Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC33.23■■■□□ 2.91
SNCAIPQ9Y6H5 AP006261.1-201ENST00000584783 668 ntBASIC33.22■■■□□ 2.91
SNCAIPQ9Y6H5 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
SNCAIPQ9Y6H5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC33.19■■■□□ 2.9
SNCAIPQ9Y6H5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC33.19■■■□□ 2.9
SNCAIPQ9Y6H5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
SNCAIPQ9Y6H5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
SNCAIPQ9Y6H5 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC33.14■■■□□ 2.9
SNCAIPQ9Y6H5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC33.14■■■□□ 2.9
SNCAIPQ9Y6H5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SNCAIPQ9Y6H5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
SNCAIPQ9Y6H5 HNRNPLP2-201ENST00000568980 1570 ntBASIC33.09■■■□□ 2.89
SNCAIPQ9Y6H5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SNCAIPQ9Y6H5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
SNCAIPQ9Y6H5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
SNCAIPQ9Y6H5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC33.01■■■□□ 2.87
SNCAIPQ9Y6H5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC33.01■■■□□ 2.87
SNCAIPQ9Y6H5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC33.01■■■□□ 2.87
SNCAIPQ9Y6H5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.98■■■□□ 2.87
SNCAIPQ9Y6H5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.97■■■□□ 2.87
SNCAIPQ9Y6H5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
SNCAIPQ9Y6H5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC32.96■■■□□ 2.87
SNCAIPQ9Y6H5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.93■■■□□ 2.86
SNCAIPQ9Y6H5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.92■■■□□ 2.86
SNCAIPQ9Y6H5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.91■■■□□ 2.86
SNCAIPQ9Y6H5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC32.91■■■□□ 2.86
SNCAIPQ9Y6H5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
SNCAIPQ9Y6H5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC32.9■■■□□ 2.86
SNCAIPQ9Y6H5 MIR3665-201ENST00000578708 105 ntBASIC32.88■■■□□ 2.85
SNCAIPQ9Y6H5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC32.87■■■□□ 2.85
SNCAIPQ9Y6H5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SNCAIPQ9Y6H5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SNCAIPQ9Y6H5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC32.85■■■□□ 2.85
SNCAIPQ9Y6H5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNCAIPQ9Y6H5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC32.84■■■□□ 2.85
SNCAIPQ9Y6H5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNCAIPQ9Y6H5 DUX4L28-201ENST00000623687 678 ntBASIC32.82■■■□□ 2.84
SNCAIPQ9Y6H5 AC087741.3-201ENST00000624270 1347 ntBASIC32.81■■■□□ 2.84
SNCAIPQ9Y6H5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNCAIPQ9Y6H5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SNCAIPQ9Y6H5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNCAIPQ9Y6H5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC32.78■■■□□ 2.84
SNCAIPQ9Y6H5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNCAIPQ9Y6H5 ABHD17AP4-201ENST00000411545 909 ntBASIC32.78■■■□□ 2.84
SNCAIPQ9Y6H5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNCAIPQ9Y6H5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
SNCAIPQ9Y6H5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SNCAIPQ9Y6H5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC32.76■■■□□ 2.83
SNCAIPQ9Y6H5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
SNCAIPQ9Y6H5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SNCAIPQ9Y6H5 MIR7108-201ENST00000614319 87 ntBASIC32.74■■■□□ 2.83
SNCAIPQ9Y6H5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
SNCAIPQ9Y6H5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SNCAIPQ9Y6H5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.73■■■□□ 2.83
SNCAIPQ9Y6H5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
SNCAIPQ9Y6H5 MIR762-201ENST00000390236 83 ntBASIC32.72■■■□□ 2.83
SNCAIPQ9Y6H5 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.72■■■□□ 2.83
SNCAIPQ9Y6H5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
SNCAIPQ9Y6H5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
SNCAIPQ9Y6H5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC32.68■■■□□ 2.82
SNCAIPQ9Y6H5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNCAIPQ9Y6H5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNCAIPQ9Y6H5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNCAIPQ9Y6H5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNCAIPQ9Y6H5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.65■■■□□ 2.82
SNCAIPQ9Y6H5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC32.65■■■□□ 2.82
SNCAIPQ9Y6H5 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC32.64■■■□□ 2.82
SNCAIPQ9Y6H5 AC005559.1-201ENST00000589661 871 ntBASIC32.63■■■□□ 2.81
SNCAIPQ9Y6H5 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC32.61■■■□□ 2.81
SNCAIPQ9Y6H5 AC044849.2-201ENST00000606596 710 ntBASIC32.61■■■□□ 2.81
SNCAIPQ9Y6H5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
SNCAIPQ9Y6H5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SNCAIPQ9Y6H5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC32.59■■■□□ 2.81
SNCAIPQ9Y6H5 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.59■■■□□ 2.81
SNCAIPQ9Y6H5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SNCAIPQ9Y6H5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC32.57■■■□□ 2.8
SNCAIPQ9Y6H5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.57■■■□□ 2.8
SNCAIPQ9Y6H5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SNCAIPQ9Y6H5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
SNCAIPQ9Y6H5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SNCAIPQ9Y6H5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC32.53■■■□□ 2.8
SNCAIPQ9Y6H5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC32.51■■■□□ 2.79
SNCAIPQ9Y6H5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC32.5■■■□□ 2.79
SNCAIPQ9Y6H5 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC32.48■■■□□ 2.79
SNCAIPQ9Y6H5 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC32.48■■■□□ 2.79
SNCAIPQ9Y6H5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SNCAIPQ9Y6H5 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC32.47■■■□□ 2.79
SNCAIPQ9Y6H5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.45■■■□□ 2.79
SNCAIPQ9Y6H5 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC32.44■■■□□ 2.78
SNCAIPQ9Y6H5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
SNCAIPQ9Y6H5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.43■■■□□ 2.78
SNCAIPQ9Y6H5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC32.43■■■□□ 2.78
SNCAIPQ9Y6H5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC32.41■■■□□ 2.78
SNCAIPQ9Y6H5 HLA-V-202ENST00000446817 847 ntBASIC32.39■■■□□ 2.78
SNCAIPQ9Y6H5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SNCAIPQ9Y6H5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.38■■■□□ 2.77
SNCAIPQ9Y6H5 WASH5P-204ENST00000632292 975 ntBASIC32.36■■■□□ 2.77
SNCAIPQ9Y6H5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
SNCAIPQ9Y6H5 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC32.34■■■□□ 2.77
SNCAIPQ9Y6H5 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC32.34■■■□□ 2.77
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms