Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
UBE2OQ9C0C9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
UBE2OQ9C0C9 MIR3665-201ENST00000578708 105 ntBASIC31.39■■■□□ 2.62
UBE2OQ9C0C9 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
UBE2OQ9C0C9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.36■■■□□ 2.61
UBE2OQ9C0C9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
UBE2OQ9C0C9 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
UBE2OQ9C0C9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.35■■■□□ 2.61
UBE2OQ9C0C9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
UBE2OQ9C0C9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.33■■■□□ 2.61
UBE2OQ9C0C9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.33■■■□□ 2.61
UBE2OQ9C0C9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC31.27■■■□□ 2.6
UBE2OQ9C0C9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
UBE2OQ9C0C9 AC087741.3-201ENST00000624270 1347 ntBASIC31.24■■■□□ 2.59
UBE2OQ9C0C9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
UBE2OQ9C0C9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
UBE2OQ9C0C9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.22■■■□□ 2.59
UBE2OQ9C0C9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
UBE2OQ9C0C9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
UBE2OQ9C0C9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
UBE2OQ9C0C9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.17■■■□□ 2.58
UBE2OQ9C0C9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.17■■■□□ 2.58
UBE2OQ9C0C9 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
UBE2OQ9C0C9 AL133380.1-201ENST00000506013 324 ntBASIC31.16■■■□□ 2.58
UBE2OQ9C0C9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
UBE2OQ9C0C9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.15■■■□□ 2.58
UBE2OQ9C0C9 AC044849.2-201ENST00000606596 710 ntBASIC31.15■■■□□ 2.58
UBE2OQ9C0C9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.14■■■□□ 2.58
UBE2OQ9C0C9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
UBE2OQ9C0C9 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 DUX4L28-201ENST00000623687 678 ntBASIC31.12■■■□□ 2.57
UBE2OQ9C0C9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
UBE2OQ9C0C9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.1■■■□□ 2.57
UBE2OQ9C0C9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
UBE2OQ9C0C9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.08■■■□□ 2.57
UBE2OQ9C0C9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
UBE2OQ9C0C9 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
UBE2OQ9C0C9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
UBE2OQ9C0C9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
UBE2OQ9C0C9 ZNRF2P2-203ENST00000454624 420 ntBASIC31.01■■■□□ 2.55
UBE2OQ9C0C9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.01■■■□□ 2.55
UBE2OQ9C0C9 AC145285.7-201ENST00000614819 1539 ntBASIC30.99■■■□□ 2.55
UBE2OQ9C0C9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
UBE2OQ9C0C9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.99■■■□□ 2.55
UBE2OQ9C0C9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
UBE2OQ9C0C9 CHML-205ENST00000638160 705 ntTSL 3 BASIC30.98■■■□□ 2.55
UBE2OQ9C0C9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
UBE2OQ9C0C9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
UBE2OQ9C0C9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.94■■■□□ 2.54
UBE2OQ9C0C9 AC005559.1-201ENST00000589661 871 ntBASIC30.92■■■□□ 2.54
UBE2OQ9C0C9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 MIR762-201ENST00000390236 83 ntBASIC30.91■■■□□ 2.54
UBE2OQ9C0C9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.89■■■□□ 2.54
UBE2OQ9C0C9 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
UBE2OQ9C0C9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
UBE2OQ9C0C9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
UBE2OQ9C0C9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
UBE2OQ9C0C9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
UBE2OQ9C0C9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
UBE2OQ9C0C9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.85■■■□□ 2.53
UBE2OQ9C0C9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
UBE2OQ9C0C9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.82■■■□□ 2.52
UBE2OQ9C0C9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
UBE2OQ9C0C9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC30.82■■■□□ 2.52
UBE2OQ9C0C9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.8■■■□□ 2.52
UBE2OQ9C0C9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
UBE2OQ9C0C9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
UBE2OQ9C0C9 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.77■■■□□ 2.52
UBE2OQ9C0C9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC30.77■■■□□ 2.52
UBE2OQ9C0C9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
UBE2OQ9C0C9 MIR4449-201ENST00000578365 66 ntBASIC30.74■■■□□ 2.51
UBE2OQ9C0C9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
UBE2OQ9C0C9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.72■■■□□ 2.51
UBE2OQ9C0C9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.72■■■□□ 2.51
UBE2OQ9C0C9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC30.72■■■□□ 2.51
UBE2OQ9C0C9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
UBE2OQ9C0C9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.7■■■□□ 2.5
UBE2OQ9C0C9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC30.69■■■□□ 2.5
UBE2OQ9C0C9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
UBE2OQ9C0C9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
UBE2OQ9C0C9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
UBE2OQ9C0C9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
UBE2OQ9C0C9 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
UBE2OQ9C0C9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
UBE2OQ9C0C9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBE2OQ9C0C9 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
UBE2OQ9C0C9 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.62■■■□□ 2.49
UBE2OQ9C0C9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
UBE2OQ9C0C9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
UBE2OQ9C0C9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.58■■■□□ 2.49
UBE2OQ9C0C9 MIR639-201ENST00000384974 98 ntBASIC30.58■■■□□ 2.49
UBE2OQ9C0C9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms