Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGB4Q9UN71 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGB4Q9UN71 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.65■■□□□ 1.86
PCDHGB4Q9UN71 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGB4Q9UN71 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGB4Q9UN71 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.64■■□□□ 1.86
PCDHGB4Q9UN71 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHGB4Q9UN71 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGB4Q9UN71 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGB4Q9UN71 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGB4Q9UN71 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGB4Q9UN71 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGB4Q9UN71 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGB4Q9UN71 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
PCDHGB4Q9UN71 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGB4Q9UN71 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGB4Q9UN71 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHGB4Q9UN71 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHGB4Q9UN71 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PCDHGB4Q9UN71 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGB4Q9UN71 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC26.5■■□□□ 1.83
PCDHGB4Q9UN71 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGB4Q9UN71 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.48■■□□□ 1.83
PCDHGB4Q9UN71 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC26.48■■□□□ 1.83
PCDHGB4Q9UN71 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PCDHGB4Q9UN71 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGB4Q9UN71 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.47■■□□□ 1.83
PCDHGB4Q9UN71 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
PCDHGB4Q9UN71 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGB4Q9UN71 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PCDHGB4Q9UN71 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
PCDHGB4Q9UN71 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
PCDHGB4Q9UN71 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGB4Q9UN71 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
PCDHGB4Q9UN71 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PCDHGB4Q9UN71 ZNRF2P1-201ENST00000441407 443 ntBASIC26.42■■□□□ 1.82
PCDHGB4Q9UN71 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.41■■□□□ 1.82
PCDHGB4Q9UN71 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
PCDHGB4Q9UN71 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGB4Q9UN71 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
PCDHGB4Q9UN71 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGB4Q9UN71 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHGB4Q9UN71 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGB4Q9UN71 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGB4Q9UN71 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PCDHGB4Q9UN71 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
PCDHGB4Q9UN71 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
PCDHGB4Q9UN71 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.34■■□□□ 1.81
PCDHGB4Q9UN71 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PCDHGB4Q9UN71 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGB4Q9UN71 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.32■■□□□ 1.8
PCDHGB4Q9UN71 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.32■■□□□ 1.8
PCDHGB4Q9UN71 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGB4Q9UN71 ABCB10P1-201ENST00000614297 2181 ntBASIC26.31■■□□□ 1.8
PCDHGB4Q9UN71 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.3■■□□□ 1.8
PCDHGB4Q9UN71 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGB4Q9UN71 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGB4Q9UN71 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGB4Q9UN71 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGB4Q9UN71 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PCDHGB4Q9UN71 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.27■■□□□ 1.8
PCDHGB4Q9UN71 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGB4Q9UN71 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGB4Q9UN71 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHGB4Q9UN71 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.25■■□□□ 1.79
PCDHGB4Q9UN71 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGB4Q9UN71 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PCDHGB4Q9UN71 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
PCDHGB4Q9UN71 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PCDHGB4Q9UN71 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
PCDHGB4Q9UN71 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
PCDHGB4Q9UN71 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
PCDHGB4Q9UN71 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGB4Q9UN71 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHGB4Q9UN71 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC26.21■■□□□ 1.79
PCDHGB4Q9UN71 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGB4Q9UN71 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.2■■□□□ 1.78
PCDHGB4Q9UN71 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGB4Q9UN71 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC26.19■■□□□ 1.78
PCDHGB4Q9UN71 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.19■■□□□ 1.78
PCDHGB4Q9UN71 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGB4Q9UN71 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGB4Q9UN71 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
PCDHGB4Q9UN71 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
PCDHGB4Q9UN71 ABCB10P3-201ENST00000561950 2166 ntBASIC26.16■■□□□ 1.78
PCDHGB4Q9UN71 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB4Q9UN71 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB4Q9UN71 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PCDHGB4Q9UN71 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
PCDHGB4Q9UN71 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
PCDHGB4Q9UN71 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.14■■□□□ 1.78
PCDHGB4Q9UN71 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PCDHGB4Q9UN71 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
PCDHGB4Q9UN71 AL161658.1-201ENST00000623641 1967 ntBASIC26.13■■□□□ 1.77
PCDHGB4Q9UN71 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGB4Q9UN71 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.12■■□□□ 1.77
PCDHGB4Q9UN71 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGB4Q9UN71 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGB4Q9UN71 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGB4Q9UN71 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 9.5 ms