RNA–Protein interactions for RNA: ENST00000426414.6

WDFY3-203, Transcript of WD repeat and FYVE domain containing 3, humanhuman

TSL 2

Gene WDFY3, Length 3,428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDFY3-203ENST00000426414 NISCHQ9Y2I1 1504 aa15.46■□□□□ 0.07
WDFY3-203ENST00000426414 CCDC180Q9P1Z9 1646 aa13.46□□□□□ -0.25
WDFY3-203ENST00000426414 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
WDFY3-203ENST00000426414 CHIC1Q5VXU3 224 aa13.14□□□□□ -0.31
WDFY3-203ENST00000426414 ZCCHC6Q5VYS8 1495 aaKnown RBP13□□□□□ -0.33
WDFY3-203ENST00000426414 AEBP2Q6ZN18 517 aaPredicted RBP12.88□□□□□ -0.35
WDFY3-203ENST00000426414 ABCC9O60706 1549 aa12.82□□□□□ -0.36
WDFY3-203ENST00000426414 MYT1Q01538 1121 aa12.74□□□□□ -0.37
WDFY3-203ENST00000426414 DCAF8L2P0C7V8 631 aa12.72□□□□□ -0.37
WDFY3-203ENST00000426414 DCAF1Q9Y4B6 1507 aa12.72□□□□□ -0.37
WDFY3-203ENST00000426414 SHROOM4Q9ULL8 1493 aa12.65□□□□□ -0.38
WDFY3-203ENST00000426414 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
WDFY3-203ENST00000426414 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
WDFY3-203ENST00000426414 NACADO15069 1562 aa12.5□□□□□ -0.41
WDFY3-203ENST00000426414 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
WDFY3-203ENST00000426414 TTBK1Q5TCY1 1321 aaPredicted RBP12.42□□□□□ -0.42
WDFY3-203ENST00000426414 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
WDFY3-203ENST00000426414 UNC13AQ9UPW8 1703 aa12.38□□□□□ -0.43
WDFY3-203ENST00000426414 PRKCSHP14314 528 aaPredicted RBP12.37□□□□□ -0.43
WDFY3-203ENST00000426414 ERICH6Q7L0X2 663 aa12.28□□□□□ -0.44
WDFY3-203ENST00000426414 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
WDFY3-203ENST00000426414 BICRAQ9NZM4 1560 aa12.2□□□□□ -0.46
WDFY3-203ENST00000426414 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
WDFY3-203ENST00000426414 CECR2Q9BXF3 1484 aa12.11□□□□□ -0.47
WDFY3-203ENST00000426414 PABPN1Q86U42 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
WDFY3-203ENST00000426414 SUPT5HO00267 1087 aaKnown RBP12.07□□□□□ -0.48
WDFY3-203ENST00000426414 APLP2Q06481 763 aa12.07□□□□□ -0.48
WDFY3-203ENST00000426414 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
WDFY3-203ENST00000426414 RSF1Q96T23 1441 aaPredicted RBP12□□□□□ -0.49
WDFY3-203ENST00000426414 WIZO95785 1651 aa11.94□□□□□ -0.5
WDFY3-203ENST00000426414 SMARCA4P51532 1647 aa11.91□□□□□ -0.5
WDFY3-203ENST00000426414 PLPPR3Q6T4P5 718 aa11.9□□□□□ -0.5
WDFY3-203ENST00000426414 BAZ1AQ9NRL2 1556 aaPredicted RBP11.89□□□□□ -0.51
WDFY3-203ENST00000426414 RTN4Q9NQC3 1192 aaKnown RBP11.8□□□□□ -0.52
WDFY3-203ENST00000426414 EIF4G1Q04637 1599 aaKnown RBP11.77□□□□□ -0.53
WDFY3-203ENST00000426414 PEG3Q9GZU2 1588 aa11.75□□□□□ -0.53
WDFY3-203ENST00000426414 NCBP3Q53F19 620 aaKnown RBP11.73□□□□□ -0.53
WDFY3-203ENST00000426414 TOP2AP11388 1531 aaKnown RBP11.71□□□□□ -0.54
WDFY3-203ENST00000426414 PHF23Q9BUL5 403 aaPredicted RBP11.71□□□□□ -0.54
WDFY3-203ENST00000426414 ATAD2BQ9ULI0 1458 aa11.7□□□□□ -0.54
WDFY3-203ENST00000426414 EIF5BO60841 1220 aaKnown RBP11.69□□□□□ -0.54
WDFY3-203ENST00000426414 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
WDFY3-203ENST00000426414 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
WDFY3-203ENST00000426414 CC2D2AQ9P2K1 1620 aa11.62□□□□□ -0.55
WDFY3-203ENST00000426414 BAZ1BQ9UIG0 1483 aaKnown RBP11.59□□□□□ -0.55
WDFY3-203ENST00000426414 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
WDFY3-203ENST00000426414 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
WDFY3-203ENST00000426414 RANGAP1P46060 587 aaPredicted RBP11.52□□□□□ -0.57
WDFY3-203ENST00000426414 DNAJC5BQ9UF47 199 aa11.5□□□□□ -0.57
WDFY3-203ENST00000426414 BCL11AQ9H165 835 aa11.45□□□□□ -0.58
WDFY3-203ENST00000426414 ABCC8Q09428 1581 aa11.44□□□□□ -0.58
WDFY3-203ENST00000426414 TIMELESSQ9UNS1 1208 aa11.4□□□□□ -0.58
WDFY3-203ENST00000426414 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
WDFY3-203ENST00000426414 ARXQ96QS3 562 aa11.36□□□□□ -0.59
WDFY3-203ENST00000426414 CFTRP13569 1480 aa11.33□□□□□ -0.6
WDFY3-203ENST00000426414 NESP48681 1621 aa11.32□□□□□ -0.6
WDFY3-203ENST00000426414 KLHL34Q8N239 644 aa11.31□□□□□ -0.6
WDFY3-203ENST00000426414 SYNJ1O43426 1573 aa11.31□□□□□ -0.6
WDFY3-203ENST00000426414 TULP1O00294 542 aaPredicted RBP11.31□□□□□ -0.6
WDFY3-203ENST00000426414 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
WDFY3-203ENST00000426414 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
WDFY3-203ENST00000426414 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
WDFY3-203ENST00000426414 CADPSQ9ULU8 1353 aa11.26□□□□□ -0.61
WDFY3-203ENST00000426414 WRNQ14191 1432 aaPredicted RBP eCLIP11.23□□□□□ -0.61
WDFY3-203ENST00000426414 CUX1P39880 1505 aa11.22□□□□□ -0.61
WDFY3-203ENST00000426414 RUSC2Q8N2Y8 1516 aa11.2□□□□□ -0.62
WDFY3-203ENST00000426414 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
WDFY3-203ENST00000426414 TOP2BQ02880 1626 aa11.2□□□□□ -0.62
WDFY3-203ENST00000426414 SOGA1O94964 1423 aa11.19□□□□□ -0.62
WDFY3-203ENST00000426414 LOC105371045A0A1W2PR82 267 aa11.18□□□□□ -0.62
WDFY3-203ENST00000426414 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
WDFY3-203ENST00000426414 KIF21AQ7Z4S6 1674 aa11.18□□□□□ -0.62
WDFY3-203ENST00000426414 LAMC3Q9Y6N6 1575 aa11.17□□□□□ -0.62
WDFY3-203ENST00000426414 FAM9AQ8IZU1 332 aaPredicted RBP11.17□□□□□ -0.62
WDFY3-203ENST00000426414 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
WDFY3-203ENST00000426414 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
WDFY3-203ENST00000426414 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
WDFY3-203ENST00000426414 KCNA4P22459 653 aa11.09□□□□□ -0.63
WDFY3-203ENST00000426414 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
WDFY3-203ENST00000426414 TOPBP1Q92547 1522 aa11.06□□□□□ -0.64
WDFY3-203ENST00000426414 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
WDFY3-203ENST00000426414 DNMBPQ6XZF7 1577 aa11.05□□□□□ -0.64
WDFY3-203ENST00000426414 PDS5BQ9NTI5 1447 aa11.02□□□□□ -0.65
WDFY3-203ENST00000426414 RAD54L2Q9Y4B4 1467 aa11.02□□□□□ -0.65
WDFY3-203ENST00000426414 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
WDFY3-203ENST00000426414 WDR97A6NE52 1622 aa11□□□□□ -0.65
WDFY3-203ENST00000426414 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
WDFY3-203ENST00000426414 THOC2Q8NI27 1593 aaKnown RBP10.98□□□□□ -0.65
WDFY3-203ENST00000426414 TARBP1Q13395 1621 aaKnown RBP10.96□□□□□ -0.66
WDFY3-203ENST00000426414 TPRNQ4KMQ1 711 aa10.96□□□□□ -0.66
WDFY3-203ENST00000426414 CSRNP3Q8WYN3 585 aa10.96□□□□□ -0.66
WDFY3-203ENST00000426414 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
WDFY3-203ENST00000426414 WDR62O43379 1518 aa10.94□□□□□ -0.66
WDFY3-203ENST00000426414 CUX2O14529 1486 aa10.94□□□□□ -0.66
WDFY3-203ENST00000426414 RAPGEF2Q9Y4G8 1499 aa10.94□□□□□ -0.66
WDFY3-203ENST00000426414 EEA1Q15075 1411 aa10.94□□□□□ -0.66
WDFY3-203ENST00000426414 KIF21BO75037 1637 aa10.93□□□□□ -0.66
WDFY3-203ENST00000426414 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
WDFY3-203ENST00000426414 PRXQ9BXM0 1461 aa10.91□□□□□ -0.66
WDFY3-203ENST00000426414 ABCA5Q8WWZ7 1642 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms