Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC28.32■■■□□ 2.12
NCDNQ9UBB6 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
NCDNQ9UBB6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
NCDNQ9UBB6 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
NCDNQ9UBB6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC28.27■■■□□ 2.12
NCDNQ9UBB6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.27■■■□□ 2.12
NCDNQ9UBB6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC28.26■■■□□ 2.11
NCDNQ9UBB6 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
NCDNQ9UBB6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
NCDNQ9UBB6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
NCDNQ9UBB6 MVK-208ENST00000539696 608 ntTSL 5 BASIC28.23■■■□□ 2.11
NCDNQ9UBB6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.22■■■□□ 2.11
NCDNQ9UBB6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.2■■■□□ 2.1
NCDNQ9UBB6 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NCDNQ9UBB6 AC087741.3-201ENST00000624270 1347 ntBASIC28.18■■■□□ 2.1
NCDNQ9UBB6 EBPL-202ENST00000378268 680 ntTSL 3 BASIC28.18■■■□□ 2.1
NCDNQ9UBB6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
NCDNQ9UBB6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
NCDNQ9UBB6 AC044849.2-201ENST00000606596 710 ntBASIC28.17■■■□□ 2.1
NCDNQ9UBB6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NCDNQ9UBB6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
NCDNQ9UBB6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NCDNQ9UBB6 AL133380.1-201ENST00000506013 324 ntBASIC28.15■■■□□ 2.1
NCDNQ9UBB6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
NCDNQ9UBB6 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NCDNQ9UBB6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC28.13■■■□□ 2.09
NCDNQ9UBB6 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
NCDNQ9UBB6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NCDNQ9UBB6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.11■■■□□ 2.09
NCDNQ9UBB6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.11■■■□□ 2.09
NCDNQ9UBB6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
NCDNQ9UBB6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
NCDNQ9UBB6 DUX4L28-201ENST00000623687 678 ntBASIC28.08■■■□□ 2.09
NCDNQ9UBB6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
NCDNQ9UBB6 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NCDNQ9UBB6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
NCDNQ9UBB6 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
NCDNQ9UBB6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.04■■■□□ 2.08
NCDNQ9UBB6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.04■■■□□ 2.08
NCDNQ9UBB6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.04■■■□□ 2.08
NCDNQ9UBB6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28■■■□□ 2.07
NCDNQ9UBB6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28■■■□□ 2.07
NCDNQ9UBB6 AC145285.7-201ENST00000614819 1539 ntBASIC28■■■□□ 2.07
NCDNQ9UBB6 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28■■■□□ 2.07
NCDNQ9UBB6 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.98■■■□□ 2.07
NCDNQ9UBB6 ZNRF2P2-203ENST00000454624 420 ntBASIC27.97■■■□□ 2.07
NCDNQ9UBB6 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
NCDNQ9UBB6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.96■■■□□ 2.07
NCDNQ9UBB6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
NCDNQ9UBB6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.96■■■□□ 2.07
NCDNQ9UBB6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC27.96■■■□□ 2.07
NCDNQ9UBB6 AC005559.1-201ENST00000589661 871 ntBASIC27.95■■■□□ 2.06
NCDNQ9UBB6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.94■■■□□ 2.06
NCDNQ9UBB6 MIR762-201ENST00000390236 83 ntBASIC27.93■■■□□ 2.06
NCDNQ9UBB6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
NCDNQ9UBB6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.9■■■□□ 2.06
NCDNQ9UBB6 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC27.9■■■□□ 2.06
NCDNQ9UBB6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC27.89■■■□□ 2.06
NCDNQ9UBB6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
NCDNQ9UBB6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC27.88■■■□□ 2.05
NCDNQ9UBB6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
NCDNQ9UBB6 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
NCDNQ9UBB6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
NCDNQ9UBB6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
NCDNQ9UBB6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.84■■■□□ 2.05
NCDNQ9UBB6 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
NCDNQ9UBB6 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
NCDNQ9UBB6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC27.83■■■□□ 2.04
NCDNQ9UBB6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
NCDNQ9UBB6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
NCDNQ9UBB6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC27.81■■■□□ 2.04
NCDNQ9UBB6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.8■■■□□ 2.04
NCDNQ9UBB6 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NCDNQ9UBB6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
NCDNQ9UBB6 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.78■■■□□ 2.04
NCDNQ9UBB6 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
NCDNQ9UBB6 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC27.77■■■□□ 2.04
NCDNQ9UBB6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.76■■■□□ 2.03
NCDNQ9UBB6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
NCDNQ9UBB6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
NCDNQ9UBB6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC27.73■■■□□ 2.03
NCDNQ9UBB6 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
NCDNQ9UBB6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.72■■■□□ 2.03
NCDNQ9UBB6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
NCDNQ9UBB6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
NCDNQ9UBB6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.71■■■□□ 2.03
NCDNQ9UBB6 MIR4449-201ENST00000578365 66 ntBASIC27.7■■■□□ 2.02
NCDNQ9UBB6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.7■■■□□ 2.02
NCDNQ9UBB6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
NCDNQ9UBB6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
NCDNQ9UBB6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
NCDNQ9UBB6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC27.67■■■□□ 2.02
NCDNQ9UBB6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
NCDNQ9UBB6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC27.64■■■□□ 2.01
NCDNQ9UBB6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
NCDNQ9UBB6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.63■■■□□ 2.01
NCDNQ9UBB6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.6■■■□□ 2.01
NCDNQ9UBB6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
NCDNQ9UBB6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
NCDNQ9UBB6 MIR639-201ENST00000384974 98 ntBASIC27.58■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms