 1403 aa25.43■■□□□ 1.66
PSME3-202ENST00000441946 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
PSME3-202ENST00000441946 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
PSME3-202ENST00000441946 ZEB1P37275 1124 aaPredicted RBP25.39■■□□□ 1.66
PSME3-202ENST00000441946 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
PSME3-202ENST00000441946 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
PSME3-202ENST00000441946 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
PSME3-202ENST00000441946 CCER1Q8TC90 406 aaPredicted RBP25.29■■□□□ 1.64
PSME3-202ENST00000441946 EEA1Q15075 1411 aa25.22■■□□□ 1.63
PSME3-202ENST00000441946 GOLGA3Q08378 1498 aa25.18■■□□□ 1.62
PSME3-202ENST00000441946 CEP164Q9UPV0 1460 aa25.04■■□□□ 1.6
PSME3-202ENST00000441946 RAPGEF2Q9Y4G8 1499 aa25.04■■□□□ 1.6
PSME3-202ENST00000441946 CLIP1P30622 1438 aa25■■□□□ 1.59
PSME3-202ENST00000441946 HNRNPUL2Q1KMD3 747 aaKnown RBP24.99■■□□□ 1.59
PSME3-202ENST00000441946 NCAPD3P42695 1498 aa24.93■■□□□ 1.58
PSME3-202ENST00000441946 APLP2Q06481 763 aa24.88■■□□□ 1.57
PSME3-202ENST00000441946 KIF21BO75037 1637 aa24.86■■□□□ 1.57
PSME3-202ENST00000441946 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
PSME3-202ENST00000441946 CUX1P39880 1505 aa24.8■■□□□ 1.56
PSME3-202ENST00000441946 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
PSME3-202ENST00000441946 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
PSME3-202ENST00000441946 CFTRP13569 1480 aa24.72■■□□□ 1.55
PSME3-202ENST00000441946 BIVM-ERCC5R4GMW8 1640 aa24.69■■□□□ 1.54
PSME3-202ENST00000441946 PRXQ9BXM0 1461 aa24.66■■□□□ 1.54
PSME3-202ENST00000441946 KIF27Q86VH2 1401 aa24.65■■□□□ 1.54
PSME3-202ENST00000441946 KANK4Q5T7N3 995 aaPredicted RBP24.65■■□□□ 1.54
PSME3-202ENST00000441946 DIEXFQ68CQ4 756 aaKnown RBP24.62■■□□□ 1.53
PSME3-202ENST00000441946 CADPSQ9ULU8 1353 aa24.56■■□□□ 1.52
PSME3-202ENST00000441946 CUX2O14529 1486 aa24.55■■□□□ 1.52
PSME3-202ENST00000441946 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
PSME3-202ENST00000441946 ERICH3Q5RHP9 1530 aa24.49■■□□□ 1.51
PSME3-202ENST00000441946 ITGAEP38570 1179 aa24.49■■□□□ 1.51
PSME3-202ENST00000441946 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
PSME3-202ENST00000441946 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
PSME3-202ENST00000441946 P3H3Q8IVL6 736 aa24.47■■□□□ 1.51
PSME3-202ENST00000441946 IGF1RP08069 1367 aa24.47■■□□□ 1.51
PSME3-202ENST00000441946 FGD5Q6ZNL6 1462 aa24.42■■□□□ 1.5
PSME3-202ENST00000441946 ZNF316A6NFI3 1004 aaPredicted RBP24.41■■□□□ 1.5
PSME3-202ENST00000441946 ATP1B4Q9UN42 357 aaPredicted RBP24.4■■□□□ 1.5
PSME3-202ENST00000441946 ARHGAP35Q9NRY4 1499 aa24.39■■□□□ 1.49
PSME3-202ENST00000441946 DNAJC5BQ9UF47 199 aa24.38■■□□□ 1.49
PSME3-202ENST00000441946 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
PSME3-202ENST00000441946 NESP48681 1621 aa24.38■■□□□ 1.49
PSME3-202ENST00000441946 FANCD2Q9BXW9 1451 aa24.34■■□□□ 1.49
PSME3-202ENST00000441946 NEUROD1Q13562 356 aa24.34■■□□□ 1.49
PSME3-202ENST00000441946 RAD54L2Q9Y4B4 1467 aa24.32■■□□□ 1.48
PSME3-202ENST00000441946 YTHDC1Q96MU7 727 aaKnown RBP24.28■■□□□ 1.48
PSME3-202ENST00000441946 ACIN1Q9UKV3 1341 aaKnown RBP24.22■■□□□ 1.47
PSME3-202ENST00000441946 DHX57Q6P158 1386 aaKnown RBP24.19■■□□□ 1.46
PSME3-202ENST00000441946 PRDM2Q13029 1718 aa24.18■■□□□ 1.46
PSME3-202ENST00000441946 MIER1Q8N108 512 aa24.18■■□□□ 1.46
PSME3-202ENST00000441946 CCNB3Q8WWL7 1395 aa24.17■■□□□ 1.46
PSME3-202ENST00000441946 POLA1P09884 1462 aaPredicted RBP24.14■■□□□ 1.46
PSME3-202ENST00000441946 FAM50AQ14320 339 aaKnown RBP24.14■■□□□ 1.45
PSME3-202ENST00000441946 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
PSME3-202ENST00000441946 RRBP1Q9P2E9 1410 aaKnown RBP24.12■■□□□ 1.45
PSME3-202ENST00000441946 TDRD9Q8NDG6 1382 aaKnown RBP24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 304 ms