Protein–RNA interactions for Protein: Q9Y4B5

MTCL1, Microtubule cross-linking factor 1, humanhuman

Known RBP Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1Q9Y4B5 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
MTCL1Q9Y4B5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
MTCL1Q9Y4B5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.67■■■□□ 2.34
MTCL1Q9Y4B5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.66■■■□□ 2.34
MTCL1Q9Y4B5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
MTCL1Q9Y4B5 CAHM-201ENST00000604200 896 ntBASIC29.65■■■□□ 2.34
MTCL1Q9Y4B5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
MTCL1Q9Y4B5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.62■■■□□ 2.33
MTCL1Q9Y4B5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.62■■■□□ 2.33
MTCL1Q9Y4B5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
MTCL1Q9Y4B5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
MTCL1Q9Y4B5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC29.55■■■□□ 2.32
MTCL1Q9Y4B5 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
MTCL1Q9Y4B5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
MTCL1Q9Y4B5 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
MTCL1Q9Y4B5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.5■■■□□ 2.31
MTCL1Q9Y4B5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.49■■■□□ 2.31
MTCL1Q9Y4B5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
MTCL1Q9Y4B5 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.47■■■□□ 2.31
MTCL1Q9Y4B5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.46■■■□□ 2.31
MTCL1Q9Y4B5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.45■■■□□ 2.3
MTCL1Q9Y4B5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
MTCL1Q9Y4B5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
MTCL1Q9Y4B5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
MTCL1Q9Y4B5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.41■■■□□ 2.3
MTCL1Q9Y4B5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.4■■■□□ 2.3
MTCL1Q9Y4B5 AP006261.1-201ENST00000584783 668 ntBASIC29.39■■■□□ 2.3
MTCL1Q9Y4B5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
MTCL1Q9Y4B5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
MTCL1Q9Y4B5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.37■■■□□ 2.29
MTCL1Q9Y4B5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.35■■■□□ 2.29
MTCL1Q9Y4B5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
MTCL1Q9Y4B5 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
MTCL1Q9Y4B5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.35■■■□□ 2.29
MTCL1Q9Y4B5 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
MTCL1Q9Y4B5 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
MTCL1Q9Y4B5 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
MTCL1Q9Y4B5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
MTCL1Q9Y4B5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MTCL1Q9Y4B5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MTCL1Q9Y4B5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
MTCL1Q9Y4B5 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
MTCL1Q9Y4B5 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC29.29■■■□□ 2.28
MTCL1Q9Y4B5 DUX4L28-201ENST00000623687 678 ntBASIC29.28■■■□□ 2.28
MTCL1Q9Y4B5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
MTCL1Q9Y4B5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
MTCL1Q9Y4B5 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC29.26■■■□□ 2.27
MTCL1Q9Y4B5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC29.26■■■□□ 2.27
MTCL1Q9Y4B5 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC29.26■■■□□ 2.27
MTCL1Q9Y4B5 MIR3665-201ENST00000578708 105 ntBASIC29.26■■■□□ 2.27
MTCL1Q9Y4B5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC29.24■■■□□ 2.27
MTCL1Q9Y4B5 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC29.24■■■□□ 2.27
MTCL1Q9Y4B5 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
MTCL1Q9Y4B5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
MTCL1Q9Y4B5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
MTCL1Q9Y4B5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC29.21■■■□□ 2.27
MTCL1Q9Y4B5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
MTCL1Q9Y4B5 AC044849.2-201ENST00000606596 710 ntBASIC29.21■■■□□ 2.27
MTCL1Q9Y4B5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
MTCL1Q9Y4B5 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
MTCL1Q9Y4B5 AC005559.1-201ENST00000589661 871 ntBASIC29.19■■■□□ 2.26
MTCL1Q9Y4B5 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
MTCL1Q9Y4B5 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC29.18■■■□□ 2.26
MTCL1Q9Y4B5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
MTCL1Q9Y4B5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
MTCL1Q9Y4B5 AC087741.3-201ENST00000624270 1347 ntBASIC29.13■■■□□ 2.25
MTCL1Q9Y4B5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC29.12■■■□□ 2.25
MTCL1Q9Y4B5 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
MTCL1Q9Y4B5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.12■■■□□ 2.25
MTCL1Q9Y4B5 CHML-205ENST00000638160 705 ntTSL 3 BASIC29.11■■■□□ 2.25
MTCL1Q9Y4B5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
MTCL1Q9Y4B5 MIR762-201ENST00000390236 83 ntBASIC29.1■■■□□ 2.25
MTCL1Q9Y4B5 MLEC-202ENST00000412616 841 ntTSL 3 BASIC29.1■■■□□ 2.25
MTCL1Q9Y4B5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.09■■■□□ 2.25
MTCL1Q9Y4B5 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
MTCL1Q9Y4B5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
MTCL1Q9Y4B5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
MTCL1Q9Y4B5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
MTCL1Q9Y4B5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
MTCL1Q9Y4B5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC29.05■■■□□ 2.24
MTCL1Q9Y4B5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC29.04■■■□□ 2.24
MTCL1Q9Y4B5 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
MTCL1Q9Y4B5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.01■■■□□ 2.23
MTCL1Q9Y4B5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC29.01■■■□□ 2.23
MTCL1Q9Y4B5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29■■■□□ 2.23
MTCL1Q9Y4B5 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
MTCL1Q9Y4B5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
MTCL1Q9Y4B5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
MTCL1Q9Y4B5 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
MTCL1Q9Y4B5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
MTCL1Q9Y4B5 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC28.97■■■□□ 2.23
MTCL1Q9Y4B5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.97■■■□□ 2.23
MTCL1Q9Y4B5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
MTCL1Q9Y4B5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
MTCL1Q9Y4B5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
MTCL1Q9Y4B5 ABHD17AP4-201ENST00000411545 909 ntBASIC28.95■■■□□ 2.23
MTCL1Q9Y4B5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.95■■■□□ 2.23
MTCL1Q9Y4B5 WASH5P-204ENST00000632292 975 ntBASIC28.95■■■□□ 2.23
MTCL1Q9Y4B5 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
MTCL1Q9Y4B5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms