RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
FANCA-232ENST00000568983 ABCC9O60706 1549 aa27.57■■■□□ 2
FANCA-232ENST00000568983 CCDC180Q9P1Z9 1646 aa27.4■■□□□ 1.98
FANCA-232ENST00000568983 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
FANCA-232ENST00000568983 NACADO15069 1562 aa25.91■■□□□ 1.74
FANCA-232ENST00000568983 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
FANCA-232ENST00000568983 DCAF8L2P0C7V8 631 aa25.81■■□□□ 1.72
FANCA-232ENST00000568983 PABPN1Q86U42 306 aaKnown RBP eCLIP25.6■■□□□ 1.699e-9■■■■□ 24.6
FANCA-232ENST00000568983 UNC13AQ9UPW8 1703 aa25.57■■□□□ 1.68
FANCA-232ENST00000568983 MYO15BQ96JP2 1530 aa25.44■■□□□ 1.66
FANCA-232ENST00000568983 BICRAQ9NZM4 1560 aa25.34■■□□□ 1.65
FANCA-232ENST00000568983 ZCCHC6Q5VYS8 1495 aaKnown RBP25.16■■□□□ 1.62
FANCA-232ENST00000568983 DCAF1Q9Y4B6 1507 aa25.07■■□□□ 1.6
FANCA-232ENST00000568983 SHROOM4Q9ULL8 1493 aa25.02■■□□□ 1.6
FANCA-232ENST00000568983 SCRIBQ14160 1630 aa25■■□□□ 1.59
FANCA-232ENST00000568983 CC2D2AQ9P2K1 1620 aa24.89■■□□□ 1.57
FANCA-232ENST00000568983 CECR2Q9BXF3 1484 aa24.84■■□□□ 1.57
FANCA-232ENST00000568983 EIF4G1Q04637 1599 aaKnown RBP24.79■■□□□ 1.56
FANCA-232ENST00000568983 DNAJC5Q9H3Z4 198 aa23.91■■□□□ 1.42
FANCA-232ENST00000568983 NCAPD3P42695 1498 aa23.87■■□□□ 1.41
FANCA-232ENST00000568983 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
FANCA-232ENST00000568983 CUX2O14529 1486 aa23.81■■□□□ 1.4
FANCA-232ENST00000568983 ATAD2BQ9ULI0 1458 aa23.8■■□□□ 1.4
FANCA-232ENST00000568983 SMARCA2P51531 1590 aa23.78■■□□□ 1.4
FANCA-232ENST00000568983 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
FANCA-232ENST00000568983 HMGXB3Q12766 1538 aa23.74■■□□□ 1.39
FANCA-232ENST00000568983 BAZ1AQ9NRL2 1556 aaPredicted RBP23.65■■□□□ 1.38
FANCA-232ENST00000568983 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
FANCA-232ENST00000568983 NESP48681 1621 aa23.6■■□□□ 1.37
FANCA-232ENST00000568983 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
FANCA-232ENST00000568983 LAMC3Q9Y6N6 1575 aa23.44■■□□□ 1.34
FANCA-232ENST00000568983 THOC2Q8NI27 1593 aaKnown RBP23.43■■□□□ 1.34
FANCA-232ENST00000568983 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
FANCA-232ENST00000568983 KIF21AQ7Z4S6 1674 aa23.35■■□□□ 1.33
FANCA-232ENST00000568983 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
FANCA-232ENST00000568983 WIZO95785 1651 aa23.16■■□□□ 1.3
FANCA-232ENST00000568983 CADPSQ9ULU8 1353 aa23.15■■□□□ 1.3
FANCA-232ENST00000568983 MRC2Q9UBG0 1479 aa23.12■■□□□ 1.29
FANCA-232ENST00000568983 WDR62O43379 1518 aa23.05■■□□□ 1.28
FANCA-232ENST00000568983 CEP164Q9UPV0 1460 aa23.02■■□□□ 1.28
FANCA-232ENST00000568983 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
FANCA-232ENST00000568983 TRIM41Q8WV44 630 aa22.93■■□□□ 1.26
FANCA-232ENST00000568983 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
FANCA-232ENST00000568983 CFTRP13569 1480 aa22.86■■□□□ 1.25
FANCA-232ENST00000568983 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
FANCA-232ENST00000568983 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
FANCA-232ENST00000568983 PRDM2Q13029 1718 aa22.72■■□□□ 1.23
FANCA-232ENST00000568983 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
FANCA-232ENST00000568983 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
FANCA-232ENST00000568983 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
FANCA-232ENST00000568983 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
FANCA-232ENST00000568983 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
FANCA-232ENST00000568983 RIMBP3CA6NJZ7 1639 aa22.45■■□□□ 1.18
FANCA-232ENST00000568983 RIMBP3BA6NNM3 1639 aa22.45■■□□□ 1.18
FANCA-232ENST00000568983 RIMBP3Q9UFD9 1639 aa22.45■■□□□ 1.18
FANCA-232ENST00000568983 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
FANCA-232ENST00000568983 ABCC8Q09428 1581 aa22.42■■□□□ 1.18
FANCA-232ENST00000568983 DNMBPQ6XZF7 1577 aa22.41■■□□□ 1.18
FANCA-232ENST00000568983 ARHGEF11O15085 1522 aa22.35■■□□□ 1.17
FANCA-232ENST00000568983 CHD1O14646 1710 aa22.3■■□□□ 1.16
FANCA-232ENST00000568983 TARBP1Q13395 1621 aaKnown RBP22.28■■□□□ 1.16
FANCA-232ENST00000568983 AQRO60306 1485 aaKnown RBP eCLIP22.27■■□□□ 1.162e-9■■■■■ 39.4
FANCA-232ENST00000568983 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
FANCA-232ENST00000568983 FBLN2P98095 1184 aa22.23■■□□□ 1.15
FANCA-232ENST00000568983 CYB5RLQ6IPT4 315 aa22.18■■□□□ 1.14
FANCA-232ENST00000568983 RAD54L2Q9Y4B4 1467 aa22.15■■□□□ 1.14
FANCA-232ENST00000568983 SOGA1O94964 1423 aa22.13■■□□□ 1.13
FANCA-232ENST00000568983 TDRD9Q8NDG6 1382 aaKnown RBP22.11■■□□□ 1.13
FANCA-232ENST00000568983 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
FANCA-232ENST00000568983 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
FANCA-232ENST00000568983 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.12
FANCA-232ENST00000568983 WDR97A6NE52 1622 aa22.07■■□□□ 1.12
FANCA-232ENST00000568983 TRHP20396 242 aaPredicted RBP22.06■■□□□ 1.12
FANCA-232ENST00000568983 CUX1P39880 1505 aa22.02■■□□□ 1.12
FANCA-232ENST00000568983 SYNJ1O43426 1573 aa22■■□□□ 1.11
FANCA-232ENST00000568983 CHMP7Q8WUX9 453 aaPredicted RBP22■■□□□ 1.11
FANCA-232ENST00000568983 MAGI1Q96QZ7 1491 aaPredicted RBP21.99■■□□□ 1.11
FANCA-232ENST00000568983 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
FANCA-232ENST00000568983 CLASP1Q7Z460 1538 aa21.97■■□□□ 1.11
FANCA-232ENST00000568983 PBRM1Q86U86 1689 aa21.94■■□□□ 1.1
FANCA-232ENST00000568983 SYNJ2O15056 1496 aa21.92■■□□□ 1.1
FANCA-232ENST00000568983 GAPVD1Q14C86 1478 aa21.88■■□□□ 1.09
FANCA-232ENST00000568983 ABCA5Q8WWZ7 1642 aa21.82■■□□□ 1.08
FANCA-232ENST00000568983 ABCA10Q8WWZ4 1543 aa21.8■■□□□ 1.08
FANCA-232ENST00000568983 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
FANCA-232ENST00000568983 WRNQ14191 1432 aaPredicted RBP eCLIP21.71■■□□□ 1.07
FANCA-232ENST00000568983 GRIN2AQ12879 1464 aa21.7■■□□□ 1.06
FANCA-232ENST00000568983 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
FANCA-232ENST00000568983 BIVM-ERCC5R4GMW8 1640 aa21.66■■□□□ 1.06
FANCA-232ENST00000568983 TOP2BQ02880 1626 aa21.65■■□□□ 1.06
FANCA-232ENST00000568983 CEP170Q5SW79 1584 aa21.62■■□□□ 1.05
FANCA-232ENST00000568983 ERCC6L2Q5T890 1561 aa21.61■■□□□ 1.05
FANCA-232ENST00000568983 NUP160Q12769 1436 aa21.59■■□□□ 1.05
FANCA-232ENST00000568983 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
FANCA-232ENST00000568983 AEBP2Q6ZN18 517 aaPredicted RBP21.57■■□□□ 1.04
FANCA-232ENST00000568983 ERICH3Q5RHP9 1530 aa21.55■■□□□ 1.04
FANCA-232ENST00000568983 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
FANCA-232ENST00000568983 PRG4Q92954 1404 aaPredicted RBP21.44■■□□□ 1.02
FANCA-232ENST00000568983 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
FANCA-232ENST00000568983 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms