RNA–Protein interactions for RNA: ENST00000539387.5

NDUFC1-210, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFC1, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-210ENST00000539387 NISCHQ9Y2I1 1504 aa35.73■■■■□ 3.31
NDUFC1-210ENST00000539387 CCDC180Q9P1Z9 1646 aa31.63■■■□□ 2.65
NDUFC1-210ENST00000539387 ABCC9O60706 1549 aa30.88■■■□□ 2.53
NDUFC1-210ENST00000539387 AEBP2Q6ZN18 517 aaPredicted RBP30.67■■■□□ 2.5
NDUFC1-210ENST00000539387 CHIC1Q5VXU3 224 aa29.95■■■□□ 2.39
NDUFC1-210ENST00000539387 DCAF8L2P0C7V8 631 aa29.94■■■□□ 2.38
NDUFC1-210ENST00000539387 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
NDUFC1-210ENST00000539387 RB1CC1Q8TDY2 1594 aa29.73■■■□□ 2.35
NDUFC1-210ENST00000539387 NACADO15069 1562 aa29.72■■■□□ 2.35
NDUFC1-210ENST00000539387 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
NDUFC1-210ENST00000539387 DCAF1Q9Y4B6 1507 aa29.52■■■□□ 2.32
NDUFC1-210ENST00000539387 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
NDUFC1-210ENST00000539387 SCRIBQ14160 1630 aa28.98■■■□□ 2.23
NDUFC1-210ENST00000539387 PABPN1Q86U42 306 aaKnown RBP eCLIP28.93■■■□□ 2.22
NDUFC1-210ENST00000539387 BICRAQ9NZM4 1560 aa28.8■■■□□ 2.2
NDUFC1-210ENST00000539387 SHROOM4Q9ULL8 1493 aa28.48■■■□□ 2.15
NDUFC1-210ENST00000539387 DNAJC5BQ9UF47 199 aa28.16■■■□□ 2.1
NDUFC1-210ENST00000539387 EIF4G1Q04637 1599 aaKnown RBP28.05■■■□□ 2.08
NDUFC1-210ENST00000539387 CC2D2AQ9P2K1 1620 aa27.89■■■□□ 2.06
NDUFC1-210ENST00000539387 CECR2Q9BXF3 1484 aa27.85■■■□□ 2.05
NDUFC1-210ENST00000539387 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
NDUFC1-210ENST00000539387 BAZ1AQ9NRL2 1556 aaPredicted RBP27.68■■■□□ 2.02
NDUFC1-210ENST00000539387 MROH2BQ7Z745 1585 aa27.57■■■□□ 2
NDUFC1-210ENST00000539387 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
NDUFC1-210ENST00000539387 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
NDUFC1-210ENST00000539387 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
NDUFC1-210ENST00000539387 PEG3Q9GZU2 1588 aa27.36■■□□□ 1.97
NDUFC1-210ENST00000539387 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.96
NDUFC1-210ENST00000539387 BAZ1BQ9UIG0 1483 aaKnown RBP27.31■■□□□ 1.96
NDUFC1-210ENST00000539387 HMGXB3Q12766 1538 aa27.3■■□□□ 1.96
NDUFC1-210ENST00000539387 WIZO95785 1651 aa27.28■■□□□ 1.96
NDUFC1-210ENST00000539387 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
NDUFC1-210ENST00000539387 SUPT5HO00267 1087 aaKnown RBP26.9■■□□□ 1.9
NDUFC1-210ENST00000539387 NESP48681 1621 aa26.76■■□□□ 1.87
NDUFC1-210ENST00000539387 CCDC88BA6NC98 1476 aa26.69■■□□□ 1.86
NDUFC1-210ENST00000539387 CADPSQ9ULU8 1353 aa26.68■■□□□ 1.86
NDUFC1-210ENST00000539387 LAMC3Q9Y6N6 1575 aa26.67■■□□□ 1.86
NDUFC1-210ENST00000539387 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
NDUFC1-210ENST00000539387 CFTRP13569 1480 aa26.54■■□□□ 1.84
NDUFC1-210ENST00000539387 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
NDUFC1-210ENST00000539387 KIF21AQ7Z4S6 1674 aa26.41■■□□□ 1.82
NDUFC1-210ENST00000539387 FANCD2Q9BXW9 1451 aa26.38■■□□□ 1.81
NDUFC1-210ENST00000539387 PHF23Q9BUL5 403 aaPredicted RBP26.38■■□□□ 1.81
NDUFC1-210ENST00000539387 CEP164Q9UPV0 1460 aa26.33■■□□□ 1.81
NDUFC1-210ENST00000539387 PRDM2Q13029 1718 aa26.3■■□□□ 1.8
NDUFC1-210ENST00000539387 THOC2Q8NI27 1593 aaKnown RBP26.26■■□□□ 1.79
NDUFC1-210ENST00000539387 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
NDUFC1-210ENST00000539387 CUX2O14529 1486 aa26.18■■□□□ 1.78
NDUFC1-210ENST00000539387 WDR62O43379 1518 aa26.11■■□□□ 1.77
NDUFC1-210ENST00000539387 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
NDUFC1-210ENST00000539387 SENP3Q9H4L4 574 aaPredicted RBP25.97■■□□□ 1.75
NDUFC1-210ENST00000539387 TOPBP1Q92547 1522 aa25.97■■□□□ 1.75
NDUFC1-210ENST00000539387 ABCC8Q09428 1581 aa25.95■■□□□ 1.75
NDUFC1-210ENST00000539387 DNMBPQ6XZF7 1577 aa25.94■■□□□ 1.74
NDUFC1-210ENST00000539387 CUX1P39880 1505 aa25.85■■□□□ 1.73
NDUFC1-210ENST00000539387 WRNQ14191 1432 aaPredicted RBP eCLIP25.78■■□□□ 1.72
NDUFC1-210ENST00000539387 POLA1P09884 1462 aaPredicted RBP25.76■■□□□ 1.71
NDUFC1-210ENST00000539387 IFT140Q96RY7 1462 aa25.75■■□□□ 1.71
NDUFC1-210ENST00000539387 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
NDUFC1-210ENST00000539387 SOGA1O94964 1423 aa25.69■■□□□ 1.7
NDUFC1-210ENST00000539387 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
NDUFC1-210ENST00000539387 RAD54L2Q9Y4B4 1467 aa25.68■■□□□ 1.7
NDUFC1-210ENST00000539387 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
NDUFC1-210ENST00000539387 ZNF608Q9ULD9 1512 aaPredicted RBP25.64■■□□□ 1.7
NDUFC1-210ENST00000539387 TARBP1Q13395 1621 aaKnown RBP25.64■■□□□ 1.7
NDUFC1-210ENST00000539387 BIVM-ERCC5R4GMW8 1640 aa25.63■■□□□ 1.69
NDUFC1-210ENST00000539387 TDRD9Q8NDG6 1382 aaKnown RBP25.54■■□□□ 1.68
NDUFC1-210ENST00000539387 AQRO60306 1485 aaKnown RBP eCLIP25.53■■□□□ 1.68
NDUFC1-210ENST00000539387 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
NDUFC1-210ENST00000539387 ABCA10Q8WWZ4 1543 aa25.47■■□□□ 1.67
NDUFC1-210ENST00000539387 WDR97A6NE52 1622 aa25.45■■□□□ 1.67
NDUFC1-210ENST00000539387 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
NDUFC1-210ENST00000539387 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
NDUFC1-210ENST00000539387 ABCA5Q8WWZ7 1642 aa25.34■■□□□ 1.65
NDUFC1-210ENST00000539387 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
NDUFC1-210ENST00000539387 SNAPC4Q5SXM2 1469 aa25.3■■□□□ 1.64
NDUFC1-210ENST00000539387 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
NDUFC1-210ENST00000539387 FBLN2P98095 1184 aa25.27■■□□□ 1.64
NDUFC1-210ENST00000539387 MAGI1Q96QZ7 1491 aaPredicted RBP25.23■■□□□ 1.63
NDUFC1-210ENST00000539387 KIF27Q86VH2 1401 aa25.22■■□□□ 1.63
NDUFC1-210ENST00000539387 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
NDUFC1-210ENST00000539387 CHMP7Q8WUX9 453 aaPredicted RBP25.18■■□□□ 1.62
NDUFC1-210ENST00000539387 DNAJC5Q9H3Z4 198 aa25.18■■□□□ 1.62
NDUFC1-210ENST00000539387 ERICH3Q5RHP9 1530 aa25.17■■□□□ 1.62
NDUFC1-210ENST00000539387 CHD1O14646 1710 aa25.15■■□□□ 1.62
NDUFC1-210ENST00000539387 SYNJ2O15056 1496 aa25.15■■□□□ 1.62
NDUFC1-210ENST00000539387 ADAMTS12P58397 1594 aa25.1■■□□□ 1.61
NDUFC1-210ENST00000539387 IGF1RP08069 1367 aa25.09■■□□□ 1.61
NDUFC1-210ENST00000539387 FHAD1B1AJZ9 1412 aa25.09■■□□□ 1.61
NDUFC1-210ENST00000539387 RUSC2Q8N2Y8 1516 aa25.07■■□□□ 1.6
NDUFC1-210ENST00000539387 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
NDUFC1-210ENST00000539387 CUL7Q14999 1698 aa24.97■■□□□ 1.59
NDUFC1-210ENST00000539387 CARMIL1Q5VZK9 1371 aa24.96■■□□□ 1.59
NDUFC1-210ENST00000539387 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
NDUFC1-210ENST00000539387 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
NDUFC1-210ENST00000539387 NUP160Q12769 1436 aa24.87■■□□□ 1.57
NDUFC1-210ENST00000539387 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
NDUFC1-210ENST00000539387 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
NDUFC1-210ENST00000539387 EEA1Q15075 1411 aa24.84■■□□□ 1.57
NDUFC1-210ENST00000539387 RAPGEF2Q9Y4G8 1499 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms