RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
MCF2L-210ENST00000409954 CCDC180Q9P1Z9 1646 aa31.99■■■□□ 2.71
MCF2L-210ENST00000409954 ABCC9O60706 1549 aa31.96■■■□□ 2.71
MCF2L-210ENST00000409954 RB1CC1Q8TDY2 1594 aa30.49■■■□□ 2.47
MCF2L-210ENST00000409954 DCAF8L2P0C7V8 631 aa30.41■■■□□ 2.46
MCF2L-210ENST00000409954 NACADO15069 1562 aa30.35■■■□□ 2.45
MCF2L-210ENST00000409954 MYO15BQ96JP2 1530 aa30.02■■■□□ 2.4
MCF2L-210ENST00000409954 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
MCF2L-210ENST00000409954 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
MCF2L-210ENST00000409954 ZCCHC6Q5VYS8 1495 aaKnown RBP29.69■■■□□ 2.34
MCF2L-210ENST00000409954 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
MCF2L-210ENST00000409954 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
MCF2L-210ENST00000409954 BICRAQ9NZM4 1560 aa29.52■■■□□ 2.32
MCF2L-210ENST00000409954 SHROOM4Q9ULL8 1493 aa29.25■■■□□ 2.27
MCF2L-210ENST00000409954 SCRIBQ14160 1630 aa29.14■■■□□ 2.26
MCF2L-210ENST00000409954 CECR2Q9BXF3 1484 aa28.82■■■□□ 2.2
MCF2L-210ENST00000409954 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
MCF2L-210ENST00000409954 EIF4G1Q04637 1599 aaKnown RBP28.81■■■□□ 2.2
MCF2L-210ENST00000409954 NCAPD3P42695 1498 aa28.09■■■□□ 2.09
MCF2L-210ENST00000409954 ATAD2BQ9ULI0 1458 aa27.96■■■□□ 2.07
MCF2L-210ENST00000409954 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
MCF2L-210ENST00000409954 SMARCA4P51532 1647 aa27.85■■■□□ 2.05
MCF2L-210ENST00000409954 BAZ1AQ9NRL2 1556 aaPredicted RBP27.82■■■□□ 2.04
MCF2L-210ENST00000409954 HMGXB3Q12766 1538 aa27.77■■■□□ 2.04
MCF2L-210ENST00000409954 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
MCF2L-210ENST00000409954 PEG3Q9GZU2 1588 aa27.64■■■□□ 2.01
MCF2L-210ENST00000409954 ERCC6Q03468 1493 aa27.63■■■□□ 2.01
MCF2L-210ENST00000409954 MROH2BQ7Z745 1585 aa27.6■■■□□ 2.01
MCF2L-210ENST00000409954 CUX2O14529 1486 aa27.54■■■□□ 2
MCF2L-210ENST00000409954 DNAJC5Q9H3Z4 198 aa27.52■■■□□ 2
MCF2L-210ENST00000409954 NESP48681 1621 aa27.46■■□□□ 1.99
MCF2L-210ENST00000409954 LAMC3Q9Y6N6 1575 aa27.33■■□□□ 1.97
MCF2L-210ENST00000409954 PDS5BQ9NTI5 1447 aa27.3■■□□□ 1.96
MCF2L-210ENST00000409954 CADPSQ9ULU8 1353 aa27.26■■□□□ 1.95
MCF2L-210ENST00000409954 WIZO95785 1651 aa27.2■■□□□ 1.94
MCF2L-210ENST00000409954 RSF1Q96T23 1441 aaPredicted RBP27.16■■□□□ 1.94
MCF2L-210ENST00000409954 THOC2Q8NI27 1593 aaKnown RBP27.05■■□□□ 1.92
MCF2L-210ENST00000409954 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
MCF2L-210ENST00000409954 MRC2Q9UBG0 1479 aa26.94■■□□□ 1.9
MCF2L-210ENST00000409954 CFTRP13569 1480 aa26.93■■□□□ 1.9
MCF2L-210ENST00000409954 TOP2AP11388 1531 aaKnown RBP26.92■■□□□ 1.9
MCF2L-210ENST00000409954 FANCD2Q9BXW9 1451 aa26.87■■□□□ 1.89
MCF2L-210ENST00000409954 CEP164Q9UPV0 1460 aa26.87■■□□□ 1.89
MCF2L-210ENST00000409954 WDR62O43379 1518 aa26.81■■□□□ 1.88
MCF2L-210ENST00000409954 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
MCF2L-210ENST00000409954 URB2Q14146 1524 aaKnown RBP26.58■■□□□ 1.85
MCF2L-210ENST00000409954 OSCARQ8IYS5 282 aa26.49■■□□□ 1.83
MCF2L-210ENST00000409954 ABCC8Q09428 1581 aa26.42■■□□□ 1.82
MCF2L-210ENST00000409954 PRDM2Q13029 1718 aa26.39■■□□□ 1.81
MCF2L-210ENST00000409954 IFT140Q96RY7 1462 aa26.36■■□□□ 1.81
MCF2L-210ENST00000409954 TOPBP1Q92547 1522 aa26.34■■□□□ 1.81
MCF2L-210ENST00000409954 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
MCF2L-210ENST00000409954 ZNF608Q9ULD9 1512 aaPredicted RBP26.23■■□□□ 1.79
MCF2L-210ENST00000409954 DNMBPQ6XZF7 1577 aa26.22■■□□□ 1.79
MCF2L-210ENST00000409954 SUPT5HO00267 1087 aaKnown RBP26.15■■□□□ 1.78
MCF2L-210ENST00000409954 SOGA1O94964 1423 aa26.09■■□□□ 1.77
MCF2L-210ENST00000409954 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
MCF2L-210ENST00000409954 POLA1P09884 1462 aaPredicted RBP26.08■■□□□ 1.77
MCF2L-210ENST00000409954 TARBP1Q13395 1621 aaKnown RBP26.03■■□□□ 1.76
MCF2L-210ENST00000409954 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
MCF2L-210ENST00000409954 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
MCF2L-210ENST00000409954 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
MCF2L-210ENST00000409954 FBLN2P98095 1184 aa25.99■■□□□ 1.75
MCF2L-210ENST00000409954 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
MCF2L-210ENST00000409954 CUX1P39880 1505 aa25.89■■□□□ 1.74
MCF2L-210ENST00000409954 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
MCF2L-210ENST00000409954 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
MCF2L-210ENST00000409954 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
MCF2L-210ENST00000409954 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
MCF2L-210ENST00000409954 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
MCF2L-210ENST00000409954 ARHGEF11O15085 1522 aa25.82■■□□□ 1.72
MCF2L-210ENST00000409954 CYB5RLQ6IPT4 315 aa25.81■■□□□ 1.72
MCF2L-210ENST00000409954 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
MCF2L-210ENST00000409954 SNAPC4Q5SXM2 1469 aa25.75■■□□□ 1.71
MCF2L-210ENST00000409954 MAGI1Q96QZ7 1491 aaPredicted RBP25.75■■□□□ 1.71
MCF2L-210ENST00000409954 CHD1O14646 1710 aa25.72■■□□□ 1.71
MCF2L-210ENST00000409954 GAPVD1Q14C86 1478 aa25.71■■□□□ 1.71
MCF2L-210ENST00000409954 WRNQ14191 1432 aaPredicted RBP eCLIP25.69■■□□□ 1.7
MCF2L-210ENST00000409954 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
MCF2L-210ENST00000409954 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
MCF2L-210ENST00000409954 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
MCF2L-210ENST00000409954 ARAP1Q96P48 1450 aa25.57■■□□□ 1.68
MCF2L-210ENST00000409954 CLASP1Q7Z460 1538 aa25.54■■□□□ 1.68
MCF2L-210ENST00000409954 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
MCF2L-210ENST00000409954 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
MCF2L-210ENST00000409954 TRHP20396 242 aaPredicted RBP25.49■■□□□ 1.67
MCF2L-210ENST00000409954 BIVM-ERCC5R4GMW8 1640 aa25.47■■□□□ 1.67
MCF2L-210ENST00000409954 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
MCF2L-210ENST00000409954 FHAD1B1AJZ9 1412 aa25.42■■□□□ 1.66
MCF2L-210ENST00000409954 GRIN2AQ12879 1464 aa25.4■■□□□ 1.66
MCF2L-210ENST00000409954 ERICH3Q5RHP9 1530 aa25.36■■□□□ 1.65
MCF2L-210ENST00000409954 NUP160Q12769 1436 aa25.34■■□□□ 1.65
MCF2L-210ENST00000409954 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
MCF2L-210ENST00000409954 JPH4Q96JJ6 628 aa25.25■■□□□ 1.63
MCF2L-210ENST00000409954 CEP170Q5SW79 1584 aa25.22■■□□□ 1.63
MCF2L-210ENST00000409954 IGF1RP08069 1367 aa25.18■■□□□ 1.62
MCF2L-210ENST00000409954 KIF27Q86VH2 1401 aa25.17■■□□□ 1.62
MCF2L-210ENST00000409954 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
MCF2L-210ENST00000409954 ERCC6L2Q5T890 1561 aa25.12■■□□□ 1.61
MCF2L-210ENST00000409954 SHROOM2Q13796 1616 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms